BLASTX nr result

ID: Atractylodes21_contig00010579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010579
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   112   4e-23
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]              107   2e-21
ref|XP_003532521.1| PREDICTED: uncharacterized protein LOC100785...   107   2e-21
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ...   106   3e-21

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/70 (77%), Positives = 61/70 (87%)
 Frame = -1

Query: 432 MVHAAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEF 253
           MV+A KG+FISCDIPMAQFIIN NAS+P SQKFIIH+LD THLFV  +V  MIRSAI EF
Sbjct: 1   MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60

Query: 252 REKNTYEKPA 223
           RE+N+YEKPA
Sbjct: 61  REQNSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 432 MVHAAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEF 253
           MV+A KG+FISCDIPMAQFIIN NASLP SQKFIIHILD TH+FV  +V  MIRSAI +F
Sbjct: 1   MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60

Query: 252 REKNTYEKPA 223
           RE+N+YEKP+
Sbjct: 61  REQNSYEKPS 70


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 61/72 (84%)
 Frame = -1

Query: 441 IYIMVHAAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAI 262
           + +MV+A KG+F+SCDIPM QFI+N N S+P SQKFIIH+LD THLFV  +V+ MIRSAI
Sbjct: 40  VLLMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAI 99

Query: 261 QEFREKNTYEKP 226
            +FR++N+YEKP
Sbjct: 100 SDFRDQNSYEKP 111


>ref|XP_003532521.1| PREDICTED: uncharacterized protein LOC100785713 [Glycine max]
          Length = 157

 Score =  107 bits (266), Expect = 2e-21
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = -1

Query: 441 IYIMVHAAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAI 262
           +Y MV+A KG+FISCDIPMAQ+IIN NASLP S KFIIHILD TH+FV  +V+ MIRS I
Sbjct: 85  LYNMVNATKGVFISCDIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSRI 144

Query: 261 QEFREKNTYEKP 226
            +FRE NTY KP
Sbjct: 145 AKFREDNTYVKP 156


>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
           sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
           general transcription factor IIH subunit 5-like [Cucumis
           sativus]
          Length = 70

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = -1

Query: 432 MVHAAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEF 253
           MV+A KG+FISCDIPMAQFIINYNASLP S +FIIHILD TH+FV  +V  MIR+AI EF
Sbjct: 1   MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF 60

Query: 252 REKNTYEKP 226
           RE+ +YEKP
Sbjct: 61  REQISYEKP 69


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