BLASTX nr result

ID: Atractylodes21_contig00010359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010359
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin...   210   1e-55
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   190   8e-50
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-46
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin...   184   3e-46
ref|XP_002533458.1| conserved hypothetical protein [Ricinus comm...   179   2e-45

>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
           vinifera] gi|147768909|emb|CAN75883.1| hypothetical
           protein VITISV_024456 [Vitis vinifera]
          Length = 296

 Score =  210 bits (535), Expect(2) = 1e-55
 Identities = 111/168 (66%), Positives = 128/168 (76%), Gaps = 3/168 (1%)
 Frame = +1

Query: 310 HYVPGGYSAVKQFTNVGGGPLG---RKAPMQQQPFADGPATPVKSKLCNKINTPEGCKFG 480
           HYVPGGYSAV Q TN+GG P      + PM      DGP T VK+++CNK NTPEGCKFG
Sbjct: 61  HYVPGGYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPT-VKTRICNKFNTPEGCKFG 119

Query: 481 DKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQSATA 660
           DKC FAH E+ELG +   P++ED RA  GP   GG   G +E  PPGLAAAA+FG SATA
Sbjct: 120 DKCHFAHGELELG-RPIVPTHEDPRAM-GPM--GGRLAGRLEAPPPGLAAAASFGASATA 175

Query: 661 KISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELE 804
           KIS+DASLAG IIGKGGVNSKQICRLTGVKL+I++H++D NQRNIELE
Sbjct: 176 KISVDASLAGAIIGKGGVNSKQICRLTGVKLSIKEHESDPNQRNIELE 223



 Score = 32.7 bits (73), Expect(2) = 1e-55
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +3

Query: 111 MEFGGRKRGRQDGG--WNGAPKRPRDEMESFT 200
           ME GG++RGR DG    NG  K+ + E ESF+
Sbjct: 1   MEVGGKRRGRPDGAAFGNGGFKKSKQETESFS 32


>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Vitis vinifera]
          Length = 301

 Score =  190 bits (482), Expect(2) = 8e-50
 Identities = 104/169 (61%), Positives = 118/169 (69%), Gaps = 4/169 (2%)
 Frame = +1

Query: 310 HYVPGGYSAVKQFTNVGGG-PLGRKA--PMQQQPFADGPATP-VKSKLCNKINTPEGCKF 477
           HYVPGG  AV Q  N+GG  PL   A  P     F DG + P VK++LCNK N+ EGCKF
Sbjct: 62  HYVPGGIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCKF 121

Query: 478 GDKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQSAT 657
           GDKC FAH E ELG K + PS+ +     G     G   G +EP PPGLAAAA+FG SAT
Sbjct: 122 GDKCHFAHGEWELG-KPTLPSHHEDHRGMG----SGRLAGRLEPPPPGLAAAASFGASAT 176

Query: 658 AKISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELE 804
           AKIS+DASLAG IIGK GVNSKQICRLTG KL+I+DHD+D N RNIELE
Sbjct: 177 AKISVDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELE 225



 Score = 33.9 bits (76), Expect(2) = 8e-50
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
 Frame = +3

Query: 111 MEFGG-RKRGRQDG--GWNGAPKRPRDEMESFT 200
           ME GG RKRGRQ+G    NG  K+ + EMESF+
Sbjct: 1   MELGGARKRGRQEGTLNGNGGFKKSKQEMESFS 33


>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  179 bits (454), Expect(2) = 3e-46
 Identities = 100/170 (58%), Positives = 112/170 (65%), Gaps = 5/170 (2%)
 Frame = +1

Query: 310 HYVPGGYSAVKQFTNVGGGPL----GRKAPMQQQPFADGPATP-VKSKLCNKINTPEGCK 474
           HYVPGG+ AV Q  NVGG P      R   +    + D  + P VKS+LCNK NT EGCK
Sbjct: 63  HYVPGGFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTVEGCK 122

Query: 475 FGDKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQSA 654
           FGDKC FAH E ELG  S+ PSYED RA  GP    G     ME    G  AAA+FG SA
Sbjct: 123 FGDKCHFAHGEWELGKASAAPSYEDPRAM-GPIP--GRMSRHMEHPHQGHGAAASFGSSA 179

