BLASTX nr result

ID: Atractylodes21_contig00010428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010428
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   247   2e-63
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   246   3e-63
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   245   6e-63
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   245   6e-63
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   244   1e-62

>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  247 bits (630), Expect = 2e-63
 Identities = 127/182 (69%), Positives = 138/182 (75%), Gaps = 2/182 (1%)
 Frame = +1

Query: 52  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 231
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 57  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 116

Query: 232 KDMTQDATFEFERKRNRPERYDRNLTENTLKAIKTIDKVRFRREETHHKNRMKGXXXXXX 411
           KDMTQD+TFEFERKRNRPERYDRN+ ENTLKAIK IDKVR  RE  HH  RMKG      
Sbjct: 117 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 176

Query: 412 XXXXXXHDQQLHMVVAPGVTLGSLAKDSTSTPAKVKVKV-QHESEDNR-MEE*FG*ICFV 585
                  +Q +HMV AP V    L ++ + T  K+KVKV Q +SE+N  MEE     CF 
Sbjct: 177 REAAKELEQSIHMVKAPAV----LQQEPSLTLPKIKVKVSQQQSEENHAMEE-----CFS 227

Query: 586 AY 591
            Y
Sbjct: 228 TY 229


>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  246 bits (628), Expect = 3e-63
 Identities = 125/172 (72%), Positives = 134/172 (77%), Gaps = 2/172 (1%)
 Frame = +1

Query: 52  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 231
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 232 KDMTQDATFEFERKRNRPERYDRNLTENTLKAIKTIDKVRFRREETHHKNRMKGXXXXXX 411
           KDMTQD+TFEFERKRNRPERYDRNL EN LKAI  IDK+R  REE HHKNRMKG      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQ 120

Query: 412 XXXXXXHDQQLHMVVAPGVTLGSLAKDSTSTPAKVKVKV-QHESEDNR-MEE 561
                  +Q + +V AP V    L KD + T  K+KV V Q +SEDN  MEE
Sbjct: 121 MEAARELEQGISLVKAPSV----LQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  245 bits (626), Expect = 6e-63
 Identities = 123/172 (71%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
 Frame = +1

Query: 52  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 231
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 232 KDMTQDATFEFERKRNRPERYDRNLTENTLKAIKTIDKVRFRREETHHKNRMKGXXXXXX 411
           KDMTQD+TFEFERKRNRPERYDRNL EN LKAI  IDK+R  REE HHKNRMKG      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 412 XXXXXXHDQQLHMVVAPGVTLGSLAKDSTSTPAKVKVKV-QHESEDNR-MEE 561
                  +Q + +V AP V    L +D + T  K+KVKV Q +SE+N  MEE
Sbjct: 121 KEAVKELEQGISLVKAPSV----LQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  245 bits (626), Expect = 6e-63
 Identities = 124/172 (72%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
 Frame = +1

Query: 52  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 231
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 232 KDMTQDATFEFERKRNRPERYDRNLTENTLKAIKTIDKVRFRREETHHKNRMKGXXXXXX 411
           KDMTQD+TFEFERKRNRPERYDRN+ ENTLKAIK IDKVR  RE  HH  RMKG      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 412 XXXXXXHDQQLHMVVAPGVTLGSLAKDSTSTPAKVKVKV-QHESEDNR-MEE 561
                  +Q +HMV AP V    L ++ + T  K+KVKV Q +SE+N  MEE
Sbjct: 121 REAAKELEQSIHMVKAPAV----LQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  244 bits (623), Expect = 1e-62
 Identities = 123/172 (71%), Positives = 134/172 (77%), Gaps = 2/172 (1%)
 Frame = +1

Query: 52  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 231
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 232 KDMTQDATFEFERKRNRPERYDRNLTENTLKAIKTIDKVRFRREETHHKNRMKGXXXXXX 411
           KDMTQD+TFEFERKRNRPERYDRNL EN LK I  IDK+R  REE HHKNRMKG      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 412 XXXXXXHDQQLHMVVAPGVTLGSLAKDSTSTPAKVKVKV-QHESEDNR-MEE 561
                  +Q + +V AP V    L +D + T  K+KVKV Q +SE+N  MEE
Sbjct: 121 KEAVKELEQGISLVKAPSV----LQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


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