BLASTX nr result

ID: Atractylodes21_contig00010547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010547
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   193   2e-47
emb|CBI36847.3| unnamed protein product [Vitis vinifera]              191   5e-47
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   191   5e-47
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   191   5e-47
gb|ABR18062.1| unknown [Picea sitchensis]                             190   1e-46

>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score =  193 bits (490), Expect = 2e-47
 Identities = 96/129 (74%), Positives = 101/129 (78%)
 Frame = +1

Query: 1   AIRGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLP 180
           AIRGRDGYDFDGHRLRVELAHGGRG                         DYRVLVTGLP
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRS-DYRVLVTGLP 119

Query: 181 SSASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 360
           SSASWQDLKDHMRRAGDVCFSQVF++G GTTGIVDYTNYDDMKYAI+KLDDSEFRNAFSR
Sbjct: 120 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR 179

Query: 361 GVIRVKEYD 387
             +RV+EYD
Sbjct: 180 AYVRVREYD 188


>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  191 bits (486), Expect = 5e-47
 Identities = 96/129 (74%), Positives = 100/129 (77%)
 Frame = +1

Query: 1   AIRGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLP 180
           AIRGRDGYDFDGHRLRVELAHGGRG                         +YRVLVTGLP
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS-EYRVLVTGLP 119

Query: 181 SSASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 360
           SSASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIRKLDDSEFRNAFSR
Sbjct: 120 SSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSR 179

Query: 361 GVIRVKEYD 387
             +RVKEYD
Sbjct: 180 AYVRVKEYD 188


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score =  191 bits (486), Expect = 5e-47
 Identities = 96/129 (74%), Positives = 100/129 (77%)
 Frame = +1

Query: 1   AIRGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLP 180
           AIRGRDGYDFDGHRLRVELAHGGRG                         +YRVLVTGLP
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS-EYRVLVTGLP 119

Query: 181 SSASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 360
           SSASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIRKLDDSEFRNAFSR
Sbjct: 120 SSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSR 179

Query: 361 GVIRVKEYD 387
             +RVKEYD
Sbjct: 180 AYVRVKEYD 188


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  191 bits (486), Expect = 5e-47
 Identities = 96/129 (74%), Positives = 100/129 (77%)
 Frame = +1

Query: 1   AIRGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLP 180
           AIRGRDGYDFDGHRLRVELAHGGRG                         +YRVLVTGLP
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS-EYRVLVTGLP 119

Query: 181 SSASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 360
           SSASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIRKLDDSEFRNAFSR
Sbjct: 120 SSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSR 179

Query: 361 GVIRVKEYD 387
             +RVKEYD
Sbjct: 180 AYVRVKEYD 188


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  190 bits (482), Expect = 1e-46
 Identities = 94/128 (73%), Positives = 100/128 (78%)
 Frame = +1

Query: 1   AIRGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLP 180
           AIRGRDGY+FDG+RLRVELAHGGRG                         +YRVLV+GLP
Sbjct: 61  AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120

Query: 181 SSASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 360
           SSASWQDLKDHMRRAGDVCFSQVF++  GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 180

Query: 361 GVIRVKEY 384
           G IRVKEY
Sbjct: 181 GYIRVKEY 188


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