BLASTX nr result

ID: Atractylodes21_contig00010646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010646
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   308   7e-82
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...   301   5e-80
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...   301   5e-80
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...   289   3e-76
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi...   284   8e-75

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  308 bits (788), Expect = 7e-82
 Identities = 148/210 (70%), Positives = 170/210 (80%)
 Frame = -3

Query: 630 YNIFIHGWCKINRVDEAHWTIQEMTGSGCRPXXXXXXXXXXXYCRHSNFSKVYELLDEMQ 451
           +NIFIHGWCK NRVDEA WTIQEM G GCRP           YCR SNF KVYELLD+MQ
Sbjct: 218 FNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQ 277

Query: 450 AQGCPANVVTFTTIMSYLTKSKEFEEALQIPEKMKSVGCKPDTLFYNALIHTLARAGRVQ 271
           AQGC  NVVT+TTIM  LTK ++FEEALQI E+M+SVGCKPDTLFYNALIHTL RAG+++
Sbjct: 278 AQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLR 337

Query: 270 EALNVFEVEMPSFGVVPNTSTYNSMIAMFCHHGRDQEAVNVLRNLENSQHCRPDIQSYNP 91
           EA+ VFEVEMP  GV PNTSTYNSMIAMFCHH ++Q+A+N+LR +ENS  C+PDIQ+Y P
Sbjct: 338 EAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYP 397

Query: 90  LLKLCFRTGKTDVWLGNLLDEMVNKRHLSL 1
           +LK CF+TGK D  L N LD+MVNK HLSL
Sbjct: 398 VLKSCFKTGKIDS-LSNFLDDMVNKHHLSL 426


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  301 bits (772), Expect = 5e-80
 Identities = 139/210 (66%), Positives = 170/210 (80%)
 Frame = -3

Query: 630 YNIFIHGWCKINRVDEAHWTIQEMTGSGCRPXXXXXXXXXXXYCRHSNFSKVYELLDEMQ 451
           +N+FIHGWCK+N++DEAHWT++EM G G RP           YC   NF+KVYELLDEM 
Sbjct: 213 FNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMD 272

Query: 450 AQGCPANVVTFTTIMSYLTKSKEFEEALQIPEKMKSVGCKPDTLFYNALIHTLARAGRVQ 271
           AQGCPANV+T+TTIM  LTKS+EFEEALQI E+MKS G +PDTLFYN LIHTL RAG+V+
Sbjct: 273 AQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVR 332

Query: 270 EALNVFEVEMPSFGVVPNTSTYNSMIAMFCHHGRDQEAVNVLRNLENSQHCRPDIQSYNP 91
           EA++VFEVEMPS  V+PNTSTYNSMIAM+C   R+++A+ +L  ++ S+HC+PD+Q+Y P
Sbjct: 333 EAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYP 392

Query: 90  LLKLCFRTGKTDVWLGNLLDEMVNKRHLSL 1
           LLK CFRTGKTD  L NLLDEM+NK HLSL
Sbjct: 393 LLKSCFRTGKTDYDLSNLLDEMINKHHLSL 422


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  301 bits (772), Expect = 5e-80
 Identities = 139/210 (66%), Positives = 170/210 (80%)
 Frame = -3

Query: 630 YNIFIHGWCKINRVDEAHWTIQEMTGSGCRPXXXXXXXXXXXYCRHSNFSKVYELLDEMQ 451
           +N+FIHGWCK+N++DEAHWT++EM G G RP           YC   NF+KVYELLDEM 
Sbjct: 244 FNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMD 303

Query: 450 AQGCPANVVTFTTIMSYLTKSKEFEEALQIPEKMKSVGCKPDTLFYNALIHTLARAGRVQ 271
           AQGCPANV+T+TTIM  LTKS+EFEEALQI E+MKS G +PDTLFYN LIHTL RAG+V+
Sbjct: 304 AQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVR 363

Query: 270 EALNVFEVEMPSFGVVPNTSTYNSMIAMFCHHGRDQEAVNVLRNLENSQHCRPDIQSYNP 91
           EA++VFEVEMPS  V+PNTSTYNSMIAM+C   R+++A+ +L  ++ S+HC+PD+Q+Y P
Sbjct: 364 EAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYP 423

Query: 90  LLKLCFRTGKTDVWLGNLLDEMVNKRHLSL 1
           LLK CFRTGKTD  L NLLDEM+NK HLSL
Sbjct: 424 LLKSCFRTGKTDYDLSNLLDEMINKHHLSL 453


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score =  289 bits (740), Expect = 3e-76
 Identities = 136/210 (64%), Positives = 166/210 (79%)
 Frame = -3

Query: 630 YNIFIHGWCKINRVDEAHWTIQEMTGSGCRPXXXXXXXXXXXYCRHSNFSKVYELLDEMQ 451
           +NIFIHGWCK+NRV+EA+WTIQEM G GC P           YC  SNFSKVYELLDEM+
Sbjct: 191 FNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEME 250

Query: 450 AQGCPANVVTFTTIMSYLTKSKEFEEALQIPEKMKSVGCKPDTLFYNALIHTLARAGRVQ 271
           AQG   NVVT+T++MS L KS+E+EEALQI ++MKSVGCKPDTLFYN+LIHTL +AGR +
Sbjct: 251 AQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPE 310

Query: 270 EALNVFEVEMPSFGVVPNTSTYNSMIAMFCHHGRDQEAVNVLRNLENSQHCRPDIQSYNP 91
           EA+ VFEVEMP+ GV PNTSTYNSMIAM CHH ++++A+N+L+ +E S  C+PD+Q+Y P
Sbjct: 311 EAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKPDVQTYYP 370

Query: 90  LLKLCFRTGKTDVWLGNLLDEMVNKRHLSL 1
           LLK CF+ G  D  L  LLD+MV K HLSL
Sbjct: 371 LLKSCFKAGSIDSLLSQLLDDMVKKHHLSL 400


>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Glycine max]
          Length = 490

 Score =  284 bits (727), Expect = 8e-75
 Identities = 130/210 (61%), Positives = 168/210 (80%)
 Frame = -3

Query: 630 YNIFIHGWCKINRVDEAHWTIQEMTGSGCRPXXXXXXXXXXXYCRHSNFSKVYELLDEMQ 451
           +NIFIHGWCKI RVDEAHWTIQEM G G  P           YC+  NFS+VYELLDEMQ
Sbjct: 215 FNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQ 274

Query: 450 AQGCPANVVTFTTIMSYLTKSKEFEEALQIPEKMKSVGCKPDTLFYNALIHTLARAGRVQ 271
           AQGC ANV+T+T+IM  L K+K+FEEAL++PE+M+S GC+PDTLF+N+LIHTL RAGR+ 
Sbjct: 275 AQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLD 334

Query: 270 EALNVFEVEMPSFGVVPNTSTYNSMIAMFCHHGRDQEAVNVLRNLENSQHCRPDIQSYNP 91
           +A +VF+VEMP  GV PNTSTYNSMI+MFC+H +++ A+ +L+ +ENS  C+PD Q+Y+P
Sbjct: 335 DAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHP 394

Query: 90  LLKLCFRTGKTDVWLGNLLDEMVNKRHLSL 1
           L+K CFR+GK D  L  +L++M+NK+HLSL
Sbjct: 395 LIKSCFRSGKIDGVLSEILNDMINKQHLSL 424


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