BLASTX nr result

ID: Atractylodes21_contig00010151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010151
         (1441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD51364.1| D3-type cyclin [Malus x domestica]                     358   2e-96
ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   349   1e-93
dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]                       347   3e-93
ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|3...   346   8e-93
ref|XP_002326955.1| predicted protein [Populus trichocarpa] gi|1...   343   6e-92

>gb|ADD51364.1| D3-type cyclin [Malus x domestica]
          Length = 376

 Score =  358 bits (919), Expect = 2e-96
 Identities = 194/341 (56%), Positives = 252/341 (73%), Gaps = 19/341 (5%)
 Frame = +1

Query: 148  LLDSLYCEEKHQWEEE--------DDQEPVGSYTTCVDNENNIHTHTLFQQDLFWEDQEL 303
            LLD+LYC E H   E+        +++    S+ + V + N I    L +QDLFW+++EL
Sbjct: 21   LLDALYCSEVHLVGEQVSPVDYFPEEELVEDSFNSNVSSFNPIKAPILVEQDLFWDNEEL 80

Query: 304  SYLISKESQQ-------QLQNNLPGPWGNHRREAVEWILGVVSHYSFTALTAVLSVNYLD 462
              L+SKES+Q       Q+  +L G     RREAV+W+L V SHYSF+ALTAVL+ +Y D
Sbjct: 81   ISLLSKESEQNELQKPLQISPSLAGA----RREAVDWMLRVASHYSFSALTAVLAADYFD 136

Query: 463  RFLDGLEREKKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKM 642
            RFL  L+ + +K  PWMTQLAAV+C+SLAAKVEET VPLLLD Q+E SKYVFEA+TI++M
Sbjct: 137  RFLSSLQLQVEK--PWMTQLAAVACISLAAKVEETQVPLLLDFQVEDSKYVFEARTIKRM 194

Query: 643  EVLILSTLEWKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLP 822
            E+L+LSTL+W+MNPVTP+SF+DYITRRLGL+++L  E LKRCE +LL  + D RF  +LP
Sbjct: 195  EILVLSTLQWRMNPVTPISFIDYITRRLGLKNHLCWEVLKRCELILLNLISDSRFMYFLP 254

Query: 823  SVIATATMVHVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCS--RNGGRHF 996
            SV+ATATM+HV+ ++EPC+ IEYQ+QLLGILGINK++V +C K I E+T S     G+  
Sbjct: 255  SVVATATMLHVVKNMEPCLLIEYQTQLLGILGINKDKVDDCCKLISELTSSGGNGSGKQS 314

Query: 997  NKRKFGAVPGSPNAVMDLSFSSDES-CSVVTGSN-PSSPEP 1113
            NKRKFG+VPGSP+ VMD+SFSSD S  S  TGS+  SSPEP
Sbjct: 315  NKRKFGSVPGSPSGVMDVSFSSDSSNDSWATGSSVSSSPEP 355


>ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|355492139|gb|AES73342.1| Cyclin
            D3-1 [Medicago truncatula] gi|388511523|gb|AFK43823.1|
            unknown [Medicago truncatula]
          Length = 348

 Score =  349 bits (895), Expect = 1e-93
 Identities = 192/331 (58%), Positives = 241/331 (72%), Gaps = 9/331 (2%)
 Frame = +1

Query: 148  LLDSLYCEEKHQWEEEDDQEPVGSYTTCVDNENNIHTHT--LFQQDLFWEDQELSYLISK 321
            LLD+LYC E+H WEE+D+ E    Y     N   I+T T  L + D+FWED+EL  L++K
Sbjct: 11   LLDTLYCSEEH-WEEQDELE----YDNVSLNNTTINTTTCSLLETDMFWEDEELKSLLNK 65

Query: 322  ESQQQLQNNLPGP--WGNHRREAVEWILGVVSHYSFTALTAVLSVNYLDRFLDGLEREKK 495
            E Q  L   L         RRE++EWIL V +HYSF+ALT+VL+VNYLDRFL     + +
Sbjct: 66   EQQNPLYIFLQTNPVLETARRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNE 125

