BLASTX nr result

ID: Atractylodes21_contig00010491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010491
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   118   6e-25
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...   117   1e-24
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...   116   2e-24
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                116   2e-24
ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...   115   3e-24

>ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 421

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/81 (67%), Positives = 66/81 (81%)
 Frame = -1

Query: 244 DYVSDLPQSIIETILTKLPLRDAVRTSILSSKWRYKWATLTQLDFDDKCVSGTYDRALAE 65
           D +SDLPQSIIE+IL +LP+RDAVRTSILSSKWRYKWA++TQL FDDKCV  + DR   E
Sbjct: 8   DLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPFSNDREAVE 67

Query: 64  IKLEKFVNQFLFLHDGPIHRF 2
             + KF+ + LFLH GPIH+F
Sbjct: 68  KSVVKFITRVLFLHQGPIHKF 88


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/81 (64%), Positives = 69/81 (85%)
 Frame = -1

Query: 244 DYVSDLPQSIIETILTKLPLRDAVRTSILSSKWRYKWATLTQLDFDDKCVSGTYDRALAE 65
           D+++DLP SIIE+ILT+LP+RDAV+TSILS+KWRY+WATLT L FDDKCV+   D+ + E
Sbjct: 8   DFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMYCDKGVLE 67

Query: 64  IKLEKFVNQFLFLHDGPIHRF 2
            +L KF+++ LFLH GPIH+F
Sbjct: 68  SRLVKFISRALFLHHGPIHKF 88


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/81 (64%), Positives = 65/81 (80%)
 Frame = -1

Query: 244 DYVSDLPQSIIETILTKLPLRDAVRTSILSSKWRYKWATLTQLDFDDKCVSGTYDRALAE 65
           D++SDLPQSIIE ILT+L +RDA+RTS+LSSKWRYKW+TLT L FD+KCVS + DR + E
Sbjct: 6   DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVVE 65

Query: 64  IKLEKFVNQFLFLHDGPIHRF 2
             L +F+   L LH GPIH+F
Sbjct: 66  TNLVRFITGVLLLHQGPIHKF 86


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/81 (64%), Positives = 65/81 (80%)
 Frame = -1

Query: 244 DYVSDLPQSIIETILTKLPLRDAVRTSILSSKWRYKWATLTQLDFDDKCVSGTYDRALAE 65
           D++SDLPQSIIE ILT+L +RDA+RTS+LSSKWRYKW+TLT L FD+KCVS + DR + E
Sbjct: 6   DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVVE 65

Query: 64  IKLEKFVNQFLFLHDGPIHRF 2
             L +F+   L LH GPIH+F
Sbjct: 66  TNLVRFITGVLLLHQGPIHKF 86


>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/81 (64%), Positives = 64/81 (79%)
 Frame = -1

Query: 244 DYVSDLPQSIIETILTKLPLRDAVRTSILSSKWRYKWATLTQLDFDDKCVSGTYDRALAE 65
           D++SDLPQSIIE ILT+L +RDA+RTS+LSSKWRYKW+TLT L FD+KCVS   DR + E
Sbjct: 6   DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPANDRCVVE 65

Query: 64  IKLEKFVNQFLFLHDGPIHRF 2
             L +F+   L LH GPIH+F
Sbjct: 66  TSLVRFITGVLLLHQGPIHKF 86


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