BLASTX nr result

ID: Atractylodes21_contig00010358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010358
         (1710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein lig...   412   e-112
ref|XP_002326350.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106
ref|XP_002280999.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   391   e-106
emb|CAN69886.1| hypothetical protein VITISV_005072 [Vitis vinifera]   391   e-106
ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   389   e-105

>ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus] gi|449513666|ref|XP_004164388.1| PREDICTED:
            probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus]
          Length = 368

 Score =  412 bits (1058), Expect = e-112
 Identities = 207/277 (74%), Positives = 231/277 (83%), Gaps = 15/277 (5%)
 Frame = -2

Query: 1112 HDHHHR---MPMEPA-WVGGRYPCAPVMHPPTPYVDHQKAVTIRNDVNLKKETLKIEADE 945
            +DHHHR     M+PA WVGGRYP  P M P TPYV+HQKAVTIRNDVNLKKETLK+E DE
Sbjct: 86   YDHHHRGGHPQMDPAHWVGGRYPYGPPMPPQTPYVEHQKAVTIRNDVNLKKETLKVEPDE 145

Query: 944  ENPGKYLVSFTFDATVACSITLYFFAKEGEDCNLMAVEEESHPPISVSFQQGLGQKFRQT 765
            ENPG++LVSFTFDATVA SIT++FFAKEGEDCNL  V+E+   PI+V F+QGLGQKFRQ 
Sbjct: 146  ENPGQFLVSFTFDATVAGSITIFFFAKEGEDCNLTPVKEDIFQPITVHFEQGLGQKFRQP 205

Query: 764  PGTGIDLSTYEEAESSKGNEMNIYPLAVKAEAT------EDGNGV---TNSQITDAVFEK 612
             GTGID S +EE+E  K N+ ++YPL VKAEA+       DG  V    NSQIT AVFEK
Sbjct: 206  SGTGIDFSKFEESEFLKVNDTDVYPLVVKAEASTDTQTGPDGTPVPDPMNSQITQAVFEK 265

Query: 611  DKGVYKVRVVKQILWVNGIRYELQEIYGIGNS--GDFDGNDPGKECVICLSEPRDTTVLP 438
            DKG Y+VRV+KQILWVNG+RYELQEIYGIGNS  GD DGNDPGKECVICLSEPRDTTVLP
Sbjct: 266  DKGEYQVRVLKQILWVNGMRYELQEIYGIGNSVEGDVDGNDPGKECVICLSEPRDTTVLP 325

Query: 437  CRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 327
            CRHMCMCSGCAKVLRFQTNRCPICRQPV+RLLEI+V+
Sbjct: 326  CRHMCMCSGCAKVLRFQTNRCPICRQPVDRLLEIRVS 362


>ref|XP_002326350.1| predicted protein [Populus trichocarpa] gi|222833543|gb|EEE72020.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  392 bits (1006), Expect = e-106
 Identities = 200/274 (72%), Positives = 222/274 (81%), Gaps = 12/274 (4%)
 Frame = -2

Query: 1112 HDHHHRMPMEPA-WVGGRYPCAPVMHPPTPYVDHQKAVTIRNDVNLKKETLKIEADEENP 936
            +DHHHR+    A WV GR    P+M  P PYV+HQKAVTIRNDVNLKKE+L+IE DEENP
Sbjct: 9    YDHHHRVDHPAAHWVSGR---CPMMPQPAPYVEHQKAVTIRNDVNLKKESLRIEPDEENP 65

Query: 935  GKYLVSFTFDATVACSITLYFFAKEGEDCNLMAVEEESHPPISVSFQQGLGQKFRQTPGT 756
            G YLV+FTFDATVA SIT+ FFAKEGEDC L   +    PP++V+FQQGLGQKFRQ  GT
Sbjct: 66   GSYLVTFTFDATVAGSITIIFFAKEGEDCILTPTKAYLLPPVTVNFQQGLGQKFRQPSGT 125

