BLASTX nr result

ID: Atractylodes21_contig00010825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010825
         (2371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25907.3| unnamed protein product [Vitis vinifera]              294   8e-77
ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containin...   293   1e-76
ref|XP_003635573.1| PREDICTED: uncharacterized protein LOC100853...   291   4e-76
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   244   7e-72
emb|CBI38493.3| unnamed protein product [Vitis vinifera]              277   8e-72

>emb|CBI25907.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  294 bits (752), Expect = 8e-77
 Identities = 164/303 (54%), Positives = 207/303 (68%), Gaps = 15/303 (4%)
 Frame = +2

Query: 92  GSSDKTVKFWDLETFELIGSTRTEATGVRIVTFHPDGRTIFCGLDSSLKVYSWEPVICHD 271
           GS+D+TVKFWDLETFELIGS R EATGVR +TFHPDGRT+FCGLD SLKVYSWEPV+CHD
Sbjct: 7   GSADRTVKFWDLETFELIGSARPEATGVRSITFHPDGRTLFCGLDDSLKVYSWEPVVCHD 66

Query: 272 ALDMGWSTLGDLRIDDGKLLGCSYYQNSVAIWVADTTHIQQHGHNILAEENTRMQPKCNL 451
           A+DMGWS LGD+ I +GKLLGCSYY+NSV +WVAD + I+ +G  +L+++N  ++ K +L
Sbjct: 67  AVDMGWSILGDICIHEGKLLGCSYYRNSVGVWVADISQIEPYGSGLLSKKNGCVERKFDL 126

Query: 452 QEG-LTERFGSTRRST-----MSPDDDTKDIKNIYVDTAGMTPVASRKVGS--SPTVANL 607
           QE    E+ GS+ RST     MSPD DTK+IKNIYVD++G   VAS+KV S  +P V   
Sbjct: 127 QESHSVEKVGSSVRSTSGFRSMSPDYDTKEIKNIYVDSSGGNSVASQKVRSFNTPKVLFP 186

Query: 608 PNPKEVNDLATRKQVP----PAKIIGQANGNSFFMPGIVPHDNS-AKDSAKSRTESIANE 772
            + KE+ +L T+K  P     AK  G+A   SF +P IV  DNS  KD A SR ESI   
Sbjct: 187 SDSKEITNLPTQKHSPGVGLHAKTQGRAITRSFVVPSIVTRDNSDGKDLANSRRESITPA 246

Query: 773 QDITAVSLKPPHRRRPSTTKLDIEGLTITVESGLKSGI--DTATATATNFQKRLLAEAPA 946
           +  T +SLK  H RRPS +K + E L + VESG    +  D  +A   NF  RL+ +  A
Sbjct: 247 RANTGMSLKTSHIRRPSNSKYEAERLLMAVESGSFDSMPNDLDSAMKQNFHSRLVVDDEA 306

Query: 947 KDS 955
            +S
Sbjct: 307 SES 309


>ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Vitis vinifera]
          Length = 545

 Score =  293 bits (751), Expect = 1e-76
 Identities = 164/303 (54%), Positives = 207/303 (68%), Gaps = 15/303 (4%)
 Frame = +2

Query: 92   GSSDKTVKFWDLETFELIGSTRTEATGVRIVTFHPDGRTIFCGLDSSLKVYSWEPVICHD 271
            GS+D+TVKFWDLETFELIGS R EATGVR +TFHPDGRT+FCGLD SLKVYSWEPV+CHD
Sbjct: 213  GSADRTVKFWDLETFELIGSARPEATGVRSITFHPDGRTLFCGLDDSLKVYSWEPVVCHD 272

Query: 272  ALDMGWSTLGDLRIDDGKLLGCSYYQNSVAIWVADTTHIQQHGHNILAEENTRMQPKCNL 451
            A+DMGWS LGD+ I +GKLLGCSYY+NSV +WVAD + I+ +G  +L+++N  ++ K +L
Sbjct: 273  AVDMGWSILGDICIHEGKLLGCSYYRNSVGVWVADISKIEPYGSGLLSKKNGCVERKFDL 332

Query: 452  QEG-LTERFGSTRRST-----MSPDDDTKDIKNIYVDTAGMTPVASRKVGS--SPTVANL 607
            QE    E+ GS+ RST     MSPD DTK+IKNIYVD++G   VAS+KV S  +P V   
Sbjct: 333  QESHSVEKVGSSVRSTSGFRSMSPDYDTKEIKNIYVDSSGGNSVASQKVRSFNTPKVLFP 392

Query: 608  PNPKEVNDLATRKQVP----PAKIIGQANGNSFFMPGIVPHDNS-AKDSAKSRTESIANE 772
             + KE+ +L T+K  P     AK  G+A   SF +P IV  DNS  KD A SR ESI   
Sbjct: 393  SDSKEITNLPTQKHSPGVGLHAKTQGRAITRSFVVPSIVTRDNSDGKDLANSRRESITPA 452

