BLASTX nr result
ID: Atractylodes21_contig00009930
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00009930 (1126 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28908.3| unnamed protein product [Vitis vinifera] 510 e-142 ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2... 482 e-134 ref|XP_002532772.1| pentatricopeptide repeat-containing protein,... 479 e-133 ref|XP_002892169.1| pentatricopeptide repeat-containing protein ... 475 e-132 ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar... 474 e-131 >emb|CBI28908.3| unnamed protein product [Vitis vinifera] Length = 658 Score = 510 bits (1313), Expect = e-142 Identities = 247/313 (78%), Positives = 284/313 (90%) Frame = +3 Query: 3 KPMEAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYG 182 + +E ++FENM +KG KANVA+YTAL+DAY K+G++ E I LFER+ EGF+PD+VTYG Sbjct: 345 RTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYG 404 Query: 183 VIVNVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVND 362 VIVN LCK+GRL+EA+ YFE C++N+VAVNAMFYSSLIDG GKAGR+DEAEK FEEMV Sbjct: 405 VIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVER 464 Query: 363 GCSRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEA 542 GC +DSYCYNALIDALAK+GK++EALVLFKRME EGCDQTVYTYTI+++GLF +HRNEEA Sbjct: 465 GCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEA 524 Query: 543 LKVWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACEDMINVL 722 LK+WDLMIDKGITPT AS R L+ GLCLSGKV+RACKILDELAPMGV+ ETA EDMINVL Sbjct: 525 LKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVL 584 Query: 723 VKAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMG 902 KAGR +QACKLADGIVDRGRE+PGRVRTILINALRKAGNA++AMKLMHSKIGIGYDRMG Sbjct: 585 CKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYDRMG 644 Query: 903 SIKRRVKFRMLVD 941 SIKRRVKFR+LVD Sbjct: 645 SIKRRVKFRVLVD 657 Score = 137 bits (346), Expect = 4e-30 Identities = 82/277 (29%), Positives = 137/277 (49%), Gaps = 1/277 (0%) Frame = +3 Query: 60 NVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYF 239 +V Y ++ Y K+G+ ++ + F + +PD++TY ++ G + + + Sbjct: 259 DVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLY 318 Query: 240 ELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKN 419 + E + + YS +I G K GR E +FE M GC + Y ALIDA KN Sbjct: 319 QEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKN 378 Query: 420 GKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASV 599 G ++EA+ LF+RM+ EG + TY +I+NGL R +EA++ ++ D + A Sbjct: 379 GNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFY 438 Query: 600 RVLATGLCLSGKVSRACKILDELAPMGVVIETACED-MINVLVKAGRVDQACKLADGIVD 776 L GL +G+V A K +E+ G ++ C + +I+ L K+G++++A L + Sbjct: 439 SSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEK 498 Query: 777 RGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIG 887 G + TILI+ L K E A+KL I G Sbjct: 499 EGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKG 535 Score = 118 bits (296), Expect = 2e-24 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 1/285 (0%) Frame = +3 Query: 12 EAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIV 191 E ++ M + G + ++ + L++ S IE R+FE + PD V+Y ++ Sbjct: 208 ELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMI 267 Query: 192 NVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCS 371 CK G ++A+ F + + + + Y +LI G D L++EM G Sbjct: 268 KGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLE 327 Query: 372 RDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKV 551 + Y+ +I L K+G+ E +F+ M +GC V YT +++ EA+ + Sbjct: 328 IPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINL 387 Query: 552 WDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETA-CEDMINVLVK 728 ++ M +G P + V+ GLC SG++ A + + V + +I+ L K Sbjct: 388 FERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGK 447 Query: 729 AGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKL 863 AGRVD+A K + +V+RG LI+AL K+G E A+ L Sbjct: 448 AGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVL 492 Score = 79.7 bits (195), Expect = 1e-12 Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 4/277 (1%) Frame = +3 Query: 42 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 221 QK + Y +L+D + S + V +F +GF ++ G +E Sbjct: 148 QKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVE 207 Query: 222 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 401 E + + +E+ + + ++ L++G + ++ AE++FE M D YN +I Sbjct: 208 ELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMI 267 Query: 402 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 