BLASTX nr result

ID: Atractylodes21_contig00010529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010529
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21155.3| unnamed protein product [Vitis vinifera]              124   8e-27
emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]   124   8e-27
ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-co...   122   2e-26
ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   121   5e-26
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  124 bits (311), Expect = 8e-27
 Identities = 69/127 (54%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
 Frame = +1

Query: 1   RYVPSFIPPPMATXXXXXXXXXXXXXXXXXXX--SRNIDHFMEELKHXXXXXXXXXXXXX 174
           RYVPSFIPPP+A                      SRNIDHFMEELKH             
Sbjct: 86  RYVPSFIPPPLAAKGKEPDKKKEEEKPKEREKGKSRNIDHFMEELKHEQEMRERRNQERD 145

Query: 175 XXXDGRHSDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLR 351
              DGRH+D+S                GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLR
Sbjct: 146 QWRDGRHNDSSALPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLR 205

Query: 352 TFGRFGP 372
           TFGRFGP
Sbjct: 206 TFGRFGP 212


>emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]
          Length = 1384

 Score =  124 bits (311), Expect = 8e-27
 Identities = 70/127 (55%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
 Frame = +1

Query: 1   RYVPSFIPPPMATXXXXXXXXXXXXXXXXXXX--SRNIDHFMEELKHXXXXXXXXXXXXX 174
           RYVPSFIPPP+A                      SRNIDHFMEELKH             
Sbjct: 204 RYVPSFIPPPLAAKGXEPDKKKEEEKPKEREKGKSRNIDHFMEELKHEQEMRERRNQERD 263

Query: 175 XXXDGRHSDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLR 351
              DGRH+D+S                GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLR
Sbjct: 264 QWRDGRHNDSSAPPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLR 323

Query: 352 TFGRFGP 372
           TFGRFGP
Sbjct: 324 TFGRFGP 330


>ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Cucumis sativus] gi|449493301|ref|XP_004159248.1|
           PREDICTED: U2 snRNP-associated SURP motif-containing
           protein-like [Cucumis sativus]
          Length = 961

 Score =  122 bits (307), Expect = 2e-26
 Identities = 68/126 (53%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   RYVPSFIPPPMATXXXXXXXXXXXXXXXXXXX-SRNIDHFMEELKHXXXXXXXXXXXXXX 177
           RYVPSFIPPP+A+                    SRNIDHFMEELKH              
Sbjct: 86  RYVPSFIPPPLASKGKESDKKELEKPKEKEKGKSRNIDHFMEELKHEQELRERRNQDREH 145

Query: 178 XXDGRHSDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 354
             +GRH + ST               GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT
Sbjct: 146 WREGRHGEISTPSSRFDELPDDFDPSGKFPGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 205

Query: 355 FGRFGP 372
           FGRFGP
Sbjct: 206 FGRFGP 211


>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score =  121 bits (304), Expect = 5e-26
 Identities = 67/126 (53%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   RYVPSFIPPPMATXXXXXXXXXXXXXXXXXXX--SRNIDHFMEELKHXXXXXXXXXXXXX 174
           RYVPSFIPPPMAT                     SRNIDHFMEELKH             
Sbjct: 86  RYVPSFIPPPMATKGKESERKKEEEKPKEKEKGKSRNIDHFMEELKHEQEMRERRNQERE 145

Query: 175 XXXDGRHSDTSTXXXXXXXXXXXXXXXGKPGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 354
              DGRH++ S                  PGSFDDGDPQTTNLYVGNLSP+VDENFLLRT
Sbjct: 146 HWRDGRHTEHSISSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRT 205

Query: 355 FGRFGP 372
           FGRFGP
Sbjct: 206 FGRFGP 211


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  120 bits (302), Expect = 9e-26
 Identities = 67/127 (52%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
 Frame = +1

Query: 1   RYVPSFIPPPMATXXXXXXXXXXXXXXXXXXX--SRNIDHFMEELKHXXXXXXXXXXXXX 174
           RYVPSFIPPPMA                      +RNIDHFMEELKH             
Sbjct: 86  RYVPSFIPPPMAPKGKEPERKREEERPKEKEKGKTRNIDHFMEELKHEHEMRERRNQERE 145

Query: 175 XXXDGRHSDTSTXXXXXXXXXXXXXXXGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLR 351
              +GRH+++S                GK PGSFDDGDPQTTNLYVGNLSPQVDENFLLR
Sbjct: 146 HWREGRHTESSAPSSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLR 205

Query: 352 TFGRFGP 372
           TFGRFGP
Sbjct: 206 TFGRFGP 212


Top