BLASTX nr result

ID: Atractylodes21_contig00010265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010265
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...    75   9e-15
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-14
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...    67   1e-12
emb|CBI38350.3| unnamed protein product [Vitis vinifera]               67   1e-12
ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   8e-12

>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 75.5 bits (184), Expect(2) = 9e-15
 Identities = 33/50 (66%), Positives = 45/50 (90%)
 Frame = +3

Query: 159 DIVSHRNQKSFTILNEADICQRQEDDIMKISAVLSISKVAAGILLRIYNW 308
           D++SHR+Q+++T+L+E DI QRQ+DD+M+I+ VLSISKVAA ILLR YNW
Sbjct: 52  DLISHRHQQNYTVLSEEDIRQRQDDDVMRIATVLSISKVAASILLRYYNW 101



 Score = 29.3 bits (64), Expect(2) = 9e-15
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +2

Query: 104 SDDCDAAYYDFIDNDS 151
           SDD D A Y+FIDNDS
Sbjct: 32  SDDADVADYEFIDNDS 47


>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 74.7 bits (182), Expect(2) = 2e-14
 Identities = 35/50 (70%), Positives = 44/50 (88%)
 Frame = +3

Query: 159 DIVSHRNQKSFTILNEADICQRQEDDIMKISAVLSISKVAAGILLRIYNW 308
           D++SHR Q+++TIL+E DI QRQ+DDIM+I+ VLSISKVAA ILLR YNW
Sbjct: 52  DLISHRYQQNYTILSEGDIRQRQDDDIMRIATVLSISKVAATILLRYYNW 101



 Score = 29.3 bits (64), Expect(2) = 2e-14
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +2

Query: 104 SDDCDAAYYDFIDNDS 151
           SDD D A Y+FIDNDS
Sbjct: 32  SDDADVADYEFIDNDS 47


>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +3

Query: 159 DIVSHRNQKSFTILNEADICQRQEDDIMKISAVLSISKVAAGILLRIYNW 308
           D+ SHR Q+++TIL EADI QRQEDDI +IS VLSI +V+A ILLR Y W
Sbjct: 113 DLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYW 162



 Score = 30.4 bits (67), Expect(2) = 1e-12
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 104 SDDCDAAYYDFIDNDS 151
           SDD DAA Y+FIDNDS
Sbjct: 93  SDDLDAADYEFIDNDS 108


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 67.4 bits (163), Expect(2) = 1e-12
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +3

Query: 159 DIVSHRNQKSFTILNEADICQRQEDDIMKISAVLSISKVAAGILLRIYNW 308
           D+ SHR Q+++TIL EADI QRQEDDI +IS VLSI +V+A ILLR Y W
Sbjct: 42  DLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYW 91



 Score = 30.4 bits (67), Expect(2) = 1e-12
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 104 SDDCDAAYYDFIDNDS 151
           SDD DAA Y+FIDNDS
Sbjct: 22  SDDLDAADYEFIDNDS 37


>ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Cucumis
           sativus]
          Length = 597

 Score = 67.4 bits (163), Expect(2) = 8e-12
 Identities = 33/50 (66%), Positives = 42/50 (84%)
 Frame = +3

Query: 159 DIVSHRNQKSFTILNEADICQRQEDDIMKISAVLSISKVAAGILLRIYNW 308
           D+VS+R+Q+++ IL EADI Q QE+DI ++S VLSISKVAA ILLR YNW
Sbjct: 59  DMVSYRHQQNYIILAEADIQQCQEEDITRVSTVLSISKVAASILLRYYNW 108



 Score = 27.3 bits (59), Expect(2) = 8e-12
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 104 SDDCDAAYYDFIDNDS 151
           SDD D   Y+F+DNDS
Sbjct: 39  SDDADVGDYEFVDNDS 54


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