BLASTX nr result

ID: Atractylodes21_contig00010478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010478
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327905.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]        68   7e-10
ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|14...    65   4e-09
gb|AAB35284.1| arabinogalactan-protein [Nicotiana alata]               61   8e-08
dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana]                 60   2e-07

>ref|XP_002327905.1| predicted protein [Populus trichocarpa] gi|222837314|gb|EEE75693.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
 Frame = +1

Query: 37  NGGNMYNYNSQKQEQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDNAYNSQKQGMDE 216
           N GN  N N+     +      N Y T++QGMSDTRF+E G+YY+   +  N+++QGM +
Sbjct: 228 NNGNTNN-NNYNNNGYTTNYNNNGYETERQGMSDTRFMEGGKYYY---HVKNTERQGMSD 283

Query: 217 ASLMETEDGGNMY----NSQKQDMGDARFMENGRYN---QGEDMYNSQKQGMGEARYSTT 375
              ME   GG  Y    N+++Q M D RFME G+Y    + E+ Y + +   G+    +T
Sbjct: 284 TRSME---GGKYYSNVKNTERQGMSDTRFMEGGKYYSNVKNENYYPANEYVSGKV---ST 337

Query: 376 ANNGDMYNSQKQGMGEAMYSTTANNG 453
            N G   N +       M    +  G
Sbjct: 338 QNQGSYGNDENPNEFNTMEEYESQEG 363



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
 Frame = +1

Query: 43  GNMYNYNSQKQEQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDNAYNSQKQGMDEAS 222
           G  Y   +Q  E     N  N  NT     ++  +  NG   +  +N Y +++QGM +  
Sbjct: 208 GESYETENQNSENGYTKNYNNNGNT-----NNNNYNNNGYTTNYNNNGYETERQGMSDTR 262

Query: 223 LMETEDGGNMY----NSQKQDMGDARFMENGRYNQGEDMYNSQKQGMGEAR------YST 372
            ME   GG  Y    N+++Q M D R ME G+Y    ++ N+++QGM + R      Y +
Sbjct: 263 FME---GGKYYYHVKNTERQGMSDTRSMEGGKYY--SNVKNTERQGMSDTRFMEGGKYYS 317

Query: 373 TANNGDMYNSQKQGMGEAMYSTTANNG 453
              N + Y + +   G+    +T N G
Sbjct: 318 NVKNENYYPANEYVSGKV---STQNQG 341


>ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]
          Length = 282

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 32/151 (21%)
 Frame = +1

Query: 55  NYNSQKQEQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDN-AYNSQKQGMDEA---- 219
           N N++   ++   NG   + T++QGMSDTRFLENG+Y +  D  + NS K G   +    
Sbjct: 118 NNNNRYSTEYYKNNG---HTTEQQGMSDTRFLENGKYSYKPDTYSPNSNKNGYSSSYRNN 174

Query: 220 --SLMETEDGG------------------NMYNSQKQDMGDARFMENGRY-------NQG 318
             S   + + G                  N Y+++KQ M D RF+ENG+Y       N  
Sbjct: 175 GYSTSSSHNNGYSTSSSHNNGYSTSSSYNNGYSTEKQGMSDTRFLENGKYYHDLNNENHY 234

Query: 319 EDMYNSQKQGMGEARYSTTANNGDMYNSQKQ 411
            D YN++K       Y +   N + +NS ++
Sbjct: 235 VDGYNTEKGSTSNEFYYSNTENSNEFNSMEE 265



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
 Frame = +1

Query: 1   YNSQKQEQFVGTNGGNMYNYNSQKQEQ---FVGTNGGNMYNTQKQGMSDTRFLENGRYYH 171
           Y+S  +     T+  +   Y++           ++  N Y+T+KQGMSDTRFLENG+YYH
Sbjct: 167 YSSSYRNNGYSTSSSHNNGYSTSSSHNNGYSTSSSYNNGYSTEKQGMSDTRFLENGKYYH 226

Query: 172 AGDN------AYNSQKQGMDEASLMETEDGGNMYNSQKQDMGDARFMENGRYNQGEDMY 330
             +N       YN++K            +  N +NS ++        +   Y QG++ Y
Sbjct: 227 DLNNENHYVDGYNTEKGSTSNEFYYSNTENSNEFNSMEEYQ-----RQQEEYQQGQEEY 280


>ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|147778580|emb|CAN60306.1|
           hypothetical protein VITISV_005068 [Vitis vinifera]
          Length = 253

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/103 (35%), Positives = 54/103 (52%)
 Frame = +1

Query: 37  NGGNMYNYNSQKQEQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDNAYNSQKQGMDE 216
           NG N+Y+ +S         N  N YNT++QGMSDTRFLENGRYY+      NS+K   +E
Sbjct: 145 NGDNVYSSSSSNNNNNNNNNNNNGYNTKQQGMSDTRFLENGRYYY----DLNSEKNYRNE 200

Query: 217 ASLMETEDGGNMYNSQKQDMGDARFMENGRYNQGEDMYNSQKQ 345
                TE   N YN++     +     +  ++   + Y +Q+Q
Sbjct: 201 YENSRTEYSRNEYNNRGYYGNNNNNENSYEFDNSMEGYQNQEQ 243



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
 Frame = +1

Query: 37  NGGNMYNYNSQKQEQFVGTNGGNMYNTQKQGMSDTRFLENG-------RYYHAGDNAYNS 195
           N  N Y YN             N YN ++QG+ DT   + G         Y+ GDN Y+S
Sbjct: 105 NNNNNYYYNK------------NSYNAKQQGLKDTVLYDTGYTTMSNRNNYYNGDNVYSS 152

Query: 196 QKQGMDEASLMETEDGGNMYNSQKQDMGDARFMENGRYNQGEDMYNSQKQGMGEARYSTT 375
                +  +     +  N YN+++Q M D RF+ENGRY       NS+K    E   S T
Sbjct: 153 SSSNNNNNN---NNNNNNGYNTKQQGMSDTRFLENGRYYYD---LNSEKNYRNEYENSRT 206

Query: 376 ANNGDMYNSQ 405
             + + YN++
Sbjct: 207 EYSRNEYNNR 216


>gb|AAB35284.1| arabinogalactan-protein [Nicotiana alata]
          Length = 461

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
 Frame = +1

Query: 4   NSQKQEQFVGTNGGNMY--NYNSQKQEQFVGTNGGNMYNT-----QKQGMSDTRFLENGR 162
           N+   E +   N  N +  NYN+         N  + YN      ++QG+SDTRFLENG+
Sbjct: 324 NNVFSENYNNNNNNNAFYENYNNNNNGYSENYNQASSYNNNDNTVERQGLSDTRFLENGK 383

Query: 163 YYHAGDNAYNSQKQGMDEASLMETEDGGNMYNSQKQDMGDARFMENGRY---NQGEDM 327
           YY+   N  N+   G  E     +    N    ++Q + D RF++NG Y   N GE M
Sbjct: 384 YYYDIKNE-NTNNNGYSENYNHVSSYNNNNNMVERQGLSDTRFLDNGNYFYSNNGEKM 440


>dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana]
          Length = 346

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 39/146 (26%)
 Frame = +1

Query: 4   NSQKQEQFVGTNGGNMYNYNSQKQEQFVGT------------NGGNMYNT---------- 117
           N++++E++   NGGN YN N+ +Q++F  T            N GN YN           
Sbjct: 199 NNEEEEEYYNNNGGNTYNNNNNEQQEFSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTN 258

Query: 118 --------------QKQGMSDTRFLENGRYYH---AGDNAYNSQKQGMDEASLMETEDGG 246
                         Q+QGMSDTRFL NG++Y+   A  +A +  +   + A++ +  +  
Sbjct: 259 YNNYNTGKSNYRVHQQQGMSDTRFLGNGKFYYDINAEKHARDPYENAREFAAMNQQYNNR 318

Query: 247 NMYNSQKQDMGDARFMENGRYNQGED 324
           N Y + +  + + RF EN    Q ED
Sbjct: 319 NTYGNNEYSINNNRF-ENEEEFQVED 343



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
 Frame = +1

Query: 4   NSQKQEQFVGTNGGNMYNYNSQKQEQFVGTNGGNMYNTQKQGMSDTRFLENGRYYHAGDN 183
           N QKQ+QF   +G N Y+ N Q+Q+ +   NGGN YN       +    E   Y + G N
Sbjct: 163 NQQKQQQFY--SGDNFYSNNQQQQQDY---NGGNTYNNNDNNNEE----EEEYYNNNGGN 213

Query: 184 AYNSQKQGMDEAS---------LMETEDGGNMYNSQKQDMGDARFMENGRYNQGEDMYN- 333
            YN+      E S              + GN YN+  Q+   +    N  YN G+  Y  
Sbjct: 214 TYNNNNNEQQEFSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYNN--YNTGKSNYRV 271

Query: 334 SQKQGMGEARYSTTANNGDMY 396
            Q+QGM + R+     NG  Y
Sbjct: 272 HQQQGMSDTRF---LGNGKFY 289


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