BLASTX nr result

ID: Atractylodes21_contig00010648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010648
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]    65   6e-09
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...    65   8e-09
ref|NP_566222.1| pentatricopeptide repeat-containing protein [Ar...    64   2e-08
dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]                       64   2e-08
gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thal...    64   2e-08

>emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]
          Length = 324

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = -2

Query: 124 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSM 2
           FYNALIHTL RAG+L+E ++VFEVEMP  GV  NTSTYNSM
Sbjct: 12  FYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSM 52


>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -2

Query: 124 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSM 2
           FYNALIHTL RAG+L+E + VFEVEMP  GV  NTSTYNSM
Sbjct: 322 FYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSM 362


>ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|79312733|ref|NP_001030630.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g04130, mitochondrial; Flags: Precursor
           gi|332640519|gb|AEE74040.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332640520|gb|AEE74041.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 31/41 (75%)
 Frame = -2

Query: 124 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSM 2
           FYN LIHTL RAGRL+E   VF VEMP  GV  NTSTYNSM
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 371


>dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
          Length = 508

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 31/41 (75%)
 Frame = -2

Query: 124 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSM 2
           FYN LIHTL RAGRL+E   VF VEMP  GV  NTSTYNSM
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 371


>gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
          Length = 572

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 31/41 (75%)
 Frame = -2

Query: 124 FYNALIHTLERAGRLQEVLNVFEVEMPSFGVGTNTSTYNSM 2
           FYN LIHTL RAGRL+E   VF VEMP  GV  NTSTYNSM
Sbjct: 395 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 435


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