BLASTX nr result

ID: Atractylodes21_contig00010166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010166
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17184.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containin...   118   4e-25
emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]   118   4e-25
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici...   117   7e-25
ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23

>emb|CBI17184.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/72 (77%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 SAAAAMMMGDKFHKFGRCRPDWSDFAAMGLGNS-NSSSRQIYLTFPADSTFKEEDVSNYF 38
           SAAAA+MMG++ HKFGRCRP+ +DF+ MGLG + N  SRQIYLTFPADSTF+EEDVSNYF
Sbjct: 235 SAAAALMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYF 294

Query: 37  SMFGPVQDVRIP 2
           S+FGPVQDVRIP
Sbjct: 295 SIFGPVQDVRIP 306


>ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Vitis vinifera]
          Length = 695

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/72 (77%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 SAAAAMMMGDKFHKFGRCRPDWSDFAAMGLGNS-NSSSRQIYLTFPADSTFKEEDVSNYF 38
           SAAAA+MMG++ HKFGRCRP+ +DF+ MGLG + N  SRQIYLTFPADSTF+EEDVSNYF
Sbjct: 315 SAAAALMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYF 374

Query: 37  SMFGPVQDVRIP 2
           S+FGPVQDVRIP
Sbjct: 375 SIFGPVQDVRIP 386


>emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
          Length = 697

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/72 (77%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 SAAAAMMMGDKFHKFGRCRPDWSDFAAMGLGNS-NSSSRQIYLTFPADSTFKEEDVSNYF 38
           SAAAA+MMG++ HKFGRCRP+ +DF+ MGLG + N  SRQIYLTFPADSTF+EEDVSNYF
Sbjct: 315 SAAAALMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYF 374

Query: 37  SMFGPVQDVRIP 2
           S+FGPVQDVRIP
Sbjct: 375 SIFGPVQDVRIP 386


>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223547433|gb|EEF48928.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/72 (76%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 SAAAAMMMGDKFHKFGRCRPDWSDFAAMGLGNS-NSSSRQIYLTFPADSTFKEEDVSNYF 38
           +AAAA+MMG++ HKFGRCRP+ +DF+AMGLG + N  SRQIYLTFPADSTF+EEDVSNYF
Sbjct: 330 AAAAALMMGEELHKFGRCRPERNDFSAMGLGGAMNPGSRQIYLTFPADSTFREEDVSNYF 389

Query: 37  SMFGPVQDVRIP 2
           S++GPVQDVRIP
Sbjct: 390 SIYGPVQDVRIP 401


>ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|222849760|gb|EEE87307.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/72 (75%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 SAAAAMMMGDKFHKFGRCRPDWSDFAAMGLGNSNS-SSRQIYLTFPADSTFKEEDVSNYF 38
           +AAAA+MMGD+ HKFGR RP+ SDF+ MGLG + S S+RQIYLTFPADSTF+EEDVS+YF
Sbjct: 316 AAAAALMMGDEIHKFGRIRPERSDFSQMGLGGAMSPSARQIYLTFPADSTFREEDVSSYF 375

Query: 37  SMFGPVQDVRIP 2
           S +GPVQDVRIP
Sbjct: 376 SFYGPVQDVRIP 387


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