BLASTX nr result

ID: Atractylodes21_contig00009997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009997
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29927.3| unnamed protein product [Vitis vinifera]              104   9e-26
ref|XP_003624611.1| GATA transcription factor [Medicago truncatu...    91   1e-20
gb|ADL36690.1| GATA domain class transcription factor [Malus x d...    75   5e-12
ref|XP_003588383.1| GATA transcription factor [Medicago truncatu...    74   1e-11
ref|XP_004141141.1| PREDICTED: GATA transcription factor 9-like ...    74   1e-11

>emb|CBI29927.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  104 bits (259), Expect(2) = 9e-26
 Identities = 57/115 (49%), Positives = 68/115 (59%), Gaps = 17/115 (14%)
 Frame = -1

Query: 295 LVVPCKARSKRKRSPTC------WSQQ--------YLINSDPPSMQQACWLAESELILPK 158
           LV+P KARSKRKR+ T       W           ++ +SDPP +QQA WLA+SELI+PK
Sbjct: 103 LVIPGKARSKRKRATTITTSFSNWVHHLNPENQNLHITSSDPPLLQQAYWLADSELIVPK 162

Query: 157 K---STTPNXXXXXXXXXXXXXXXXXGRKCTHCLSQRTPQWRAGPQGPKTLCNAC 2
           K   S+  N                  R+CTHCL+QRTPQWRAGP GPKTLCNAC
Sbjct: 163 KEESSSNNNNNNNSMVKEEEEGSNGQPRRCTHCLAQRTPQWRAGPLGPKTLCNAC 217



 Score = 37.7 bits (86), Expect(2) = 9e-26
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = -3

Query: 542 LSIFVEDCLSSSGNCMPPAEKPQGTTFTAEGTNTSAEPKVKKETHS 405
           LSIFVEDCLSS+GNC+P  +            + SA PK  K   S
Sbjct: 52  LSIFVEDCLSSTGNCLPAPKNV---------ASDSATPKPSKPLQS 88


>ref|XP_003624611.1| GATA transcription factor [Medicago truncatula]
           gi|124365580|gb|ABN09814.1| Zinc finger, GATA-type
           [Medicago truncatula] gi|355499626|gb|AES80829.1| GATA
           transcription factor [Medicago truncatula]
          Length = 264

 Score = 90.5 bits (223), Expect(2) = 1e-20
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 22/118 (18%)
 Frame = -1

Query: 289 VPCKARSKRKR--------------SPTCWSQQYLINSDPPSMQQACWLAESELILPK-- 158
           VP KARSKRKR              S T   Q   + SDPP ++QA WLA+SEL++PK  
Sbjct: 98  VPGKARSKRKRLSAPRRPKDPLSILSNTLNPQNESLCSDPPLLKQAYWLADSELMVPKGE 157

Query: 157 KSTTPNXXXXXXXXXXXXXXXXXG------RKCTHCLSQRTPQWRAGPQGPKTLCNAC 2
           K  T +                 G      R+CTHCLSQRTPQWRAGP GPKTLCNAC
Sbjct: 158 KEVTKDCEVVEKERFDFEGFVNNGQNPIPTRRCTHCLSQRTPQWRAGPLGPKTLCNAC 215



 Score = 34.3 bits (77), Expect(2) = 1e-20
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -3

Query: 542 LSIFVEDCLSSSGNCMPPAEKPQGTTFTAEGTNTSAEPKVKKETHST 402
           LS+FVEDC SS  +C+      Q TT T     ++   K K+E + +
Sbjct: 48  LSVFVEDCFSSPQSCVLLPSSVQNTTSTVSSKPSNTVKKPKQEQNES 94


>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
 Frame = -1

Query: 289 VPCKARSKRKRSPTC-WSQQYLINSDPPSMQQACWLAESELILPK-----KSTTPNXXXX 128
           VP KARSKR R+  C W+ + L+ S P         AE+   LP      K T  +    
Sbjct: 183 VPAKARSKRSRAAPCNWTSRLLLLSTPEQSDVVVSAAEAASPLPPPSSTGKKTVKSAPKK 242

Query: 127 XXXXXXXXXXXXXGRKCTHCLSQRTPQWRAGPQGPKTLCNAC 2
                        GRKC HC + +TPQWR GP GPKTLCNAC
Sbjct: 243 KESQEGSGGGPGDGRKCMHCATDKTPQWRTGPMGPKTLCNAC 284


>ref|XP_003588383.1| GATA transcription factor [Medicago truncatula]
           gi|355477431|gb|AES58634.1| GATA transcription factor
           [Medicago truncatula]
          Length = 344

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -1

Query: 298 KLVVPCKARSKRKRSPTC-WSQQYLINSDPPSMQQACWLAESELILPKKS----TTPNXX 134
           +++VP KARSKR R P C WS + L+ S           +ESE ++P  +    T P   
Sbjct: 161 EVLVPAKARSKRTRGPPCDWSSRLLVLSQTTPSS-----SESEFLIPTPTLPTVTVPRKQ 215

Query: 133 XXXXXXXXXXXXXXXG--RKCTHCLSQRTPQWRAGPQGPKTLCNAC 2
                          G  R+C HC++ +TPQWR GP GPKTLCNAC
Sbjct: 216 AKTAPRRKDNDGGSGGDGRRCLHCMTDKTPQWRTGPNGPKTLCNAC 261


>ref|XP_004141141.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]
           gi|449529527|ref|XP_004171751.1| PREDICTED: GATA
           transcription factor 9-like [Cucumis sativus]
          Length = 290

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 32/128 (25%)
 Frame = -1

Query: 289 VPCKARSKRKR-SPTCWSQQYLIN--------------------SDPPSMQQACWLAESE 173
           VP KARSKR+R +P+  S   LI+                    +DP  +QQ  WLA+SE
Sbjct: 106 VPGKARSKRRRRTPSKMSVLPLISRRLRQLNLLQNKHSLQLTTSTDPLLLQQTYWLADSE 165

Query: 172 LILPKKST-----------TPNXXXXXXXXXXXXXXXXXGRKCTHCLSQRTPQWRAGPQG 26
           L+LP K+                                GR+C+HC +QRTPQWR+GP G
Sbjct: 166 LLLPPKARGGEREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLG 225

Query: 25  PKTLCNAC 2
           PKTLCNAC
Sbjct: 226 PKTLCNAC 233


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