BLASTX nr result

ID: Atractylodes21_contig00010526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010526
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   283   6e-74
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   278   1e-72
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   273   4e-71
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              273   4e-71
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   273   7e-71

>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
            gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
            helicase, putative [Ricinus communis]
          Length = 1588

 Score =  283 bits (724), Expect = 6e-74
 Identities = 150/281 (53%), Positives = 201/281 (71%), Gaps = 3/281 (1%)
 Frame = +1

Query: 289  MGRRKQIRPRRAGGVVDSGGVSKEELGDPDASQALENELS-GHNNPFYVEVDRNNWVSEE 465
            MGRRKQ RP R+GG+V +   S+ EL    A +    E +   + P+YVEVD++NWVS +
Sbjct: 1    MGRRKQARPNRSGGLVIANSASEAELDKQKAPKTDSAEKAIPVSRPYYVEVDKSNWVSND 60

Query: 466  HYDISEVLLTNLNASGEFQAKKSEEQHCFNDEKYGLRFRLSNVNEF-LGRIKLGHWPVLS 642
            H+DISEV+L +LN  GE  +    + +   + KY LR R+ NV+ F L RIKLG+WPVLS
Sbjct: 61   HFDISEVILNDLNL-GEAYSSCRIKSNFSQESKYSLRVRVCNVDGFVLDRIKLGYWPVLS 119

Query: 643  ASDIYLEFIEKQESMDIETH-VMVTGNFDGPNEGVSGLVHLVNMKLLTLRPILGATFSGS 819
            +SDI LE IE+    D E   V+ +G+FDGP+EG++ LVHL++M+ LTLRP+LG  +S  
Sbjct: 120  SSDISLECIEESMVEDKEMQSVIFSGSFDGPDEGITSLVHLISMEFLTLRPVLGFNYSEE 179

Query: 820  LSSIRLRVEIQKCAFEACESLVENTRQLWKKSMMNVMTWLRPEVMTSEARYGYKVPEDIE 999
            + S+R+RVEI K AF++C+SL+ENTRQLWKKSMMNVM WLRPEV+TSEARYG     +++
Sbjct: 180  MMSLRVRVEILKKAFDSCKSLLENTRQLWKKSMMNVMAWLRPEVVTSEARYGVTKSTEVD 239

Query: 1000 IGLEPNEESVVSRKRARLDVSGFYEAIKPSKDNPMLIDDMP 1122
            +  E   +   SRKR R DV+GFYEAIKPSK +P+L DD+P
Sbjct: 240  LVGEMGNDISYSRKRPRFDVAGFYEAIKPSKSSPILNDDLP 280


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222870983|gb|EEF08114.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1320

 Score =  278 bits (712), Expect = 1e-72
 Identities = 150/291 (51%), Positives = 206/291 (70%), Gaps = 13/291 (4%)
 Frame = +1

Query: 289  MGRRKQIRPRRAGGVV---DSGGVSKEELGDP---DASQALENELSG-HNNPFYVEVDRN 447
            MGRRKQ RP R+GG++   ++   +  EL +     +S A   EL G    P++VEV+RN
Sbjct: 1    MGRRKQARPHRSGGLIIQNNAAASASAELKNQRKASSSDAQPTELVGIDEQPYFVEVERN 60

Query: 448  NWVSEEHYDISEVLLTNLNASGEFQAKKSEEQHCFNDEKYGLRFRLSNVNE-FLGRIKLG 624
            +W S  H D SE++L  LN   E+ + +  +   ++D KY LRFR+SNV +  L RIKLG
Sbjct: 61   SWASNHHRDASELVLHGLNLRQEYSSFRVTDGF-YHDSKYSLRFRVSNVKQSVLSRIKLG 119

Query: 625  HWPVLSASDIYLEFIEK---QESMDIETHVMVTGNFDGPNEGVSGLVHLVNMKLLTLRPI 795
            HWPV S+SDI LE IEK   +E  ++E+ V+ +G+FDGP+EG++GLVHL NM+ LTLRP+
Sbjct: 120  HWPVFSSSDISLELIEKSMVEEDREVES-VIFSGSFDGPDEGITGLVHLTNMEFLTLRPV 178

Query: 796  LGATFSGSLSSIRLRVEIQKCAFEACESLVENTRQLWKKSMMNVMTWLRPEVMTSEARYG 975
            LG  FS  ++ +R+RVEI + AF+ACESL+E+TRQ+WKKSMMNVM WLRPEVMTSEARY 
Sbjct: 179  LGVDFSEKMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMNVMAWLRPEVMTSEARYR 238

Query: 976  YKVPEDIEIGL--EPNEESVVSRKRARLDVSGFYEAIKPSKDNPMLIDDMP 1122
            +    ++E+ +  E  +++  S KRA+ DV+G YEAIKPSK +PML DD+P
Sbjct: 239  HAKSTEMEVNMAAEIGDDTSNSGKRAQFDVAGLYEAIKPSKSDPMLEDDLP 289


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  273 bits (699), Expect = 4e-71
 Identities = 150/284 (52%), Positives = 197/284 (69%), Gaps = 6/284 (2%)
 Frame = +1

Query: 289  MGRRKQIRPRRAGGVVDSGGVSKEELGDPDASQ--ALENELSGHNNPFYVEVDRNNWVSE 462
            MGRRKQ +P R+ GVV+     +   G+ ++ Q  A  +E+     P +VEVDR  W S 
Sbjct: 1    MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGDEVGDAETPLFVEVDRTGWGSG 60