Query: 773  QDITAVSLKPPHRRRPSTTKLDIEGLTITVESGLKSGI--DTATATATNFQKRLLAEAPA 946
            +  T +SLK  H RRPS +K + E L + VESG    +  D  +A   NF  RL+ +  A
Sbjct: 453  RANTGMSLKTSHIRRPSNSKYEAERLLMAVESGSFDSMPNDLDSAMKQNFHSRLVVDDEA 512

Query: 947  KDS 955
             +S
Sbjct: 513  SES 515


>ref|XP_003635573.1| PREDICTED: uncharacterized protein LOC100853117, partial [Vitis
           vinifera]
          Length = 332

 Score =  291 bits (746), Expect = 4e-76
 Identities = 163/302 (53%), Positives = 206/302 (68%), Gaps = 15/302 (4%)
 Frame = +2

Query: 95  SSDKTVKFWDLETFELIGSTRTEATGVRIVTFHPDGRTIFCGLDSSLKVYSWEPVICHDA 274
           S+D+TVKFWDLETFELIGS R EATGVR +TFHPDGRT+FCGLD SLKVYSWEPV+CHDA
Sbjct: 1   SADRTVKFWDLETFELIGSARPEATGVRSITFHPDGRTLFCGLDDSLKVYSWEPVVCHDA 60

Query: 275 LDMGWSTLGDLRIDDGKLLGCSYYQNSVAIWVADTTHIQQHGHNILAEENTRMQPKCNLQ 454
           +DMGWS LGD+ I +GKLLGCSYY+NSV +WVAD + I+ +G  +L+++N  ++ K +LQ
Sbjct: 61  VDMGWSILGDICIHEGKLLGCSYYRNSVGVWVADISQIEPYGSGLLSKKNGCVERKFDLQ 120

Query: 455 EG-LTERFGSTRRST-----MSPDDDTKDIKNIYVDTAGMTPVASRKVGS--SPTVANLP 610
           E    E+ GS+ RST     MSPD DTK+IKNIYVD++G   VAS+KV S  +P V    
Sbjct: 121 ESHSVEKVGSSVRSTSGFRSMSPDYDTKEIKNIYVDSSGGNSVASQKVRSFNTPKVLFPS 180

Query: 611 NPKEVNDLATRKQVP----PAKIIGQANGNSFFMPGIVPHDNS-AKDSAKSRTESIANEQ 775
           + KE+ +L T+K  P     AK  G+A   SF +P IV  DNS  KD A SR ESI   +
Sbjct: 181 DSKEITNLPTQKHSPGVGLHAKTQGRAITRSFVVPSIVTRDNSDGKDLANSRRESITPAR 240

Query: 776 DITAVSLKPPHRRRPSTTKLDIEGLTITVESGLKSGI--DTATATATNFQKRLLAEAPAK 949
             T +SLK  H RRPS +K + E L + VESG    +  D  +A   NF  RL+ +  A 
Sbjct: 241 ANTGMSLKTSHIRRPSNSKYEAERLLMAVESGSFDSMPNDLDSAMKQNFHSRLVVDDEAS 300

Query: 950 DS 955
           +S
Sbjct: 301 ES 302


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 824

 Score =  244 bits (623), Expect(2) = 7e-72
 Identities = 140/301 (46%), Positives = 182/301 (60%), Gaps = 13/301 (4%)
 Frame = +2

Query: 92   GSSDKTVKFWDLETFELIGSTRTEATGVRIVTFHPDGRTIFCGLDSSLKVYSWEPVICHD 271
            GS+D+TVKFWDLETFELIGS R EATGVR + FHPDGR +F G +  LKVYSWEPVICHD
Sbjct: 202  GSADRTVKFWDLETFELIGSARPEATGVRSIAFHPDGRALFTGHEDGLKVYSWEPVICHD 261

Query: 272  ALDMGWSTLGDLRIDDGKLLGCSYYQNSVAIWVADTTHIQQHGHNILAEENTRMQPKCNL 451
             +DMGW+TLGDL I DGKLLGCS+Y+NSV +WVAD + I+ +G  +  ++N   + K  L
Sbjct: 262  TIDMGWTTLGDLCIHDGKLLGCSFYRNSVGVWVADISLIEPYGTGLDPKKNESTEQKLGL 321

Query: 452  QEGLTER----FGSTRRSTMSPDDDTKDIKNIYVDTAGMTPVASRKVGS-SPTVANLPNP 616
            Q    E+     G T  S     D++K+IKNIY+D++G  PV  ++ GS S T  +LP  
Sbjct: 322  QGSKLEKVEVNVGPTSGSRSMSPDESKEIKNIYIDSSGGKPVTLQRSGSLSSTKVDLPEE 381

Query: 617  -KEVNDLATRKQVPP----AKIIGQANGNSFFMPGIVPHDN-SAKDSAKSRTESIANEQD 778
             KE+ +L T KQ P      K   QA   SF  P IVP D    K SAKS  E+I   + 
Sbjct: 382  FKEICNLGTMKQSPATGARVKSNEQAIRKSFIAPNIVPRDTPDGKVSAKSEKETITFSKT 441

