BLASTX nr result

ID: Atractylodes21_contig00009981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009981
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   151   2e-34
ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   150   4e-34
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   126   8e-27
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   117   3e-24

>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score =  151 bits (381), Expect = 2e-34
 Identities = 101/254 (39%), Positives = 135/254 (53%), Gaps = 16/254 (6%)
 Frame = +1

Query: 178 MALVPTR---------LDSFHSPVYKLHVSTRLHFLRYCSYNPFKKHKVIASYESNSSNL 330
           MAL+P+R         LDSFHS        TRL F RY S N F+ H    +  + +SN 
Sbjct: 1   MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVARNTIASN- 51

Query: 331 NPTPPKKSKIVLRN---KKNEVGSIAESPILQSKVNNNGGWLEKWDDTHKQNWPKQAETV 501
           +  P +KS IV  N    + + G ++ S          G W++KW+  H+++ PK++  V
Sbjct: 52  STNPQRKSNIVFTNTPVSQYDSGGVSSS---------GGNWIDKWNGPHQKSHPKESRPV 102

Query: 502 FNYRYRDEFEXXXXXXXXXXXXXXXXXXXXXXXXTMEKIVEKLKKFGYVDDVXXXXXXXX 681
            NYR  +                           TMEKIVEKLKKFGY+DDV        
Sbjct: 103 MNYRNSETVSRSDGGSGGGS--------------TMEKIVEKLKKFGYMDDVKETKENVQ 148

Query: 682 XX----GSIEDIFYVEEGILPNARGGFSPESPLGVEDVFRGSDGKVRFPWEKPSPEDEEK 849
                 GSIEDIFY+EEGILPN +GGFS +SPLGVE+   G +G+VRFPWE+P  E+   
Sbjct: 149 ERIIEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDG-NGEVRFPWERPKVEE--- 204

Query: 850 RNSVKLKSKTCVAE 891
             SV++KS+T +AE
Sbjct: 205 -GSVRIKSRTSLAE 217


>ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score =  150 bits (380), Expect = 3e-34
 Identities = 98/246 (39%), Positives = 128/246 (52%), Gaps = 8/246 (3%)
 Frame = +1

Query: 178 MALVPTR---LDSFHSPVYKLHVSTRLHFLRYCSYNPFKKHKVIASYESNSSNLNPTPPK 348
           MALVP+R   +DSF S   K H  T L F RY S  P + H   + Y  + ++ NP+   
Sbjct: 1   MALVPSRQLYIDSFQSSFSKFH-GTPLQFFRYSSSFPLRSH---SGYACSITDKNPSTKS 56

Query: 349 KSKIVLRNKKNEVGSIAESPILQSKVNNNGGWLEKWDDTHKQNWPKQAETVFNYRYRDEF 528
            S    ++K                ++    W   W+  +KQN P+  + VF+YR  +  
Sbjct: 57  TSFPTDKSKT-------------LNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNS- 102

Query: 529 EXXXXXXXXXXXXXXXXXXXXXXXXTMEKIVEKLKKFGYVD-----DVXXXXXXXXXXGS 693
                                    TMEKIVEKLKK GY+D     +           GS
Sbjct: 103 ------------------NSSGSGSTMEKIVEKLKKHGYMDGDVNENKERMQERVIEKGS 144

Query: 694 IEDIFYVEEGILPNARGGFSPESPLGVEDVFRGSDGKVRFPWEKPSPEDEEKRNSVKLKS 873
           +EDIFYVEEG+LPNARGGFS ESPLGVEDVFR SDG+VRFPWEKP  E++E + + + KS
Sbjct: 145 VEDIFYVEEGMLPNARGGFSKESPLGVEDVFR-SDGEVRFPWEKPKKEEDEGKWTARSKS 203

Query: 874 KTCVAE 891
           +T +AE
Sbjct: 204 RTSLAE 209


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  150 bits (379), Expect = 4e-34
 Identities = 101/254 (39%), Positives = 134/254 (52%), Gaps = 16/254 (6%)
 Frame = +1

Query: 178 MALVPTR---------LDSFHSPVYKLHVSTRLHFLRYCSYNPFKKHKVIASYESNSSNL 330
           MAL+P+R         LDSFHS        TRL F RY S N F+ H    +  + +SN 
Sbjct: 1   MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVTRNTIASN- 51

Query: 331 NPTPPKKSKIVLRN---KKNEVGSIAESPILQSKVNNNGGWLEKWDDTHKQNWPKQAETV 501
           +  P +KS IV  N    + + G ++ S          G W++KW+  H+++ PK+   V
Sbjct: 52  STNPQRKSNIVFTNTPVSQYDSGGVSSS---------GGNWIDKWNGPHQKSHPKEXRPV 102

