BLASTX nr result

ID: Atractylodes21_contig00009954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009954
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514390.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    57   2e-06
ref|XP_002454042.1| hypothetical protein SORBIDRAFT_04g023620 [S...    56   3e-06
gb|ACN35246.1| unknown [Zea mays] gi|413937376|gb|AFW71927.1| pu...    54   1e-05

>ref|XP_002514390.1| conserved hypothetical protein [Ricinus communis]
           gi|223546487|gb|EEF47986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 85

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = -2

Query: 279 GSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHRKHTSCPFCCTLVF 118
           GS + +C IC  ++++ D + Q+SRC H+FH +C+ K L R + +CP C +LVF
Sbjct: 30  GSDENLCCICLVEFEEGDEVSQVSRCMHLFHLDCIAKWLQRHNFTCPLCRSLVF 83


>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 20/54 (37%), Positives = 33/54 (61%)
 Frame = -2

Query: 279 GSVDRMCFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHRKHTSCPFCCTLVF 118
           GS + +C +C  ++ ++ ++ QL RC HVFH EC+   L R   +CP C + +F
Sbjct: 69  GSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF 122


>ref|XP_002454042.1| hypothetical protein SORBIDRAFT_04g023620 [Sorghum bicolor]
           gi|241933873|gb|EES07018.1| hypothetical protein
           SORBIDRAFT_04g023620 [Sorghum bicolor]
          Length = 359

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 32/63 (50%)
 Frame = -2

Query: 261 CFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHRKHTSCPFCCTLVFSGISPVPCSSC* 82
           C +C  ++D DD L  L  C H FH EC+G  L R H +CP C   V     P P  +  
Sbjct: 121 CSVCLLEFDDDDALRLLPTCPHAFHPECIGLWLER-HATCPLCRASVLDAPPPPPAPAAA 179

Query: 81  KHQ 73
           +HQ
Sbjct: 180 QHQ 182


>gb|ACN35246.1| unknown [Zea mays] gi|413937376|gb|AFW71927.1| putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 347

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/62 (38%), Positives = 30/62 (48%)
 Frame = -2

Query: 261 CFICSADYDKDDVLCQLSRCGHVFHSECVGKLLHRKHTSCPFCCTLVFSGISPVPCSSC* 82
           C +C  ++D DD L  L  C H FH EC+G  L R H +CP C   V     P P +   
Sbjct: 119 CSVCLLEFDDDDALRLLPTCPHAFHPECIGLWLER-HATCPLCRASVLDDAPPAPAAQLE 177

Query: 81  KH 76
            H
Sbjct: 178 LH 179


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