BLASTX nr result
ID: Atractylodes21_contig00010104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00010104
(1313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 49 1e-19
emb|CAN76111.1| hypothetical protein VITISV_005526 [Vitis vinifera] 53 1e-17
gb|ABA94321.1| retrotransposon protein, putative, unclassified [... 52 7e-17
gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 43 1e-16
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group... 52 2e-16
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 48.9 bits (115), Expect(4) = 1e-19
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Frame = -3
Query: 834 TIRGWELLQLDVNNVFLYKDISEEVYMTGYPSGSTVSGGRLTAVLSTVVYQVVNLSTGCW 655
+I+GW L QLDVNN FL D+ E+VYM P G G L +Y + S W
Sbjct: 1067 SIQGWHLHQLDVNNAFLNGDLYEDVYMQ-LPPGFGRKGEHRVCKLHKSLYGLKQASRQ-W 1124
Query: 654 F---------------YSVLSLFYKGFGTDNVALLVYVDNIIVTG 565
F +S SLF + LLVYVD++I+ G
Sbjct: 1125 FLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAG 1169
Score = 44.3 bits (103), Expect(4) = 1e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 997 MHANQMWSIVPLPPRKNVAGCRWVYKLK 914
+ AN+ WS+VPLP K GC+WVYK+K
Sbjct: 992 LQANKTWSLVPLPSHKKPIGCKWVYKIK 1019
Score = 35.4 bits (80), Expect(4) = 1e-19
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 23/78 (29%)
Frame = -2
Query: 481 EVAHSKH--------YVLQLLEDVRLLAVKPSNTPLNPRFPWC---------------LI 371
EVA SK Y L+LLED L KPS P+ L+
Sbjct: 1201 EVARSKQGIVLCQRKYALELLEDAGFLGAKPSRFPVEQSLTLTRGDGAELKDASQYRRLV 1260
Query: 370 GRLLYLTLMTKHDVTFAV 317
GRL+YLT+ T+ D+ +AV
Sbjct: 1261 GRLIYLTI-TRPDLVYAV 1277
Score = 34.3 bits (77), Expect(4) = 1e-19
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1
Query: 914 KYGYDGNIE*HKARLVAKGFTQ 849
KY DG IE +KARLVAKGF+Q
Sbjct: 1019 KYNPDGTIERYKARLVAKGFSQ 1040
>emb|CAN76111.1| hypothetical protein VITISV_005526 [Vitis vinifera]
Length = 825
Score = 53.1 bits (126), Expect(4) = 1e-17
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = -3
Query: 825 GWELLQLDVNNVFLYKDISEEVYMTGYPSGSTVSGGRLTAVLSTVVYQVVNLSTGCWFYS 646
GW Q+D NN FL+ D+ EE+Y++ S G+L A+ ST Q +
Sbjct: 634 GWSFHQMDANNAFLHDDLHEEIYVS-VAMASITEEGKLEAIRSTGYAQ---------SRA 683
Query: 645 VLSLFYKGFGTDNVALLVYVDNIIVTG 565
SLF + G ALL+YVD+I++TG
Sbjct: 684 DYSLFTRKQGKSFTALLIYVDDILITG 710
Score = 40.0 bits (92), Expect(4) = 1e-17
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 997 MHANQMWSIVPLPPRKNVAGCRWVYKLKN 911
+ AN WS+ PL K GCRWVYK+K+
Sbjct: 556 LQANDTWSLTPLSTGKTPIGCRWVYKIKH 584
Score = 34.7 bits (78), Expect(4) = 1e-17
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 15/70 (21%)
Frame = -2
Query: 481 EVAHSKH-YVLQLLEDVRLLAVKPSNTPLNPRFPWC--------------LIGRLLYLTL 347
E+ S+H Y L+++EDV LL P +TP+ L+GRL+YLT
Sbjct: 749 EIFISQHKYALEIIEDVGLLGTTPIDTPMERGLKLSDKSDLLKDQGHYRRLVGRLIYLT- 807
Query: 346 MTKHDVTFAV 317
+++ ++T+AV
Sbjct: 808 VSRPNITYAV 817
Score = 28.1 bits (61), Expect(4) = 1e-17
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 914 KYGYDGNIE*HKARLVAKGFTQ 849
K+ DG+I+ +KA LV KGFTQ
Sbjct: 583 KHRSDGSIKRYKALLVVKGFTQ 604
>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1133
Score = 52.0 bits (123), Expect(4) = 7e-17
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Frame = -3
Query: 825 GWELLQLDVNNVFLYKDISEEVYMTGYPS-GSTVSGGRLTAVLSTVVYQVVNLSTGCWF- 652
GW L QLDV N FL+ D+ EEVYM P G++ + G++ + ++ + S WF
Sbjct: 844 GWPLHQLDVKNAFLHGDLHEEVYMEIPPGFGNSQTVGKVCKLKKSL--YGLKQSPRAWFD 901
Query: 651 ----------YSVL----SLFYKGFGTDNVALLVYVDNIIVTG 565
