BLASTX nr result

ID: Atractylodes21_contig00009977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009977
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB71567.1| RTL5-like protein [Solanum chacoense]                   60   2e-07
ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002299860.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002520543.1| conserved hypothetical protein [Ricinus comm...    55   6e-06
ref|NP_200759.2| protein rotundifolia like 5 [Arabidopsis thalia...    55   6e-06

>gb|AEB71567.1| RTL5-like protein [Solanum chacoense]
          Length = 109

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
 Frame = +3

Query: 144 MEKKWKLSKQDACNDXXXXXXXXXXXXXQKGSSKSALQRXXXXXXXXXXXXXXXXR---- 311
           M++KWKLSK+D  N+                SSKS+L+R                     
Sbjct: 5   MDEKWKLSKEDPNNNSY------------NSSSKSSLRRSYSQHCPISSDPPLPRSYSQK 52

Query: 312 --------------AKSANFTTKCSSFTKEHKARFYILRRCVTMLLSWKKH--HNDS 434
                          +S+NF +KCS+  KE KA+FYI++RC+ ML+ W KH  H DS
Sbjct: 53  TSSSSKSRLSKSSSQRSSNFKSKCSTMAKEQKAKFYIVKRCIAMLVRWNKHDKHGDS 109


>ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|222850573|gb|EEE88120.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = +3

Query: 144 MEKKWKLSKQDACNDXXXXXXXXXXXXXQKGSSKSALQRXXXXXXXXXXXXXXXXRA-KS 320
           M +KWKLSK++  +              +  SSK+ L R                 + KS
Sbjct: 1   MAEKWKLSKKEGSSSFTRSFST------KSSSSKAPLLRSSSLKISSPKCPLPRSCSQKS 54

Query: 321 ANFTTKCSSFTKEHKARFYILRRCVTMLLSWKKH 422
           ++ + KCSS  KE KARFYI+RRCV ML+ W KH
Sbjct: 55  SSISRKCSSLAKEQKARFYIMRRCVAMLVCWHKH 88


>ref|XP_002299860.1| predicted protein [Populus trichocarpa] gi|222847118|gb|EEE84665.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = +3

Query: 144 MEKKWKLSKQDACNDXXXXXXXXXXXXXQKGSSKSALQRXXXXXXXXXXXXXXXXRA-KS 320
           M++KWKLSK++  +              +  SSK+ L R                 + K+
Sbjct: 1   MDEKWKLSKKEGSSSFTRSFST------KSSSSKAPLLRTSSLKSSSPKCPLPRSFSQKN 54

Query: 321 ANFTTKCSSFTKEHKARFYILRRCVTMLLSWKKH 422
           ++ + KCSS  KE KARFYI+RRCV ML+ W KH
Sbjct: 55  SSISHKCSSLAKEQKARFYIMRRCVAMLVCWHKH 88


>ref|XP_002520543.1| conserved hypothetical protein [Ricinus communis]
           gi|223540385|gb|EEF41956.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = +3

Query: 315 KSANFTTKCSSFTKEHKARFYILRRCVTMLLSWKKH 422
           KS++ + KCSS  KE KARFYI+RRCV ML+ W KH
Sbjct: 65  KSSSISRKCSSLAKEQKARFYIMRRCVAMLVCWHKH 100


>ref|NP_200759.2| protein rotundifolia like 5 [Arabidopsis thaliana]
           gi|21553697|gb|AAM62790.1| unknown [Arabidopsis
           thaliana] gi|42822069|tpg|DAA02289.1| TPA_exp: DVL18
           [Arabidopsis thaliana] gi|88900382|gb|ABD57503.1|
           At5g59510 [Arabidopsis thaliana]
           gi|332009816|gb|AED97199.1| protein rotundifolia like 5
           [Arabidopsis thaliana]
          Length = 144

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +3

Query: 315 KSANFTTKCSSFTKEHKARFYILRRCVTMLLSWKKHHNDS 434
           K A+ T KC +  KEHK+RFYI++RCV ML+ W KH  DS
Sbjct: 105 KGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWHKHACDS 144


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