Query: 502 FNYRYRDEFEXXXXXXXXXXXXXXXXXXXXXXXXTMEKIVEKLKKFGYVDDVXXXXXXXX 681
            NYR  +                           TMEKIVEKLKKFGY+DDV        
Sbjct: 103 MNYRNSETVSRSDGGSGGGS--------------TMEKIVEKLKKFGYMDDVKETKENVQ 148

Query: 682 XX----GSIEDIFYVEEGILPNARGGFSPESPLGVEDVFRGSDGKVRFPWEKPSPEDEEK 849
                 GSIEDIFY+EEGILPN +GGFS +SPLGVE+   G +G+VRFPWE+P  E+   
Sbjct: 149 ERIIEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDG-NGEVRFPWERPKVEE--- 204

Query: 850 RNSVKLKSKTCVAE 891
             SV++KS+T +AE
Sbjct: 205 -GSVRIKSRTSLAE 217


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 835

 Score =  126 bits (316), Expect = 8e-27
 Identities = 92/241 (38%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
 Frame = +1

Query: 178 MALVPTR--LDSFHSPVYKLHVSTRLHFLRYCSYNPFKKHKVIASYESNSSNLNPTPPKK 351
           MALVPTR   DSFHS       S   H LR+C  N   +H           +L P+P   
Sbjct: 1   MALVPTRPFFDSFHS-------SPNFHSLRFC--NSLFRH-----------SLTPSP--- 37

Query: 352 SKIVLRNKKNEVGSIAESPILQSKVNNNGGWLEKWDD-THKQNWPKQAETVFNYRYRDEF 528
           +   LR K   +     +       + +  WL++W+D T+    PK    V +Y      
Sbjct: 38  NSTFLRRKPLFIFRCNPA----KSFSTDKHWLKRWNDPTNNHARPKPPCAVLDYS----- 88

Query: 529 EXXXXXXXXXXXXXXXXXXXXXXXXTMEKIVEKLKKFGYVDDVXXXXXXXXXXGSIEDIF 708
           E                        TM++IVEKLKKFGYV+D           GS+EDIF
Sbjct: 89  ENGHASKSGLASSDEEGGDGNTGGSTMDRIVEKLKKFGYVEDGIQNKERVIEKGSVEDIF 148

Query: 709 YVEEGILPNARGGFSPESPLGVEDVFRGSDGKVRFPWEKPSPEDEEKRNSVKLKSKTCVA 888
           YVEEG+LPN+RGGFS ESPLG    F   D +VRFPWEKP  E+ E+R S++ +SKT +A
Sbjct: 149 YVEEGMLPNSRGGFSSESPLGFGS-FGSDDREVRFPWEKPVVEELEERKSMRSRSKTSLA 207

Query: 889 E 891
           E
Sbjct: 208 E 208


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
           gi|449504099|ref|XP_004162252.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  117 bits (294), Expect = 3e-24
 Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
 Frame = +1

Query: 166 LHETMALVPTRLDSFHSPVYKLHVSTRLHFLRYCSYNPFKKHKVIASYESNSSNLNPTPP 345
           LH  +       D+F +  +  H+      L+Y S   F+     +S+   +++      
Sbjct: 4   LHSRLCHATNFFDTFQTEFHSSHI-----LLKYGSSVVFRNRSFCSSFYGLTTD------ 52

Query: 346 KKSKIVLRNKKNEVGSIAESPILQSKVNNN---GGWLEKWDDTHKQNWPKQAETVFNYRY 516
                   N  +     + +P+ +  +  N     W+++W++T K+N PK    V +Y  
Sbjct: 53  -----TFSNGISYGSLSSRTPVYRYNLRRNLSRVSWIDRWNETAKRNRPKPPRAVLDYPS 107

Query: 517 RDEFEXXXXXXXXXXXXXXXXXXXXXXXX--TMEKIVEKLKKFGYVDDVXXXXXXXXXX- 687
            DE E                          TMEKIV KLKKFGY+DD            
Sbjct: 108 SDENEVSISSTGFSKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYIDDENKEKGEERAIE 167

Query: 688 -GSIEDIFYVEEGILPNARGGFSPESPLGVEDVFRGSDGKVRFPWEKPSPEDEEKRNSVK 864
            GS+EDI Y+EEG+LPN RGGFS ESP+G E++F GSDG+VRFPWEKP  +++   +S +
Sbjct: 168 KGSVEDILYIEEGMLPNTRGGFSKESPMGDENMF-GSDGEVRFPWEKPKEKEDTHGDSTR 226


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