Query: 463  EHYDISEVLLTNLNASGEFQAKKSEEQHCFNDEKYGLRFRLSNVNEFLGRIKLGHWPVLS 642
            EH DISE++L +LN   EF      E   + + K  LRFRL N N+F+GRI+LGHWPV++
Sbjct: 61   EHLDISEIVLNDLNLREEFHGYSLGEGF-YENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 643  ASDIYLEFIEKQESMD-IETH-VMVTGNFDGPNEGVSGLVHLVNMKLLTLRPILGATFSG 816
            AS I LEF+EK+ S + IET  V+++G FDGP+EGVSGLVHL  +KLLTLRP+LG TFS 
Sbjct: 120  ASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSE 179

Query: 817  SLSSIRLRVEIQKCAFEACESLVENTRQLWKKSMMNVMTWLRPEVMTSEARYGYKVPE-- 990
             +S +RLRVEI + AF+ACESL++N+R LWKKSMM+VM WLRPEV TSEARYG    +  
Sbjct: 180  GVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKEM 239

Query: 991  DIEIGLEPNEESVVSRKRARLDVSGFYEAIKPSKDNPMLIDDMP 1122
            DI+  +  +   + S+K    D +GFYEAIKPSK++P+L  DMP
Sbjct: 240  DIDSNMGMDVGDLDSKKHQNFDAAGFYEAIKPSKEDPLLDYDMP 283


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  273 bits (699), Expect = 4e-71
 Identities = 150/284 (52%), Positives = 197/284 (69%), Gaps = 6/284 (2%)
 Frame = +1

Query: 289  MGRRKQIRPRRAGGVVDSGGVSKEELGDPDASQ--ALENELSGHNNPFYVEVDRNNWVSE 462
            MGRRKQ +P R+ GVV+     +   G+ ++ Q  A  +E+     P +VEVDR  W S 
Sbjct: 1    MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGDEVGDAETPLFVEVDRTGWGSG 60

Query: 463  EHYDISEVLLTNLNASGEFQAKKSEEQHCFNDEKYGLRFRLSNVNEFLGRIKLGHWPVLS 642
            EH DISE++L +LN   EF      E   + + K  LRFRL N N+F+GRI+LGHWPV++
Sbjct: 61   EHLDISEIVLNDLNLREEFHGYSLGEGF-YENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 643  ASDIYLEFIEKQESMD-IETH-VMVTGNFDGPNEGVSGLVHLVNMKLLTLRPILGATFSG 816
            AS I LEF+EK+ S + IET  V+++G FDGP+EGVSGLVHL  +KLLTLRP+LG TFS 
Sbjct: 120  ASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSE 179

Query: 817  SLSSIRLRVEIQKCAFEACESLVENTRQLWKKSMMNVMTWLRPEVMTSEARYGYKVPE-- 990
             +S +RLRVEI + AF+ACESL++N+R LWKKSMM+VM WLRPEV TSEARYG    +  
Sbjct: 180  GVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKEM 239

Query: 991  DIEIGLEPNEESVVSRKRARLDVSGFYEAIKPSKDNPMLIDDMP 1122
            DI+  +  +   + S+K    D +GFYEAIKPSK++P+L  DMP
Sbjct: 240  DIDSNMGMDVGDLDSKKHQNFDAAGFYEAIKPSKEDPLLDYDMP 283


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  273 bits (697), Expect = 7e-71
 Identities = 139/285 (48%), Positives = 205/285 (71%), Gaps = 7/285 (2%)
 Frame = +1

Query: 289  MGRRKQIRPRRAGGVV-DSGGVSKEELGDP---DASQALENELSGHNNPFYVEVDRNNWV 456
            MGR+K  +P+RAGG++ ++   ++ EL      +  +  + + SG + P++VEVDR  W+
Sbjct: 1    MGRQKS-KPQRAGGIILETNAAAETELDKQNVIEGGKETKGDSSGIDKPYFVEVDRCGWL 59

Query: 457  SEEHYDISEVLLTNLNASGEFQAKKSEEQHCFNDEKYGLRFRLSNVNEFLGRIKLGHWPV 636
            S EH DISEV+L++LN    F   +  E   + D++Y LRF++ NV+  LGRIKLGHWPV
Sbjct: 60   SSEHLDISEVVLSDLNLREGFSGFELSEDF-YRDQQYLLRFQVCNVSNVLGRIKLGHWPV 118

Query: 637  LSASDIYLEFIEKQESMDIETH-VMVTGNFDGPNEGVSGLVHLVNMKLLTLRPILGATFS 813
            +  +DI+LEF+ +     +ET+ V+++G FDGP+EGV+GL+HL ++K +TLRP+LGA  S
Sbjct: 119  IPYTDIHLEFVRRVTIDHVETYTVLLSGIFDGPDEGVTGLLHLASLKFVTLRPVLGARLS 178

Query: 814  GSLSSIRLRVEIQKCAFEACESLVENTRQLWKKSMMNVMTWLRPEVMTSEARYGYKVPED 993
              +SS+R+RVE+ K AF+ACESL++++RQLWKKSM+NVM+WLRPE+MTSE RYG+     
Sbjct: 179  EEISSLRIRVEVLKSAFDACESLLDSSRQLWKKSMVNVMSWLRPEIMTSEVRYGFGTCMK 238

Query: 994  IEIG--LEPNEESVVSRKRARLDVSGFYEAIKPSKDNPMLIDDMP 1122
            +E+   +E  +++  +RK AR D +GF EAIKPSK  PML DD+P
Sbjct: 239  MEVDPQIEMADDTCKARKHARFDPAGFCEAIKPSKSEPMLKDDIP 283


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