BLASTX nr result

ID: Atractylodes21_contig00010658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010658
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   418   e-114
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   407   e-111
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   394   e-107
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   387   e-105
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...   387   e-105

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
            vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
            product [Vitis vinifera]
          Length = 335

 Score =  418 bits (1075), Expect = e-114
 Identities = 225/343 (65%), Positives = 256/343 (74%), Gaps = 2/343 (0%)
 Frame = +1

Query: 100  TILLQNLPPIPSSAPTLRYRTRSRRSHTLVCVLASSNTDKPKFKPKTRIKIKEPDDYHAT 279
            ++LL +LPP P S       T   RSH     L   +T  P      R +    DDYHAT
Sbjct: 3    SLLLHHLPPTPLST------TIKIRSHPKPSSLVQGSTRTPLCITCARSQ----DDYHAT 52

Query: 280  LKALNSKGRIPRKALGQHYMLNGEVNEQLVYAANVGDGDVVLEIGPGTGSLTNVLVDSGA 459
            L ALNSKGR PRK+LGQHYMLN  +NEQL   A++ DGDV+LEIGPGTGSLTNVL+D+GA
Sbjct: 53   LDALNSKGRTPRKSLGQHYMLNSSINEQLADTADIRDGDVILEIGPGTGSLTNVLLDAGA 112

Query: 460  TILAIEKDPYMAALVRDRFASTHRVKVVQEDFTRCHLRXXXXXXXXXXXXXXXP--YAKV 633
            T+LAIEKD +MAALVR+RFA T R+KV+QEDF +CH+                   YAKV
Sbjct: 113  TVLAIEKDAHMAALVRERFAVTDRLKVLQEDFMKCHIHPHLFSLLESKKAKNKESRYAKV 172

Query: 634  VANIPFNISTDVVKQLLPMGDVFSXXXXXXXXXXXXRMVDSSLRTSEYRPINIFINFYSD 813
            V+NIPFNISTDVVK LLPMGD+FS            R+V++SLRT EYRPINIF+NFYSD
Sbjct: 173  VSNIPFNISTDVVKILLPMGDIFSEVVLLLQDETALRLVEASLRTQEYRPINIFVNFYSD 232

Query: 814  PEYKFKVPRENFFPQPKVDAAVVVFRLKQAVDYPQVSSIKSFFSMVNSAFNGKRKMLRKS 993
            PEYKFKVPR NFFPQP VDAAVVVF+LKQAVDYP VSSIKSFFS+VNSAFNGKRKMLR+S
Sbjct: 233  PEYKFKVPRTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNSAFNGKRKMLRRS 292

Query: 994  LQHITSSPEIEEALVNVGLLATSRPEELTLEDFVKLHNLIVDT 1122
            LQHI +S EIEEAL NVGL ATSRPEELTL+DFV+LHNLIV T
Sbjct: 293  LQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLIVKT 335


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
            gi|223548969|gb|EEF50458.1| dimethyladenosine
            transferase, putative [Ricinus communis]
          Length = 338

 Score =  407 bits (1046), Expect = e-111
 Identities = 218/340 (64%), Positives = 253/340 (74%), Gaps = 2/340 (0%)
 Frame = +1

Query: 100  TILLQNLPPIPSSAPTLRYRTRSRRSHTLVCVLASSNTDKPKFKPKTRIKIKEPDDYHAT 279
            T LLQ L  IP+     +    SR   T      S+   +   +  T+   +  DDY AT
Sbjct: 5    TNLLQPLASIPTLTVRAKPSVPSRNGIT------SARKKRVLIRCDTK---RSSDDYRAT 55

Query: 280  LKALNSKGRIPRKALGQHYMLNGEVNEQLVYAANVGDGDVVLEIGPGTGSLTNVLVDSGA 459
            LKALNS+GR PRK+LGQHYMLN EVNEQLV AANV +GD+VLEIGPGTGSLTN+L+D+GA
Sbjct: 56   LKALNSRGRRPRKSLGQHYMLNSEVNEQLVCAANVEEGDLVLEIGPGTGSLTNLLLDTGA 115