YS ++FYK GT L VYVD+I++TG
Sbjct: 902 RFRHAVCDMGYSQCNGDHTIFYKHRGTHITILAVYVDDIVITG 944
Score = 37.4 bits (85), Expect(4) = 7e-17
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 988 NQMWSIVPLPPRKNVAGCRWVYKLK 914
N+ W +V LPP K GC+WV+ +K
Sbjct: 769 NKTWELVKLPPEKRTVGCKWVFTVK 793
Score = 36.6 bits (83), Expect(4) = 7e-17
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Frame = -2
Query: 478 VAHSKHYVLQLLEDVRLLAVKPSNTPLNPRFPWC--------------LIGRLLYLTLMT 341
V + YVL LL D+ +L + S TP++ C L+GRL+YL T
Sbjct: 985 VLSQRKYVLDLLTDIGMLGCRASTTPIDRNHQLCAQSGDPVDKEAYQRLVGRLIYL-CHT 1043
Query: 340 KHDVTFAVTSYHNSWH 293
+ D+++AV+ H
Sbjct: 1044 RPDISYAVSVVSRYMH 1059
Score = 27.7 bits (60), Expect(4) = 7e-17
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 920 TQKYGYDGNIE*HKARLVAKGFTQS 846
T K +G ++ +KARLVAKG++Q+
Sbjct: 791 TVKQTPEGKVDRYKARLVAKGYSQT 815
>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 936
Score = 43.1 bits (100), Expect(4) = 1e-16
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Frame = -3
Query: 822 WELLQLDVNNVFLYKDISEEVYMTGYPSGSTVSGGRLTAVLSTVVYQVVNLSTGCWF--- 652
W L QLDV N FL+ D+ EEVYM P +T L +Y + S WF
Sbjct: 529 WPLHQLDVKNAFLHGDLQEEVYMEIPPGFATSQTEGKVLRLKKSLYG-LKQSPRAWFDRF 587
Query: 651 -YSVLSLFYKGFGTDNVA-----------LLVYVDNIIVTG 565
++ + YK D+ L+VYVD++I+TG
Sbjct: 588 RRAMCGMGYKQCNGDHTVFYRHNRGLKTILVVYVDDMIITG 628
Score = 39.7 bits (91), Expect(4) = 1e-16
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Frame = -2
Query: 478 VAHSKHYVLQLLEDVRLLAVKPSNTPLNPRFPWC--------------LIGRLLYLTLMT 341
V + YVL LL D +L +P++TP+ C L+GRL+YL T
Sbjct: 669 VLSQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPVNKERYQRLVGRLIYL-CHT 727
Query: 340 KHDVTFAVTSYHNSWH 293
+ D+T+AV+ H
Sbjct: 728 RPDITYAVSVVSRYMH 743
Score = 36.2 bits (82), Expect(4) = 1e-16
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 997 MHANQMWSIVPLPPRKNVAGCRWVYKLK 914
+ N+ W +VP P K V C+WVY +K
Sbjct: 450 LEKNKTWDLVPFPKGKKVVNCKWVYTVK 477
Score = 33.5 bits (75), Expect(4) = 1e-16
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1
Query: 920 TQKYGYDGNIE*HKARLVAKGFTQS 846
T K DGN+E +KARLVAKG++Q+
Sbjct: 475 TVKQNPDGNVERYKARLVAKGYSQT 499
>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1393
Score = 51.6 bits (122), Expect(4) = 2e-16
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Frame = -3
Query: 825 GWELLQLDVNNVFLYKDISEEVYMTGYPS-GSTVSGGRLTAVLSTVVYQVVNLSTGCWF- 652
GW L QLDV N FL+ D+ EEVYM P G++ + G++ + ++ + S WF
Sbjct: 985 GWPLHQLDVKNAFLHGDLHEEVYMEIPPGFGNSQTVGKVCKLKKSL--YGLKQSPRAWFD 1042
Query: 651 ----------YSVL----SLFYKGFGTDNVALLVYVDNIIVTG 565
YS ++FYK GT L VYVD+I++TG
Sbjct: 1043 RFRHAVCDMGYSQCNGDHTVFYKHRGTHITILAVYVDDIVITG 1085
Score = 37.4 bits (85), Expect(4) = 2e-16
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 988 NQMWSIVPLPPRKNVAGCRWVYKLK 914
N+ W +V LPP K GC+WV+ +K
Sbjct: 910 NKTWELVKLPPEKRAVGCKWVFTVK 934
Score = 35.4 bits (80), Expect(4) = 2e-16
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Frame = -2
Query: 478 VAHSKHYVLQLLEDVRLLAVKPSNTPLNPRFPWC--------------LIGRLLYLTLMT 341
V + YVL LL D +L + S TP++ C L+GRL+YL T
Sbjct: 1126 VLSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVDKEAYQRLVGRLIYL-CHT 1184
Query: 340 KHDVTFAVTSYHNSWH 293
+ D+++AV+ H
Sbjct: 1185 RPDISYAVSVVSRYMH 1200
Score = 27.7 bits (60), Expect(4) = 2e-16
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 920 TQKYGYDGNIE*HKARLVAKGFTQS 846
T K +G ++ +KARLVAKG++Q+
Sbjct: 932 TVKQTPEGKVDRYKARLVAKGYSQT 956