Query: 755  GIDLSTYEEAESSKGNEMNIYPLAVKAEAT------EDGN---GVTNSQITDAVFEKDKG 603
            GID + +EE E  K  EM+ YPLAVKAEA+       +GN   G TNSQIT AVFEK+KG
Sbjct: 126  GIDFTLFEEKELVKEGEMDAYPLAVKAEASPANRKGTEGNQMSGATNSQITHAVFEKEKG 185

Query: 602  VYKVRVVKQILWVNGIRYELQEIYGIGNS--GDFDGNDPGKECVICLSEPRDTTVLPCRH 429
             Y+VRV+KQILWVNGIRYELQEIYGIG+S  GD D NDPGKECVICLSEPRDTTVLPCRH
Sbjct: 186  EYQVRVMKQILWVNGIRYELQEIYGIGDSVDGDVDANDPGKECVICLSEPRDTTVLPCRH 245

Query: 428  MCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 327
            MCMCSGCAKVLRFQTNRCPICRQPV+RLLEIKVN
Sbjct: 246  MCMCSGCAKVLRFQTNRCPICRQPVDRLLEIKVN 279


>ref|XP_002280999.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Vitis vinifera]
          Length = 362

 Score =  391 bits (1005), Expect = e-106
 Identities = 200/280 (71%), Positives = 228/280 (81%), Gaps = 18/280 (6%)
 Frame = -2

Query: 1112 HDHHHR----MPMEPA---WVGGRYPCAPVMHPPTPYVDHQKAVTIRNDVNLKKETLKIE 954
            +DHHHR      M+PA   +V GRY C PV+ P  PYV+HQKAVTIRNDVNLKKETL++E
Sbjct: 79   YDHHHRGGPPPHMDPAHANFVAGRYSCGPVVPPHAPYVEHQKAVTIRNDVNLKKETLRLE 138

Query: 953  ADEENPGKYLVSFTFDATVACSITLYFFAKEGEDCNLMAVEEESHPPISVSFQQGLGQKF 774
             DEE+PG++LV+FTFDATV  SIT+ FFAKEGEDC+L  ++E   P ++V FQQGLGQKF
Sbjct: 139  PDEEHPGRFLVAFTFDATVPGSITIIFFAKEGEDCSLSPMKENLEP-VTVHFQQGLGQKF 197

Query: 773  RQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAEATE------DGN---GVTNSQITDAV 621
            RQ  GTGID ST+EE+E  K  +M++YPL VKAEA+       DGN   G  NSQIT AV
Sbjct: 198  RQPTGTGIDFSTFEESELLKEGDMDVYPLEVKAEASPINQIGADGNPIPGTMNSQITKAV 257

Query: 620  FEKDKGVYKVRVVKQILWVNGIRYELQEIYGIGNS--GDFDGNDPGKECVICLSEPRDTT 447
            FEK+KG Y+VRVVKQILWVNG+RYELQEIYGIGNS  GDFD NDPGKECVICLSEPRDTT
Sbjct: 258  FEKEKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDGDFDSNDPGKECVICLSEPRDTT 317

Query: 446  VLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 327
            VLPCRHMCMCSGCAKVLRFQT+RCPICRQ VERLLEIKV+
Sbjct: 318  VLPCRHMCMCSGCAKVLRFQTDRCPICRQLVERLLEIKVS 357


>emb|CAN69886.1| hypothetical protein VITISV_005072 [Vitis vinifera]
          Length = 292

 Score =  391 bits (1005), Expect = e-106
 Identities = 200/280 (71%), Positives = 228/280 (81%), Gaps = 18/280 (6%)
 Frame = -2

