BLASTX nr result

ID: Atractylodes21_contig00010751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010751
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66341.1| hypothetical protein VITISV_018558 [Vitis vinifera]   199   4e-49
ref|XP_002266305.1| PREDICTED: uncharacterized protein At4g28440...   199   5e-49
ref|NP_564202.1| OB-fold nucleic acid binding domain-containing ...   197   2e-48
ref|XP_002890593.1| predicted protein [Arabidopsis lyrata subsp....   197   2e-48
gb|ABK21025.1| unknown [Picea sitchensis] gi|224284499|gb|ACN399...   197   2e-48

>emb|CAN66341.1| hypothetical protein VITISV_018558 [Vitis vinifera]
          Length = 137

 Score =  199 bits (506), Expect = 4e-49
 Identities = 101/136 (74%), Positives = 118/136 (86%), Gaps = 3/136 (2%)
 Frame = -3

Query: 499 MAEQNK--QQPAFTKIDQLRPGAIGLNLTVKVVSSKMIMTRGR-NGTQGRNMRLAECLVG 329
           MAE     ++P FTKI+QLRPG  G  LTVKVVSSKM++ +GR +G Q R MR+AECLVG
Sbjct: 1   MAESKSGLRKPVFTKIEQLRPGTXGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVG 60

Query: 328 DETGIIVFTARNDQVDAMKEGSTVILRNAKIDMYKGSMRLAVDKWGRVEVTEPAAFSVKE 149
           DETG+I+FTARNDQVD MKEGSTV+LRNAKIDM+KGSMRLAVDKWGRVEVTEPA+FSVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKE 120

Query: 148 DSNLSLIEFELITVEE 101
           D+NLSL+E+EL+ V E
Sbjct: 121 DNNLSLVEYELVNVVE 136


>ref|XP_002266305.1| PREDICTED: uncharacterized protein At4g28440 isoform 2 [Vitis
           vinifera] gi|225425513|ref|XP_002266183.1| PREDICTED:
           uncharacterized protein At4g28440 isoform 1 [Vitis
           vinifera] gi|297739026|emb|CBI28515.3| unnamed protein
           product [Vitis vinifera]
          Length = 137

 Score =  199 bits (505), Expect = 5e-49
 Identities = 101/136 (74%), Positives = 118/136 (86%), Gaps = 3/136 (2%)
 Frame = -3

Query: 499 MAEQNK--QQPAFTKIDQLRPGAIGLNLTVKVVSSKMIMTRGR-NGTQGRNMRLAECLVG 329
           MAE     ++P FTKI+QLRPG  G  LTVKVVSSKM++ +GR +G Q R MR+AECLVG
Sbjct: 1   MAESKSGLRKPVFTKIEQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVG 60

Query: 328 DETGIIVFTARNDQVDAMKEGSTVILRNAKIDMYKGSMRLAVDKWGRVEVTEPAAFSVKE 149
           DETG+I+FTARNDQVD MKEGSTV+LRNAKIDM+KGSMRLAVDKWGRVEVTEPA+FSVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKE 120

Query: 148 DSNLSLIEFELITVEE 101
           D+NLSL+E+EL+ V E
Sbjct: 121 DNNLSLVEYELVNVVE 136


>ref|NP_564202.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
           thaliana] gi|4056457|gb|AAC98030.1| ESTs gb|234051 and
           gb|F13722 come from this gene [Arabidopsis thaliana]
           gi|21553633|gb|AAM62726.1| unknown [Arabidopsis
           thaliana] gi|27754651|gb|AAO22770.1| unknown protein
           [Arabidopsis thaliana] gi|28394047|gb|AAO42431.1|
           unknown protein [Arabidopsis thaliana]
           gi|332192307|gb|AEE30428.1| OB-fold nucleic acid binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 137

 Score =  197 bits (500), Expect = 2e-48
 Identities = 97/137 (70%), Positives = 118/137 (86%), Gaps = 4/137 (2%)
 Frame = -3

Query: 499 MAEQNK---QQPAFTKIDQLRPGAIGLNLTVKVVSSKMIMTRGR-NGTQGRNMRLAECLV 332
           MA+  K   ++PAFTK+DQLRPG  G N+ VK+VS+KM++ +GR +G Q R +R++EC+V
Sbjct: 1   MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60

Query: 331 GDETGIIVFTARNDQVDAMKEGSTVILRNAKIDMYKGSMRLAVDKWGRVEVTEPAAFSVK 152
           GDETG+IVFTARNDQVD MKEGSTV LRNAKIDMYKGSMRLAVDKWGRVEVTEPA+F VK
Sbjct: 61  GDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVK 120

Query: 151 EDSNLSLIEFELITVEE 101
           ED+N+SLIE+EL+ V E
Sbjct: 121 EDTNMSLIEYELVNVVE 137


>ref|XP_002890593.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336435|gb|EFH66852.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score =  197 bits (500), Expect = 2e-48
 Identities = 95/133 (71%), Positives = 116/133 (87%), Gaps = 1/133 (0%)
 Frame = -3

Query: 496 AEQNKQQPAFTKIDQLRPGAIGLNLTVKVVSSKMIMTRGR-NGTQGRNMRLAECLVGDET 320
           A+   ++PAFTK+DQLRPG  G N+ VK+VS+KM++ +GR +G Q R +R++EC+VGDET
Sbjct: 5   AKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDET 64

Query: 319 GIIVFTARNDQVDAMKEGSTVILRNAKIDMYKGSMRLAVDKWGRVEVTEPAAFSVKEDSN 140
           G+IVFTARNDQVD MKEGSTV LRNAKIDMYKGSMRLAVDKWGRVEVTEPA+F VKED+N
Sbjct: 65  GVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDTN 124

Query: 139 LSLIEFELITVEE 101
           +SLIE+EL+ V E
Sbjct: 125 MSLIEYELVNVVE 137


>gb|ABK21025.1| unknown [Picea sitchensis] gi|224284499|gb|ACN39983.1| unknown
           [Picea sitchensis]
          Length = 140

 Score =  197 bits (500), Expect = 2e-48
 Identities = 93/129 (72%), Positives = 114/129 (88%)
 Frame = -3

Query: 487 NKQQPAFTKIDQLRPGAIGLNLTVKVVSSKMIMTRGRNGTQGRNMRLAECLVGDETGIIV 308
           N ++P FTKIDQLRPG  G NL VKV S+K+++ +GR  +Q R MR+AECL+GDETGI++
Sbjct: 11  NLRKPVFTKIDQLRPGTSGHNLIVKVTSAKIVLQKGRPDSQVRQMRIAECLIGDETGIVI 70

Query: 307 FTARNDQVDAMKEGSTVILRNAKIDMYKGSMRLAVDKWGRVEVTEPAAFSVKEDSNLSLI 128
           FTARN+QVD MKEGSTVILRNAKIDM+KGSMRLAVDKWGR+EVTEPA FSVKE++NLSL+
Sbjct: 71  FTARNEQVDLMKEGSTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPAEFSVKEENNLSLV 130

Query: 127 EFELITVEE 101
           E+EL+ V+E
Sbjct: 131 EYELVNVQE 139


Top