BLASTX nr result

ID: Atractylodes21_contig00009980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009980
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]          178   1e-42
ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloro...   178   2e-42
ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloro...   174   3e-41
ref|NP_201325.1| 50S ribosomal protein L29 [Arabidopsis thaliana...   173   5e-41
ref|XP_002864947.1| hypothetical protein ARALYDRAFT_919853 [Arab...   172   7e-41

>gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]
          Length = 178

 Score =  178 bits (452), Expect = 1e-42
 Identities = 97/142 (68%), Positives = 113/142 (79%), Gaps = 8/142 (5%)
 Frame = +1

Query: 73  PKTFLTSSNITHKSSFNGIRIAQVLPSPAVRTTTTRQS--------VVMMAKKEEELKEI 228
           PK  L++S+   KS+F+GIRI+ + P+         ++        VVMMAK+EEELKEI
Sbjct: 16  PKPILSASS---KSTFHGIRISHLCPARTALCARYVRNPSFFFFSLVVMMAKREEELKEI 72

Query: 229 RAKTTEEINDEIVDLKGELFMLRLQRSARNEFKSSEFRRMRKRVARMLTVKREREIEDGI 408
           R KTTEEIN+EIVDLKGELFMLRLQ+SARNEFKSSEFRRMRKR+ARMLTVKREREIE+GI
Sbjct: 73  RTKTTEEINEEIVDLKGELFMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGI 132

Query: 409 GVRQSRKLDRQWRKSIVPRPPP 474
             R SRKLDRQW+KSIV RPPP
Sbjct: 133 NKRLSRKLDRQWKKSIVVRPPP 154


>ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Vitis
           vinifera]
          Length = 161

 Score =  178 bits (451), Expect = 2e-42
 Identities = 94/122 (77%), Positives = 104/122 (85%)
 Frame = +1

Query: 109 KSSFNGIRIAQVLPSPAVRTTTTRQSVVMMAKKEEELKEIRAKTTEEINDEIVDLKGELF 288
           KSSFNGIRI      P+ R+ ++  SVVMMAK+EEELKEIRAKTTEE+N+EIVDLKGEL 
Sbjct: 24  KSSFNGIRIPTP-NKPSFRSPSSSSSVVMMAKREEELKEIRAKTTEELNEEIVDLKGELL 82

Query: 289 MLRLQRSARNEFKSSEFRRMRKRVARMLTVKREREIEDGIGVRQSRKLDRQWRKSIVPRP 468
           MLRLQ+S RNEFK SEF RMRKRVARMLTVKREREIE+GI  R SRKLDRQW+KSIV RP
Sbjct: 83  MLRLQKSVRNEFKPSEFGRMRKRVARMLTVKREREIEEGINKRLSRKLDRQWKKSIVVRP 142

Query: 469 PP 474
           PP
Sbjct: 143 PP 144


>ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Cucumis
           sativus] gi|449508367|ref|XP_004163294.1| PREDICTED: 50S
           ribosomal protein L29, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  174 bits (440), Expect = 3e-41
 Identities = 91/139 (65%), Positives = 110/139 (79%), Gaps = 5/139 (3%)
 Frame = +1

Query: 73  PKTFLTSSNITHKSSFNGIRIA-----QVLPSPAVRTTTTRQSVVMMAKKEEELKEIRAK 237
           P  FL S   T KSSFN ++I      ++ P  A        SVVMMAK+E+ELK+IR+K
Sbjct: 16  PSKFLNS---TSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSK 72

Query: 238 TTEEINDEIVDLKGELFMLRLQRSARNEFKSSEFRRMRKRVARMLTVKREREIEDGIGVR 417
           TTEEIN+E++DLKGEL MLRLQ+SARNEFKSSEFRRMRKR++RMLTV+REREIE+G+G R
Sbjct: 73  TTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEEGVGKR 132

Query: 418 QSRKLDRQWRKSIVPRPPP 474
            SRKLDR+W+KSIV RPPP
Sbjct: 133 LSRKLDRKWKKSIVVRPPP 151


>ref|NP_201325.1| 50S ribosomal protein L29 [Arabidopsis thaliana]
           gi|46397023|sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S
           ribosomal protein L29, chloroplastic; AltName:
           Full=CL29; Flags: Precursor gi|189096148|pdb|3BBO|Z
           Chain Z, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|10178184|dbj|BAB11658.1| 50S ribosomal
           protein L29 [Arabidopsis thaliana]
           gi|15028327|gb|AAK76640.1| putative 50S ribosomal
           protein L29 [Arabidopsis thaliana]
           gi|19310703|gb|AAL85082.1| putative 50S ribosomal
           protein L29 [Arabidopsis thaliana]
           gi|21553790|gb|AAM62883.1| 50S ribosomal protein L29
           [Arabidopsis thaliana] gi|222424203|dbj|BAH20060.1|
           AT5G65220 [Arabidopsis thaliana]
           gi|332010642|gb|AED98025.1| 50S ribosomal protein L29
           [Arabidopsis thaliana]
          Length = 173

 Score =  173 bits (438), Expect = 5e-41
 Identities = 88/134 (65%), Positives = 113/134 (84%), Gaps = 5/134 (3%)
 Frame = +1

Query: 88  TSSNITHKSSFNGIRI-----AQVLPSPAVRTTTTRQSVVMMAKKEEELKEIRAKTTEEI 252
           T+S  +  SSF+G+RI     A+V  +  + +++ + SVVMM+K+E ELKEIR+KTTE++
Sbjct: 19  TASATSTSSSFHGVRIQHQVSARVPAAATISSSSPKPSVVMMSKREAELKEIRSKTTEQL 78

Query: 253 NDEIVDLKGELFMLRLQRSARNEFKSSEFRRMRKRVARMLTVKREREIEDGIGVRQSRKL 432
            +E+VDLKGELFMLRLQ+SARNEFKSS+FRRM+K+VARMLTVKREREI++GI  R SRKL
Sbjct: 79  QEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTVKREREIKEGIKKRLSRKL 138

Query: 433 DRQWRKSIVPRPPP 474
           DRQW+KSIVPRPPP
Sbjct: 139 DRQWKKSIVPRPPP 152


>ref|XP_002864947.1| hypothetical protein ARALYDRAFT_919853 [Arabidopsis lyrata subsp.
           lyrata] gi|297310782|gb|EFH41206.1| hypothetical protein
           ARALYDRAFT_919853 [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  172 bits (437), Expect = 7e-41
 Identities = 90/133 (67%), Positives = 113/133 (84%), Gaps = 4/133 (3%)
 Frame = +1

Query: 88  TSSNITHKSSFNGIRIA-QV---LPSPAVRTTTTRQSVVMMAKKEEELKEIRAKTTEEIN 255
           T S  +  SSF+G+RI  QV   +P+ A  +++ + SVVMM+K+E ELKEIR+KTTE++ 
Sbjct: 19  TDSATSTSSSFHGVRIQPQVSARVPAAATISSSRKPSVVMMSKREAELKEIRSKTTEQLQ 78

Query: 256 DEIVDLKGELFMLRLQRSARNEFKSSEFRRMRKRVARMLTVKREREIEDGIGVRQSRKLD 435
           +E+VDLKGELFMLRLQ+SARNEFKSS+FRRM+K+VARMLTVKREREI++GI  R SRKLD
Sbjct: 79  EEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTVKREREIKEGIKKRLSRKLD 138

Query: 436 RQWRKSIVPRPPP 474
           RQW+KSIVPRPPP
Sbjct: 139 RQWKKSIVPRPPP 151


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