BLASTX nr result

ID: Atractylodes21_contig00010116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00010116
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320523.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
emb|CAN64334.1| hypothetical protein VITISV_039730 [Vitis vinifera]    94   1e-17
ref|XP_002531012.1| ccaat-binding transcription factor subunit A...    93   2e-17
ref|XP_003634760.1| PREDICTED: nuclear transcription factor Y su...    92   3e-17
ref|XP_004139999.1| PREDICTED: nuclear transcription factor Y su...    92   4e-17

>ref|XP_002320523.1| predicted protein [Populus trichocarpa] gi|222861296|gb|EEE98838.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = +1

Query: 94  DSDNESGGHNAGGELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETV 246
           DSDNESGGHNA  ELSA+EQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 3   DSDNESGGHNAVSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETV 53


>emb|CAN64334.1| hypothetical protein VITISV_039730 [Vitis vinifera]
          Length = 1098

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/74 (74%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
 Frame = +1

Query: 37   FSIELRAN*FEFSIDGSNM--DSDNESGGHN--AGGELSAREQDRFLPIANVSRIMKKAL 204
            FS+E      EF+I  S+   DSDN SGGHN  AG ELS REQDRFLPIANVSRIMKKAL
Sbjct: 874  FSLEFE----EFAIVSSDSMADSDNXSGGHNNNAGSELSPREQDRFLPIANVSRIMKKAL 929

Query: 205  PANAKISKDAKETV 246
            PANAKISKDAKETV
Sbjct: 930  PANAKISKDAKETV 943


>ref|XP_002531012.1| ccaat-binding transcription factor subunit A, putative [Ricinus
           communis] gi|223529410|gb|EEF31372.1| ccaat-binding
           transcription factor subunit A, putative [Ricinus
           communis]
          Length = 182

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/53 (92%), Positives = 49/53 (92%), Gaps = 2/53 (3%)
 Frame = +1

Query: 94  DSDNESGGHN--AGGELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETV 246
           DSDNESGGHN  A  ELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 3   DSDNESGGHNNNANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETV 55


>ref|XP_003634760.1| PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis
           vinifera] gi|296089911|emb|CBI39730.3| unnamed protein
           product [Vitis vinifera]
          Length = 210

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/53 (90%), Positives = 49/53 (92%), Gaps = 2/53 (3%)
 Frame = +1

Query: 94  DSDNESGGHN--AGGELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETV 246
           DSDN+SGGHN  AG ELS REQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 3   DSDNDSGGHNNNAGSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 55


>ref|XP_004139999.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis
           sativus] gi|449475636|ref|XP_004154508.1| PREDICTED:
           nuclear transcription factor Y subunit B-3-like [Cucumis
           sativus]
          Length = 201

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/53 (90%), Positives = 49/53 (92%), Gaps = 2/53 (3%)
 Frame = +1

Query: 94  DSDNESGGHN--AGGELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETV 246
           DSDNESGGHN  A  ELSA+EQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 3   DSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETV 55


Top