Query: 655 TAKISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELE 804
           T KISIDASLAG IIGK GVNSK ICR+TG KL+IRDH+ D  +R+IELE
Sbjct: 180 TTKISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELE 229



 Score = 32.7 bits (73), Expect(2) = 3e-46
 Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
 Frame = +3

Query: 111 MEFGG--RKRGRQDGGWNG--APKRPRDEMESFT 200
           MEFGG  RKR R D  +NG    K+ R EMESF+
Sbjct: 1   MEFGGGHRKRTRNDAAFNGNGGHKKNRQEMESFS 34


>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Glycine max]
          Length = 297

 Score =  184 bits (468), Expect(2) = 3e-46
 Identities = 102/169 (60%), Positives = 118/169 (69%), Gaps = 4/169 (2%)
 Frame = +1

Query: 310 HYVPGGYSAVKQFTNVGGGPLGRKAPMQQQP--FADGPATPV-KSKLCNKINTPEGCKFG 480
           HYVPGG+ AV Q  NVG  P+  +      P  F DG + PV K++LCNK NT EGCKFG
Sbjct: 58  HYVPGGFKAVSQLINVGSNPVIPQVGRNPVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFG 117

Query: 481 DKCRFAHSEVELGSKSSFPSYEDSRAQPG-PTNYGGGYQGWMEPAPPGLAAAANFGQSAT 657
           DKC FAH E ELG  ++ PSYED R     P++  GG    +EP  P   AAA+FG SAT
Sbjct: 118 DKCHFAHGEWELGRPTA-PSYEDPRVMGQMPSSRVGGR---VEPPHPAHGAAASFGASAT 173

Query: 658 AKISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELE 804
           AKISI+ASLAG +IGK GVNSKQICR+TG KL+IRDHDTD N RNIELE
Sbjct: 174 AKISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELE 222



 Score = 27.3 bits (59), Expect(2) = 3e-46
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 126 RKRGRQDGGWN--GAPKRPRDEMESF 197
           RKRGR +  +N  G  K+ R EM+SF
Sbjct: 3   RKRGRHEAAFNFNGGAKKSRPEMDSF 28


>ref|XP_002533458.1| conserved hypothetical protein [Ricinus communis]
           gi|223526691|gb|EEF28927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  179 bits (453), Expect(2) = 2e-45
 Identities = 101/169 (59%), Positives = 114/169 (67%), Gaps = 4/169 (2%)
 Frame = +1

Query: 310 HYVPGGYSAVKQFTNVGGG----PLGRKAPMQQQPFADGPATPVKSKLCNKINTPEGCKF 477
           HYVPGGY+AV Q  N+G      P    AP    P    P+  VKS+LCNK NT EGCKF
Sbjct: 58  HYVPGGYNAVAQMMNLGPAVTSIPRNMPAPSPAIPNGSAPSA-VKSRLCNKYNTAEGCKF 116

Query: 478 GDKCRFAHSEVELGSKSSFPSYEDSRAQPGPTNYGGGYQGWMEPAPPGLAAAANFGQSAT 657
           GDKC FAH E ELG K   PS++D RA        G   G MEP PPG  +AA+FG SAT
Sbjct: 117 GDKCNFAHGEWELG-KPVVPSHDDPRAFG---TIPGRMGGRMEPPPPG--SAASFGASAT 170

Query: 658 AKISIDASLAGPIIGKGGVNSKQICRLTGVKLAIRDHDTDQNQRNIELE 804
           AKIS++ASLAG IIGKGGVNSKQICR TG KL+IR+H+TD N RNIE E
Sbjct: 171 AKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHETDPNVRNIEFE 219



 Score = 30.4 bits (67), Expect(2) = 2e-45
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 126 RKRGRQDGGWNGAPKRPRDEMESFT 200
           RKRGR D   NG  K+ R EM+SF+
Sbjct: 5   RKRGRNDFNVNGGFKKSRKEMDSFS 29


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