BLASTX nr result

ID: Atractylodes21_contig00010502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010502
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...   393   e-107
ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop...   391   e-106
sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch...   390   e-106
ref|XP_002519282.1| tex protein-relatedtranscription accessory p...   386   e-105
gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]        383   e-104

>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
           gi|296083203|emb|CBI22839.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score =  393 bits (1009), Expect = e-107
 Identities = 202/256 (78%), Positives = 215/256 (83%)
 Frame = +3

Query: 3   YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 182
           YERCRTAP EGV+F+ DDF++A++KYD+NSEIGTKVKGTVF  D NGALVD+TAKSSA+L
Sbjct: 63  YERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSSAYL 122

Query: 183 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERCRQLQAE 362
           P+ EACIH IKHVEEAGIVPGVREEFVIIGENE DDSLILSLR IQYDLAWERCRQLQAE
Sbjct: 123 PVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLAWERCRQLQAE 182

Query: 363 DVVLTXXXXXXXXXXXXXIVEGLRGFIPFSQIXXXXXXXXXXXXXXXXXFVEVDEEQSRL 542
           DVV+              +VEGLRGF+PFSQI                 FVEVDEEQSRL
Sbjct: 183 DVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKFVEVDEEQSRL 242

Query: 543 VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV 722
           VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV
Sbjct: 243 VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV 302

Query: 723 LQPGDTLKVMILSHDR 770
           LQPGD LKVMILSHDR
Sbjct: 303 LQPGDILKVMILSHDR 318


>ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis
           sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S
           ribosomal protein S1, chloroplastic-like [Cucumis
           sativus]
          Length = 413

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/256 (76%), Positives = 216/256 (84%)
 Frame = +3

Query: 3   YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 182
           YERCR AP EG++FT++DFHAA+EKYD++SE+GTKVKGTVF  D NGALVD+TAKSSA+L
Sbjct: 67  YERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYL 126

Query: 183 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERCRQLQAE 362
           P++EACIH IKHVEEAG+ PG+REEFVIIGENE DDSLILSLR IQYDLAWERCRQLQAE
Sbjct: 127 PLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAE 186

Query: 363 DVVLTXXXXXXXXXXXXXIVEGLRGFIPFSQIXXXXXXXXXXXXXXXXXFVEVDEEQSRL 542
           DVV+              +VEGLRGF+PFSQI                 FVEVDEEQSRL
Sbjct: 187 DVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRL 246

Query: 543 VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV 722
           VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR+SDIATV
Sbjct: 247 VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATV 306

Query: 723 LQPGDTLKVMILSHDR 770
           LQPGD+LKVMILSHDR
Sbjct: 307 LQPGDSLKVMILSHDR 322


>sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName:
           Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1|
           ribosomal protein S1 [Spinacia oleracea]
           gi|170143|gb|AAA34045.1| chloroplast ribosomal protein
           S1 [Spinacia oleracea]
          Length = 411

 Score =  390 bits (1002), Expect = e-106
 Identities = 198/256 (77%), Positives = 217/256 (84%)
 Frame = +3

Query: 3   YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 182
           YERCR AP EGV+FT+DDFH A++KYD+NSE+G++VKGTVF  DANGALVD+TAKSSA+L
Sbjct: 64  YERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYL 123

Query: 183 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERCRQLQAE 362
           P+ EACI+ IK+VEEAGI+PGVREEFVIIGENE DDSLILSLRQIQY+LAWERCRQLQAE
Sbjct: 124 PLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAE 183

Query: 363 DVVLTXXXXXXXXXXXXXIVEGLRGFIPFSQIXXXXXXXXXXXXXXXXXFVEVDEEQSRL 542
           DVV+              +VEGLRGF+PFSQI                 FVEVDEEQSRL
Sbjct: 184 DVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQSRL 243

Query: 543 VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV 722
           V+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV
Sbjct: 244 VMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV 303

Query: 723 LQPGDTLKVMILSHDR 770
           LQPGDTLKVMILSHDR
Sbjct: 304 LQPGDTLKVMILSHDR 319


>ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative
           [Ricinus communis] gi|223541597|gb|EEF43146.1| tex
           protein-relatedtranscription accessory protein, putative
           [Ricinus communis]
          Length = 412

 Score =  386 bits (991), Expect = e-105
 Identities = 199/257 (77%), Positives = 215/257 (83%), Gaps = 1/257 (0%)
 Frame = +3

Query: 3   YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 182
           YERCRTAP EGVAFT +DFH+A+EKYD+NSEIGT VKGTVF  DANGA+VD+TAKSSA+L
Sbjct: 65  YERCRTAPMEGVAFTAEDFHSALEKYDFNSEIGTTVKGTVFMTDANGAVVDITAKSSAYL 124

Query: 183 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERCRQLQAE 362
           P++EACIH IKHVEEAGIVPG+ +EFVIIGENE DDSLILSLR IQYDL+WERCRQLQAE
Sbjct: 125 PVQEACIHKIKHVEEAGIVPGLTQEFVIIGENEADDSLILSLRAIQYDLSWERCRQLQAE 184

Query: 363 DVVLTXXXXXXXXXXXXXIVE-GLRGFIPFSQIXXXXXXXXXXXXXXXXXFVEVDEEQSR 539
           DV++              IVE GLRGF+PFSQI                 FV+VDEEQSR
Sbjct: 185 DVIVKGKVVGANKGGVVAIVEGGLRGFVPFSQISSKSTAEELLEKELPLKFVDVDEEQSR 244

Query: 540 LVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIAT 719
           LVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIAT
Sbjct: 245 LVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIAT 304

Query: 720 VLQPGDTLKVMILSHDR 770
           VLQPGDTLKVMILSHDR
Sbjct: 305 VLQPGDTLKVMILSHDR 321


>gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]
          Length = 415

 Score =  383 bits (984), Expect = e-104
 Identities = 196/256 (76%), Positives = 212/256 (82%)
 Frame = +3

Query: 3   YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 182
           Y+RCRTAP EGVAFTV+DFH+A+EKYD++SEIGTKVKGTVF  D NGALVD+TAKSSA+L
Sbjct: 69  YDRCRTAPMEGVAFTVEDFHSALEKYDFDSEIGTKVKGTVFMTDMNGALVDITAKSSAYL 128

Query: 183 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERCRQLQAE 362
           P++EACIH IKHV EAGI PG+ EEFVIIGE   DDSLILSLR IQYDLAWERCRQLQAE
Sbjct: 129 PVQEACIHKIKHVSEAGIYPGLVEEFVIIGEMNADDSLILSLRSIQYDLAWERCRQLQAE 188

Query: 363 DVVLTXXXXXXXXXXXXXIVEGLRGFIPFSQIXXXXXXXXXXXXXXXXXFVEVDEEQSRL 542
           DV++              IVEGLRGF+PFSQI                 FVEVDEEQSRL
Sbjct: 189 DVIVKGKVVGGNKGGVVAIVEGLRGFVPFSQISAKSTAEELIDKELPLKFVEVDEEQSRL 248

Query: 543 VLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATV 722
           VLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAF+DIGGINGLLHVSQISHDRVSDI+TV
Sbjct: 249 VLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFVDIGGINGLLHVSQISHDRVSDISTV 308

Query: 723 LQPGDTLKVMILSHDR 770
           LQPGDTLKVMILSHDR
Sbjct: 309 LQPGDTLKVMILSHDR 324


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