Query: 496  KKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLILSTLEWK 675
            K  PWMTQLAAV+CLSLAAK+EETHVPLLLDLQ+E S+Y+FEAKTI+KME+LILSTL WK
Sbjct: 126  K--PWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILILSTLGWK 183

Query: 676  MNPVTPLSFLDYITRRLGLRSYLSS-EFLKRCECLLLCFL-PDGRFKCYLPSVIATATMV 849
            MNP TPLSF+D+I RRLGL+ +L   EFLKRCE +LL  +  D +F  YLPSV+ATATMV
Sbjct: 184  MNPATPLSFIDFIIRRLGLKDHLICWEFLKRCEGVLLSVIRSDSKFMSYLPSVLATATMV 243

Query: 850  HVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFGAVPGS 1029
            HV NSVEP +G EYQ+QLLGILGINK++V EC K + ++      G   NKRKFG++P S
Sbjct: 244  HVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRKFGSIPSS 303

Query: 1030 PNAVMDLSFS---SDESCSVVTGSNPSSPEP 1113
            P  VM++SFS   S++S +++  S  SSPEP
Sbjct: 304  PKGVMEMSFSCDNSNDSWAIIAASVSSSPEP 334


>dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
          Length = 371

 Score =  347 bits (891), Expect = 3e-93
 Identities = 191/336 (56%), Positives = 245/336 (72%), Gaps = 14/336 (4%)
 Frame = +1

Query: 148  LLDSLYCEEKH----QWEEEDDQEPVGSYTTCVDNENNIHTHTLFQQDLFWEDQELSYLI 315
            +LD+LYC+E+H    + E+  D E    + +  DN  +     L +QDLFWED+EL+ L+
Sbjct: 22   VLDALYCQEQHLEGGETEDYFDSEEEDCHYS--DNIVSPKPPQLLEQDLFWEDEELTSLL 79

Query: 316  SKESQQQLQNNLPGP--WGNHRREAVEWILGVVSHYSFTALTAVLSVNYLDRFLDGLERE 489
            SKE +  L ++L      G  RR AVEW+L V +HYSF+ALTAVL+VNYLDRFL     +
Sbjct: 80   SKEQENPLFHSLETDPSLGGARRAAVEWLLKVNAHYSFSALTAVLAVNYLDRFLFSFHFQ 139

Query: 490  KKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLILSTLE 669
            ++K  PWMTQLAAV+CLSLAAKVEET VPLLLDLQ+E S+YVFEAKTIQ+ME+LILSTL+
Sbjct: 140  REK--PWMTQLAAVACLSLAAKVEETEVPLLLDLQVEDSRYVFEAKTIQRMEMLILSTLQ 197

Query: 670  WKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLPSVIATATMV 849
            WKMNPVTPLSFLD+ITRRLGL++ L  EFLKRCE +LLC + D RF  YLPSV++TATM+
Sbjct: 198  WKMNPVTPLSFLDHITRRLGLKNRLCCEFLKRCESILLCIISDSRFMLYLPSVLSTATML 257

Query: 850  HVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFGAVPGS 1029
             V +S+EPC+ +EYQ+QLLGIL I+K++V +C+K + E   S +G    NKRKF ++PGS
Sbjct: 258  LVFSSLEPCLAVEYQNQLLGILQIDKDKVEDCYKLMLE---STSGIHQSNKRKFRSMPGS 314

Query: 1030 PNAVMDLSFSSDE--------SCSVVTGSNPSSPEP 1113
            PN V D+ FSSD         S +  + S  SSPEP
Sbjct: 315  PNCVTDVCFSSDSSNDSWAVTSSASASASVCSSPEP 350


>ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|302142269|emb|CBI19472.3|
            unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  346 bits (888), Expect = 8e-93
 Identities = 199/335 (59%), Positives = 239/335 (71%), Gaps = 14/335 (4%)
 Frame = +1

Query: 148  LLDSLYCEEKHQWEEED------DQEPVGSYTTCVDNENNIHTHTLFQQDLFWEDQELSY 309
            LLD+LYCEE H WEEE       ++E   SY +     N      L + DL  ED+EL  
Sbjct: 19   LLDTLYCEENH-WEEEVREEGFLEEEEEESYYSDGSKPN---APPLLEPDLLCEDEELVS 74

