BLASTX nr result

ID: Atractylodes21_contig00010776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010776
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    93   3e-17
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    88   9e-16
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    85   1e-14
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    82   6e-14
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    82   8e-14

>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
 Frame = +1

Query: 4   LIFSTDSGRNIWSCPVYDVLNDKTVNALYHGYPLKS---HVWMAGSCNGLLCIAIEEEXX 174
           ++ +T +  ++ SC +  + N+ +  +    YP+K+   H  + GSCNGLLC AI+ +  
Sbjct: 65  ILSATTAEFHLKSCSITSLFNNPSTVSDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDC- 123

Query: 175 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPLFIWNPITRRSIRIP-VSLFERVG----FGF 339
                                        + +WNP  R S + P +    R G    FG 
Sbjct: 124 -----------------------------VLLWNPSIRVSKKSPPLGNNWRPGCFTCFGL 154

Query: 340 GYDESTDDYKVVVIYFCSEDGFEYDVSVMIYSLKSGNWKKIGVFPRGIP--LNGIGTFFS 513
           GYD   DDYKVV + FC  + F  +  V +YS+ +  W+KI  FP G+    N  G F S
Sbjct: 155 GYDHVNDDYKVVAV-FCDPNEFFSESKVKVYSMATNTWRKIHDFPHGVSPYQNSSGKFVS 213

Query: 514 GALHWTNRSDVGSSYSWTIV 573
           G L+W +   +GSS  WTIV
Sbjct: 214 GTLNWASNYSIGSSSFWTIV 233


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
 Frame = +1

Query: 4   LIFSTDSGRNIWSCPVYDVLNDKTVNALYHGYPLKS---HVWMAGSCNGLLCIAIEEEXX 174
           ++ +T +  ++ SC +  + N+ +       YP+K+   H  + GSCNGLLC AI+ +  
Sbjct: 105 ILSATTAEFHLKSCSLSSLFNNLSTVCDELNYPVKNKFRHDGIVGSCNGLLCFAIKGDC- 163

Query: 175 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPLFIWNPITRRSIRIP-VSLFERVG----FGF 339
                                        + +WNP  R S + P +    R G    FG 
Sbjct: 164 -----------------------------VLLWNPSIRVSKKSPPLGNNWRPGCFTAFGL 194

Query: 340 GYDESTDDYKVVVIYFCSEDGFEYDVSVMIYSLKSGNWKKIGVFPRGI-PLNGIGTFFSG 516
           GYD   +DYKVV + FC    +  +  V +YS+ + +W+KI  FP G  P    G F SG
Sbjct: 195 GYDHVNEDYKVVAV-FCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSG 253

Query: 517 ALHWTNRSDVGSSYSWTIV 573
            L+W     +GSS  W IV
Sbjct: 254 TLNWAANHSIGSSSLWVIV 272


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
 Frame = +1

Query: 4   LIFSTDSGRNIWSCPVYDVLNDKTVNALYH-GYPLKS---HVWMAGSCNGLLCIAIEEEX 171
           ++ +T +  ++ SC +  + N+ +        YP+K+   H  + GSCNGLLC AI+ + 
Sbjct: 105 ILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDC 164

Query: 172 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLFIWNPITRRSIRIP-VSLFERVG----FG 336
                                         + +WNP  R S + P +    R G    FG
Sbjct: 165 ------------------------------VLLWNPSIRVSKKSPPLGNNWRPGCFTAFG 194

Query: 337 FGYDESTDDYKVVVIYFCSEDGFEYDVSVMIYSLKSGNWKKIGVFPRG-IPLNGIGTFFS 513
            GYD   +DYKVV + FC    +  +  V +YS+ + +W+KI  FP G +P    G F S
Sbjct: 195 LGYDHVNEDYKVVAV-FCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVS 253

Query: 514 GALHWTNRSDVGSSYSWTIV 573
           G L+W     +G S  W IV
Sbjct: 254 GTLNWAANHSIGPSSFWVIV 273


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
 Frame = +1

Query: 1   RLIFSTDSGRNIWSCPVYDVLNDKTVNALYH-GYPLKS---HVWMAGSCNGLLCIAIEEE 168
           R+IF  +S  N   C +  +LN +    L+  G P+++   + W+ GS NGL+C+  + E
Sbjct: 63  RIIFQ-ESACNFKVCCLPSMLNKERSTELFDIGSPMENPTIYTWIVGSVNGLICLYSKIE 121

Query: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLFIWNPITRRSIRIPV-------SLFERV 327
                                            +WNP  ++S ++P             +
Sbjct: 122 ETV------------------------------LWNPAVKKSKKLPTLGAKLRNGCSYYL 151

Query: 328 GFGFGYDESTDDYKVVVIYFCSEDGFEYDVSVMIYSLKSGNWKKIGVFPRGIPLNGIGTF 507
            +GFGYDE+ DDYKVVVI    ED    D  V IYSLK+ +W+ I  F     +N  G F
Sbjct: 152 KYGFGYDETRDDYKVVVIQCIYEDSGSCDSVVNIYSLKADSWRTINKFQGNFLVNSPGKF 211

Query: 508 FSGALHWTNRSDV 546
            +G ++W   +DV
Sbjct: 212 VNGKIYWALSADV 224


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
 Frame = +1

Query: 97  YPLKSHVWMAGSCNGLLCIAIEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLFIWN 276
           YP  S++ + GSCNGL+C  I +                                ++IWN
Sbjct: 96  YPEYSYIEILGSCNGLVCGLIHDNPL-----------------------------IYIWN 126

Query: 277 PITR--RSIRIPVSLFERVGFGFGYDESTDDYKVVVIYFC----SEDGFEYDVSVMIYSL 438
           P TR  R + IP S  +   +GFGYD   DDYK+V +       S DG   +  V +++L
Sbjct: 127 PSTRESRELAIPGSSEDDAFYGFGYDVKLDDYKIVRVSISTSTNSTDGSNSETKVEVFTL 186

Query: 439 KSGNWKKIGVFPRGIPLNGIGTFFSGALHWTNRSDVGSSYSWTIV 573
           KS  W+ I      + L G GT  +GALHW  R + G S    +V
Sbjct: 187 KSNIWRTIQDLRCSVLLEGPGTLANGALHWLVRQENGGSKKCVMV 231


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