Query: 779  ITAVSLKPPHRRRPSTTKLDIEGLTITVESG--LKSGIDTATATATNFQKRLLAEAPAKD 952
               + L+P H RR ST + D++  +  V SG    + I   +     FQ  L ++   K+
Sbjct: 442  KPGMLLRPAHVRRASTGRFDVDRFSEDVNSGTFCDTAIKLDSTKEPKFQPNLGSQNEVKE 501

Query: 953  S 955
            S
Sbjct: 502  S 502



 Score = 55.5 bits (132), Expect(2) = 7e-72
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
 Frame = +3

Query: 1071 KDLKSVKYVNGVAVVHGRTRSLVERFEKREKLNTDDECQTPDLAAHILTNTDRPTTLVKQ 1250
            +++  VKYVNGVAVV GRTRSLVERFE+R+K+  +++  T  L      N  R     + 
Sbjct: 539  EEISPVKYVNGVAVVRGRTRSLVERFERRDKIQINEDQTTVFLPT---INETREKVHNED 595

Query: 1251 ALNAVPCAIPEAKTSPVRVKTPDVVPFEE------PEAKISQMQVKLPDVVPCEE---PE 1403
             + A P        +PV  +  + +PF E      P  K      K P+ V  E     E
Sbjct: 596  QIKASP--------TPVVFERRERIPFNEDRNNLPPLPKTISETDKSPNTVKVEPQIYKE 647

Query: 1404 DITSQMQVKI 1433
            D  S  + KI
Sbjct: 648  DSNSANEEKI 657



 Score =  171 bits (434), Expect = 6e-40
 Identities = 88/163 (53%), Positives = 109/163 (66%)
 Frame = +3

Query: 1881 RMIPEKAKSSPLLDDGPQTTGRGLTSKKDDDLVEDLMLTHDVFLSSLRTRLTKLQVVRHF 2060
            + I E  KS   +   PQ       S  ++ ++E LM THD  LS+LR+RLTKLQVVRHF
Sbjct: 626  KTISETDKSPNTVKVEPQIYKEDSNSANEEKIIEGLMQTHDATLSNLRSRLTKLQVVRHF 685

Query: 2061 WERNDARGAINALRNLPDHAVQADVVNVLMERMESITXXXXXXXXXXXXXXXXXXTERHV 2240
            WERND +GA NALR LPDH+VQADV++VL+ERME  T                   ERHV
Sbjct: 686  WERNDIKGATNALRKLPDHSVQADVISVLVERMEIFTLDLFSCLLPVLTGLLDSKIERHV 745

Query: 2241 SASLELLLKLVAVFGPVVSSTISAPPTVGVDLHAEKRLECCNQ 2369
              SL++LLK+VAVFGP V +T+SAPP+VGVDLH E+R ECCN+
Sbjct: 746  KVSLDMLLKVVAVFGPTVLATVSAPPSVGVDLHQEERRECCNK 788


>emb|CBI38493.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  277 bits (709), Expect = 8e-72
 Identities = 156/297 (52%), Positives = 194/297 (65%), Gaps = 9/297 (3%)
 Frame = +2

Query: 92   GSSDKTVKFWDLETFELIGSTRTEATGVRIVTFHPDGRTIFCGLDSSLKVYSWEPVICHD 271
            GS+D+TVKFWDLETFELIGS R EATGVR +TFHPDGRT+FCGLD SLKVYSWEPV+CHD
Sbjct: 202  GSADRTVKFWDLETFELIGSARPEATGVRSITFHPDGRTLFCGLDDSLKVYSWEPVVCHD 261

Query: 272  ALDMGWSTLGDLRIDDGKLLGCSYYQNSVAIWVADTTHIQQHGHNILAEENTRMQPKCNL 451
            A+DMGWS LGD+ I +GKLLGCSYY+NSV +WVAD + I+ +G  +L+++N  ++ K +L
Sbjct: 262  AVDMGWSILGDICIHEGKLLGCSYYRNSVGVWVADISKIEPYGSGLLSKKNGCVERKFDL 321

Query: 452  QEG-LTERFGSTRRST-----MSPDDDTKDIKNIYVDTAGMTPVASRKVGSSPTVANLPN 613
            QE    E+ GS+ RST     MSPD DTK+IKNIYVD++G   VAS+KV S  T      
Sbjct: 322  QESHSVEKVGSSVRSTSGFRSMSPDYDTKEIKNIYVDSSGGNSVASQKVRSFNT------ 375

Query: 614  PKEVNDLATRKQVPPAKIIGQANGNSFFMPGIVPHDNS-AKDSAKSRTESIANEQDITAV 790
                            K  G+A   SF +P IV  DNS  KD A SR ESI   +  T +
Sbjct: 376  ---------------PKTQGRAITRSFVVPSIVTRDNSDGKDLANSRRESITPARANTGM 420

Query: 791  SLKPPHRRRPSTTKLDIEGLTITVESGLKSGI--DTATATATNFQKRLLAEAPAKDS 955
            SLK  H RRPS +K + E L + VESG    +  D  +A   NF  RL+ +  A +S
Sbjct: 421  SLKTSHIRRPSNSKYEAERLLMAVESGSFDSMPNDLDSAMKQNFHSRLVVDDEASES 477


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