Query: 310  LISKESQQQLQNNLPGPWGNH-----RREAVEWILGVVSHYSFTALTAVLSVNYLDRFLD 474
            L SKE +  L +N   P  N      R EAVEW+L V +HYSF+ALTAVL+VNY DRFL 
Sbjct: 75   LFSKEEKNDLHSN---PESNPLAAGARSEAVEWMLRVNAHYSFSALTAVLAVNYFDRFLF 131

Query: 475  GLEREKKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLI 654
              + + +K  PWMTQLAAV+CLSLAAKVEET VPLLLDLQ+E + YVFEAKTIQ+ME+++
Sbjct: 132  SCDVQGEK--PWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMV 189

Query: 655  LSTLEWKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLPSVIA 834
            LSTL WKMNPVTPLSFLDYITRRLGL+++L  EFLKRCE LLL  L D RF CYLPSVIA
Sbjct: 190  LSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERLLLSVLSDCRFGCYLPSVIA 249

Query: 835  TATMVHVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFG 1014
            TA M+HVI+SVEPCI ++YQSQLLGILGI+K++V +C + I +I  S     H NKRKF 
Sbjct: 250  TAIMLHVIDSVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIASSAR-CHHHNKRKFA 308

Query: 1015 AVPGSPNAVMDLSF---SSDESCSVVTGSNPSSPE 1110
            + PGSPN VMD  F   SS++S +V   S+PSS E
Sbjct: 309  STPGSPNGVMDGWFSCDSSNDSWAVAVSSSPSSSE 343


>ref|XP_002326955.1| predicted protein [Populus trichocarpa] gi|159025711|emb|CAN88856.1|
            D3-type cyclin [Populus trichocarpa]
            gi|222835270|gb|EEE73705.1| predicted protein [Populus
            trichocarpa]
          Length = 379

 Score =  343 bits (880), Expect = 6e-92
 Identities = 190/330 (57%), Positives = 237/330 (71%), Gaps = 8/330 (2%)
 Frame = +1

Query: 148  LLDSLYCEEKHQWEEEDD---QEPVGSYTTCVDNENNIHTHTLF-QQDLFWEDQELSYLI 315
            L D+LYC E++  EE  +   Q+ +   + C +N N ++T  +F +QDL WED+ELS L 
Sbjct: 25   LYDALYCSEENWVEEVREDCFQDELEGESYCSNNSNKLNTFPIFLEQDLSWEDEELSSLF 84

Query: 316  SKESQQQLQNNLPG--PWGNHRREAVEWILGVVSHYSFTALTAVLSVNYLDRFLDGLERE 489
            +KE Q QL  +L         R EAVEWIL V  HYSFTALTAVL+VNYLDRFL  +  +
Sbjct: 85   AKEEQNQLCKDLETNPSLARARCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQ 144

Query: 490  KKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLILSTLE 669
            K+K  PWM QLAAVSCLSLAAKVEET VPLLLD Q+E SKYVFEAKTIQ+ME+L+LSTL+
Sbjct: 145  KEK--PWMAQLAAVSCLSLAAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLK 202

Query: 670  WKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLPSVIATATMV 849
            WKMNPVTP+SFLDYITRRLGL  YL  EFLKRCE ++L  L D R   Y+PSV+A ATM+
Sbjct: 203  WKMNPVTPISFLDYITRRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATML 262

Query: 850  HVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFGAVPGS 1029
            +VI+++EP +  EYQSQLL ILGI+K++V +C K + E     +     NKRKF ++PGS
Sbjct: 263  YVIDNIEPSLAAEYQSQLLSILGIDKDKVEDCSKFLMEFALRYHFKLLSNKRKFCSLPGS 322

Query: 1030 PNAVMDLSFSSDESCS--VVTGSNPSSPEP 1113
            P+ V+D+SFSSD S     V  S  SSP+P
Sbjct: 323  PSGVVDVSFSSDSSNDSWSVASSVSSSPKP 352


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