Query: 460  TILAIEKDPYMAALVRDRFASTHRVKVVQEDFTRCHLRXXXXXXXXXXXXXXXP--YAKV 633
            T+LAIEKD +MAA+VR+RF+ T R K++QEDF +CH+R                   AKV
Sbjct: 116  TVLAIEKDAHMAAIVRERFSHTDRFKLLQEDFVKCHIRFHMLSLLENMTSLNEKPRRAKV 175

Query: 634  VANIPFNISTDVVKQLLPMGDVFSXXXXXXXXXXXXRMVDSSLRTSEYRPINIFINFYSD 813
            VANIPFNISTDVVKQLLPMGD+ S            R+V+SSLRTSEYRPIN+F+NFYSD
Sbjct: 176  VANIPFNISTDVVKQLLPMGDIISEVALLLQEETASRLVESSLRTSEYRPINVFVNFYSD 235

Query: 814  PEYKFKVPRENFFPQPKVDAAVVVFRLKQAVDYPQVSSIKSFFSMVNSAFNGKRKMLRKS 993
            P YKFKVPR NFFPQP VDAAVV F+LKQ  DYP VSS KSFFS+VNSAFNGKRKMLR+S
Sbjct: 236  PVYKFKVPRSNFFPQPNVDAAVVTFKLKQTADYPAVSSSKSFFSLVNSAFNGKRKMLRRS 295

Query: 994  LQHITSSPEIEEALVNVGLLATSRPEELTLEDFVKLHNLI 1113
            LQHI +SPEIE+AL+NVGL ATSRPEELTL+DFVKLHNLI
Sbjct: 296  LQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLI 335


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Cucumis sativus]
          Length = 347

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/288 (68%), Positives = 233/288 (80%), Gaps = 2/288 (0%)
 Frame = +1

Query: 259  PDDYHATLKALNSKGRIPRKALGQHYMLNGEVNEQLVYAANVGDGDVVLEIGPGTGSLTN 438
            PDDYH+T++ALNSKGR+PRK+LGQHYMLN  +NEQL  AANV +GDVVLEIGPGTGSLTN
Sbjct: 58   PDDYHSTIRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTN 117

Query: 439  VLVDSGATILAIEKDPYMAALVRDRFASTHRVKVVQEDFTRCHL--RXXXXXXXXXXXXX 612
            VL++SGAT+LA+EKD YMA LV +RFA+T+R+KV+ EDF +C++                
Sbjct: 118  VLINSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSEA 177

Query: 613  XXPYAKVVANIPFNISTDVVKQLLPMGDVFSXXXXXXXXXXXXRMVDSSLRTSEYRPINI 792
                AKVV+NIPFNISTD++KQLLPMGD+FS            R+V++SLRTSEYRPIN+
Sbjct: 178  RSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINV 237

Query: 793  FINFYSDPEYKFKVPRENFFPQPKVDAAVVVFRLKQAVDYPQVSSIKSFFSMVNSAFNGK 972
            F+NFYSDPE KFKVPR NFFPQP VDAAVV F+LK+A DYP VSS KSFFSMVNSAFNGK
Sbjct: 238  FVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGK 297

Query: 973  RKMLRKSLQHITSSPEIEEALVNVGLLATSRPEELTLEDFVKLHNLIV 1116
            RKMLRKSLQHI +S EIE+AL +  LL TSRPEEL+L+DFVKLHNLIV
Sbjct: 298  RKMLRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIV 345


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  387 bits (994), Expect = e-105
 Identities = 209/342 (61%), Positives = 243/342 (71%), Gaps = 7/342 (2%)
 Frame = +1