Query: 1112 HDHHHR----MPMEPA---WVGGRYPCAPVMHPPTPYVDHQKAVTIRNDVNLKKETLKIE 954
            +DHHHR      M+PA   +V GRY C PV+ P  PYV+HQKAVTIRNDVNLKKETL++E
Sbjct: 9    YDHHHRGGPPPHMDPAHANFVAGRYSCGPVVPPHAPYVEHQKAVTIRNDVNLKKETLRLE 68

Query: 953  ADEENPGKYLVSFTFDATVACSITLYFFAKEGEDCNLMAVEEESHPPISVSFQQGLGQKF 774
             DEE+PG++LV+FTFDATV  SIT+ FFAKEGEDC+L  ++E   P ++V FQQGLGQKF
Sbjct: 69   PDEEHPGRFLVAFTFDATVPGSITIIFFAKEGEDCSLSPMKENLEP-VTVHFQQGLGQKF 127

Query: 773  RQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAEATE------DGN---GVTNSQITDAV 621
            RQ  GTGID ST+EE+E  K  +M++YPL VKAEA+       DGN   G  NSQIT AV
Sbjct: 128  RQPTGTGIDFSTFEESELLKEGDMDVYPLEVKAEASPINQIGADGNPIPGTMNSQITKAV 187

Query: 620  FEKDKGVYKVRVVKQILWVNGIRYELQEIYGIGNS--GDFDGNDPGKECVICLSEPRDTT 447
            FEK+KG Y+VRVVKQILWVNG+RYELQEIYGIGNS  GDFD NDPGKECVICLSEPRDTT
Sbjct: 188  FEKEKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDGDFDSNDPGKECVICLSEPRDTT 247

Query: 446  VLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 327
            VLPCRHMCMCSGCAKVLRFQT+RCPICRQ VERLLEIKV+
Sbjct: 248  VLPCRHMCMCSGCAKVLRFQTDRCPICRQLVERLLEIKVS 287


>ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 349

 Score =  389 bits (999), Expect = e-105
 Identities = 190/274 (69%), Positives = 224/274 (81%), Gaps = 13/274 (4%)
 Frame = -2

Query: 1112 HDHHHRMPMEPAWVGGRYPCAPVMHPPTPYVDHQKAVTIRNDVNLKKETLKIEADEENPG 933
            +DHHHR  ++P W  GRYP A     P PYV+HQKAVTI+NDVN+KKETL+IE D+ENPG
Sbjct: 73   YDHHHRTAVDPMW--GRYPVA-APPAPAPYVEHQKAVTIKNDVNIKKETLRIEPDDENPG 129

Query: 932  KYLVSFTFDATVACSITLYFFAKEGEDCNLMAVEEESHPPISVSFQQGLGQKFRQTPGTG 753
            ++LVSFTFDATV+ SIT+ FFAKEGE C L  ++E   PP++V+FQQGLGQKF+Q  GTG
Sbjct: 130  RFLVSFTFDATVSGSITILFFAKEGEGCTLTPMKENVLPPVTVNFQQGLGQKFKQPAGTG 189

Query: 752  IDLSTYEEAESSKGNEMNIYPLAVKAEATED-----------GNGVTNSQITDAVFEKDK 606
            ID ST+EE+E  K  +M++YP+A+KA+A+              +G +NSQIT AVFEK+K
Sbjct: 190  IDFSTFEESELLKVGDMDVYPVAIKADASSSDHDESKSNETPSSGSSNSQITQAVFEKEK 249

Query: 605  GVYKVRVVKQILWVNGIRYELQEIYGIGNS--GDFDGNDPGKECVICLSEPRDTTVLPCR 432
            G ++V+VVKQILWVNG+RYELQEIYGIGNS   D DGNDPGKECVICLSEPRDTTVLPCR
Sbjct: 250  GEFQVKVVKQILWVNGMRYELQEIYGIGNSVESDVDGNDPGKECVICLSEPRDTTVLPCR 309

Query: 431  HMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV 330
            HMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV
Sbjct: 310  HMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV 343


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