BLASTX nr result

ID: Atractylodes21_contig00010538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010538
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   100   2e-41
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-38
emb|CBI18269.3| unnamed protein product [Vitis vinifera]               96   4e-38
ref|XP_002533876.1| zinc finger protein, putative [Ricinus commu...   102   5e-38
ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...    99   3e-36

>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score = 99.8 bits (247), Expect(2) = 2e-41
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +3

Query: 429 VFCSFLCLMASGVISNVVLMGNNVTLSFDDIGANFAPPVKGSGECGTLFLAEPRDACAPL 608
           +FC+FL LMAS   +NVVL+GNNVTLSFDDI ANFA PVKGSGECG L++AEP DAC+PL
Sbjct: 9   LFCAFLNLMASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDACSPL 68

Query: 609 TN 614
           TN
Sbjct: 69  TN 70



 Score = 96.3 bits (238), Expect(2) = 2e-41
 Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = +2

Query: 710 FVLIVRGGCSFEDKVRRAQSAGFKAAIVHNNDDSD-LVAMAGDSAGIVIHAVFVSKSSGL 886
           FVLIVRGGC FEDKVR AQ AGF AAIV++N+D   LVAMAG+SAGI IHAVFVSK+SG+
Sbjct: 82  FVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVFVSKASGM 141

Query: 887 KLRKYAG 907
            L+ YAG
Sbjct: 142 VLQTYAG 148


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 99.8 bits (247), Expect(2) = 1e-38
 Identities = 48/68 (70%), Positives = 60/68 (88%)
 Frame = +2

Query: 710 FVLIVRGGCSFEDKVRRAQSAGFKAAIVHNNDDSDLVAMAGDSAGIVIHAVFVSKSSGLK 889
           FVLI+R GCSFEDKVRRAQ AG+KAAI+++N++  LVAMAG+SAG+ I AVFVSK+SG  
Sbjct: 79  FVLIIREGCSFEDKVRRAQKAGYKAAIIYDNEEGILVAMAGNSAGVTIPAVFVSKTSGET 138

Query: 890 LRKYAGMT 913
           L+KYAG+T
Sbjct: 139 LKKYAGLT 146



 Score = 87.0 bits (214), Expect(2) = 1e-38
 Identities = 42/62 (67%), Positives = 51/62 (82%)
 Frame = +3

Query: 447 CLMASGVISNVVLMGNNVTLSFDDIGANFAPPVKGSGECGTLFLAEPRDACAPLTNNSIK 626
           CL+ASG   NV+L+GNNVT++FDDI ANFAP +KGSGECG L+LAEP DAC+ LTN + K
Sbjct: 15  CLVASG---NVLLIGNNVTMAFDDIEANFAPAIKGSGECGVLYLAEPIDACSDLTNQAEK 71

Query: 627 DS 632
            S
Sbjct: 72  GS 73


>emb|CBI18269.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score = 96.3 bits (238), Expect(2) = 4e-38
 Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = +2

Query: 710 FVLIVRGGCSFEDKVRRAQSAGFKAAIVHNNDDSD-LVAMAGDSAGIVIHAVFVSKSSGL 886
           FVLIVRGGC FEDKVR AQ AGF AAIV++N+D   LVAMAG+SAGI IHAVFVSK+SG+
Sbjct: 66  FVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVFVSKASGM 125

Query: 887 KLRKYAG 907
            L+ YAG
Sbjct: 126 VLQTYAG 132



 Score = 89.0 bits (219), Expect(2) = 4e-38
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = +3

Query: 453 MASGVISNVVLMGNNVTLSFDDIGANFAPPVKGSGECGTLFLAEPRDACAPLTN 614
           MAS   +NVVL+GNNVTLSFDDI ANFA PVKGSGECG L++AEP DAC+PLTN
Sbjct: 1   MASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDACSPLTN 54


>ref|XP_002533876.1| zinc finger protein, putative [Ricinus communis]
           gi|223526177|gb|EEF28507.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 434

 Score =  102 bits (253), Expect(2) = 5e-38
 Identities = 51/69 (73%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = +2

Query: 710 FVLIVRGGCSFEDKVRRAQSAGFKAAIVHNN-DDSDLVAMAGDSAGIVIHAVFVSKSSGL 886
           FVL++RGGCSFEDKVRRAQ AGFKAAIV++N DD  LV+MAG+SAGI IHAVF+SKSSG 
Sbjct: 84  FVLVIRGGCSFEDKVRRAQRAGFKAAIVYDNEDDGVLVSMAGNSAGIKIHAVFISKSSGE 143

Query: 887 KLRKYAGMT 913
            L+KY G++
Sbjct: 144 TLKKYVGLS 152



 Score = 82.8 bits (203), Expect(2) = 5e-38
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = +3

Query: 441 FLCLMASGVISNVVLMGNNVTLSFDDIGANFAPPVKGSGECGTLFLAEPRDACAPLTNNS 620
           +L    S  ++NVVL+G NVTLSFDD+ A FAP VK SGECG L+LAEP DAC+ LTN  
Sbjct: 14  YLSACCSMTLANVVLIGRNVTLSFDDVEATFAPAVKSSGECGQLYLAEPVDACSELTNKV 73

Query: 621 IKDSKN 638
           +K + N
Sbjct: 74  VKPTSN 79


>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 469

 Score = 99.0 bits (245), Expect(2) = 3e-36
 Identities = 51/69 (73%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
 Frame = +2

Query: 710 FVLIVRGGCSFEDKVRRAQSAGFKAAIVHNNDDSD-LVAMAGDSAGIVIHAVFVSKSSGL 886
           F L+VRGGCSFE+KVRRAQ AGFKA IV++N+D   LVAMAG+SAGI IHAVFVSK+SG 
Sbjct: 80  FALVVRGGCSFEEKVRRAQKAGFKAVIVYDNEDGGILVAMAGNSAGIKIHAVFVSKASGE 139

Query: 887 KLRKYAGMT 913
            L KYAG+T
Sbjct: 140 ILSKYAGLT 148



 Score = 80.1 bits (196), Expect(2) = 3e-36
 Identities = 41/57 (71%), Positives = 45/57 (78%)
 Frame = +3

Query: 444 LCLMASGVISNVVLMGNNVTLSFDDIGANFAPPVKGSGECGTLFLAEPRDACAPLTN 614
           LC MA+   S VVL+GNN+TLSFDDI ANFAP VKGSGE G L+LAEP DAC  LTN
Sbjct: 15  LCAMAA---SKVVLIGNNITLSFDDIEANFAPTVKGSGEYGILYLAEPLDACTELTN 68


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