BLASTX nr result

ID: Atractylodes21_contig00010612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010612
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38093.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    93   2e-17
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...    89   4e-16
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...    89   5e-16
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    89   5e-16

>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = -1

Query: 359 GEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDKI 207
           GEIDKRVQFLIEGLFA+RKAKFQGHPAVRPELDLVE EDQLTHE+ L +KI
Sbjct: 125 GEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISLEEKI 175



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -2

Query: 199  LPWHVLAYIRLTEEDTTSSSRIFIKILFQGMSK 101
            LPWHVLAYIRLTEEDTTSSSRIFIKILFQ +S+
Sbjct: 2460 LPWHVLAYIRLTEEDTTSSSRIFIKILFQELSE 2492


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = -1

Query: 359 GEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDKI 207
           GEIDKRVQFLIEGLFA+RKAKFQGHPAVRPELDLVE EDQLTHE+ L +KI
Sbjct: 401 GEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISLEEKI 451



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -2

Query: 199 LPWHVLAYIRLTEEDTTSSSRIFIKILFQGMSK 101
           LPWHVLAYIRLTEEDTTSSSRIFIKILFQ +S+
Sbjct: 638 LPWHVLAYIRLTEEDTTSSSRIFIKILFQELSE 670


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -1

Query: 359 GEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDKI 207
           GEIDKRVQFLIEGLFA+RKAKFQG+PAVRPELDLVE EDQLTHE+ L + I
Sbjct: 398 GEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLQEDI 448



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -2

Query: 199 LPWHVLAYIRLTEEDTTSSSRIFIKILFQGMSK 101
           LPWHVLAYIRLTEEDTTSSSRIFIKILFQ +S+
Sbjct: 610 LPWHVLAYIRLTEEDTTSSSRIFIKILFQELSE 642


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/51 (82%), Positives = 48/51 (94%)
 Frame = -1

Query: 359 GEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDKI 207
           GEIDKRVQFLIEGLFA+RKAKF+G+PAVRPELDLVE EDQLTHE+ L ++I
Sbjct: 418 GEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEI 468



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 199 LPWHVLAYIRLTEEDTTSSSRIFIKILFQGMSK 101
           LPWHVL+YIRLTEEDTTSSSRIFIKILFQ +S+
Sbjct: 651 LPWHVLSYIRLTEEDTTSSSRIFIKILFQELSE 683


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/51 (82%), Positives = 48/51 (94%)
 Frame = -1

Query: 359 GEIDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQLTHEVPLLDKI 207
           GEIDKRVQFLIEGLFA+RKAKF+G+PAVRPELDLVE EDQLTHE+ L ++I
Sbjct: 418 GEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEI 468



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 199 LPWHVLAYIRLTEEDTTSSSRIFIKILFQGMSK 101
           LPWHVL+YIRLTEEDTTSSSRIFIKILFQ +S+
Sbjct: 651 LPWHVLSYIRLTEEDTTSSSRIFIKILFQELSE 683


Top