Query: 109  LQNLPPIPSSAPTLRYRTRS-------RRSHTLVCVLASSNTDKPKFKPKTRIKIKEPDD 267
            LQ  PPI  +     ++          RR+  +VC    S           R   +  DD
Sbjct: 9    LQTFPPISHALLNRHHKPAHDSTAGVRRRTPYVVCAEKGS-----------RASTRSADD 57

Query: 268  YHATLKALNSKGRIPRKALGQHYMLNGEVNEQLVYAANVGDGDVVLEIGPGTGSLTNVLV 447
            YHATLKALNSKGR PRK+LGQHYMLN ++N+QL  AA V  GDVVLEIGPGTGSLTNVL+
Sbjct: 58   YHATLKALNSKGRFPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGSLTNVLL 117

Query: 448  DSGATILAIEKDPYMAALVRDRFASTHRVKVVQEDFTRCHLRXXXXXXXXXXXXXXXPYA 627
            +SGA +LA+EKD +MAALV +RF+ST ++KV+ ED  +CH+R                 A
Sbjct: 118  NSGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSINPESRK-A 176

Query: 628  KVVANIPFNISTDVVKQLLPMGDVFSXXXXXXXXXXXXRMVDSSLRTSEYRPINIFINFY 807
            KVVANIPFNISTDV+K LLPMGD+FS            R+V SSLRT EYRPIN+F+NFY
Sbjct: 177  KVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPINVFVNFY 236

Query: 808  SDPEYKFKVPRENFFPQPKVDAAVVVFRLKQAVDYPQVSSIKSFFSMVNSAFNGKRKMLR 987
            SDPEYK +VPR NFFPQP VDAAVV F+LK   +YPQVSS KSFFSMVNSAFN KRKMLR
Sbjct: 237  SDPEYKLEVPRTNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRKMLR 296

Query: 988  KSLQHITSSPEIEEALVNVGLLATSRPEELTLEDFVKLHNLI 1113
            KSLQHI +S EIEEAL ++GLLATSRPEELTL+DFVKLHNLI
Sbjct: 297  KSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLI 338


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  387 bits (993), Expect = e-105
 Identities = 198/287 (68%), Positives = 227/287 (79%)
 Frame = +1

Query: 253  KEPDDYHATLKALNSKGRIPRKALGQHYMLNGEVNEQLVYAANVGDGDVVLEIGPGTGSL 432
            +  DDYHATLKALNSKGR PRK+LGQHYMLN ++N+QL  AA V  GDVVLEIGPGTGSL
Sbjct: 53   RSADDYHATLKALNSKGRFPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGSL 112

Query: 433  TNVLVDSGATILAIEKDPYMAALVRDRFASTHRVKVVQEDFTRCHLRXXXXXXXXXXXXX 612
            TNVL++SGA +LA+EKD +MAALV +RF+ST ++KV+ ED  +CH+R             
Sbjct: 113  TNVLLNSGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSINPE 172

Query: 613  XXPYAKVVANIPFNISTDVVKQLLPMGDVFSXXXXXXXXXXXXRMVDSSLRTSEYRPINI 792
                AKVVANIPFNISTDV+K LLPMGD+FS            R+V SSLRT EYRP+N+
Sbjct: 173  SRK-AKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRPVNV 231

Query: 793  FINFYSDPEYKFKVPRENFFPQPKVDAAVVVFRLKQAVDYPQVSSIKSFFSMVNSAFNGK 972
            F+NFYSDPEYK KVPR NFFPQP VDAAVV F+LK   +YPQVSS KSFFSMVNSAFN K
Sbjct: 232  FVNFYSDPEYKLKVPRSNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEK 291

Query: 973  RKMLRKSLQHITSSPEIEEALVNVGLLATSRPEELTLEDFVKLHNLI 1113
            RKMLRKSLQHI +S EIEEAL ++GLLATSRPEELTL+DFVKLHNLI
Sbjct: 292  RKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLI 338


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