581 K G +A+ F ME + TY ++ +++ + L ++ M ++G+ Sbjct: 268 KGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLE 327 Query: 582 PTAASVRVLATGLCLSGKVSRACKILDELAPMG----VVIETACEDMINVLVKAGRVDQA 749 + ++ GLC G+ + + + G V I TA +I+ K G V++A Sbjct: 328 IPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTA---LIDAYGKNGNVNEA 384 Query: 750 CKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMK 860 L + + G E +++N L K+G + A++ Sbjct: 385 INLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVE 421 >ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa] Length = 599 Score = 482 bits (1240), Expect = e-134 Identities = 234/313 (74%), Positives = 271/313 (86%) Frame = +3 Query: 3 KPMEAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYG 182 K +E Y +FE MIQKG K NVA+YTAL+D+ AK G++ E + LFER+ EG +PD VTYG Sbjct: 287 KCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYG 346 Query: 183 VIVNVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVND 362 V+VN +CK+GRL+EA+ Y E CR N VAVNAM YSSLIDG GKAGR+ EAEKLFEEMV Sbjct: 347 VVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKK 406 Query: 363 GCSRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEA 542 GC DSYCYNALIDALAK GK DEAL FKRME EGCDQTVYTYTI++NGLF +H+NEEA Sbjct: 407 GCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEA 466 Query: 543 LKVWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACEDMINVL 722 LK+WD+MIDKGITPTAA+ R L+ GLCLSGKV+RACK+LDELAPMGV+ ETA EDM+NVL Sbjct: 467 LKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDMLNVL 526 Query: 723 VKAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMG 902 KAGR+ +ACKLADG VDRGREIPGRVRT+LINALRKAGNA++A+KLMHSKIGIGYDRMG Sbjct: 527 CKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMG 586 Query: 903 SIKRRVKFRMLVD 941 S+KRRVKFR+LV+ Sbjct: 587 SVKRRVKFRILVE 599 Score = 129 bits (324), Expect = 1e-27 Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 1/305 (0%) Frame = +3 Query: 60 NVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYF 239 +V Y ++ Y + G ++ F + PD++TY ++ G + + + Sbjct: 201 DVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLY 260 Query: 240 ELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKN 419 EN + + YS +I G K G+ E +FE+M+ GC + Y ALID+ AK Sbjct: 261 HEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKC 320 Query: 420 GKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASV 599 G + EA++LF+RM+ EG + V TY +++N + R +EA++ + G+ A Sbjct: 321 GNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLY 380 Query: 600 RVLATGLCLSGKVSRACKILDELAPMGVVIETACED-MINVLVKAGRVDQACKLADGIVD 776 L GL +G+V A K+ +E+ G ++ C + +I+ L K G+ D+A + D Sbjct: 381 SSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMED 440 Query: 777 RGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMGSIKRRVKFRMLVDK*FCR 956 G + TI+IN L + E A+K+ I G + R + + + R Sbjct: 441 EGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVAR 500 Query: 957 PCCLI 971 C L+ Sbjct: 501 ACKLL 505 Score = 105 bits (261), Expect = 3e-20 Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 1/277 (0%) Frame = +3 Query: 60 NVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYF 239 NV+ +L+ ++ G +EE++ ++ + G +P TY ++N L + +E A R Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190 Query: 240 ELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKN 419 E+ K+ + + Y+++I G+ + G+ +A + F +M + D Y LI A Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250 Query: 420 GKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASV 599 G D L L+ M+ G + + Y++++ GL + + E V++ MI KG A Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310 Query: 600 RVLATGLCLSGKVSRACKILDELAPMGVVIETACED-MINVLVKAGRVDQACKLADGIVD 776 L G + A + + + G+ + ++N + K+GR+D+A + + Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV 370 Query: 777 RGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIG 887 G + + + LI+ L KAG A KL + G Sbjct: 371 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKG 407 Score = 70.5 bits (171), Expect = 7e-10 Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 6/215 (2%) Frame = +3 Query: 213 RLEEAIRYFELC-RENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCY 389 R + A+++F ++ K N Y S ID G LD + +F + G + Sbjct: 76 RPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAA 135 Query: 390 NALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMID 569 N+LI + G ++E L +++ M+ G + +++TY ++NGL N E A +V ++M + Sbjct: 136 NSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMEN 195 Query: 570 KGITPTAASVRVLATGLCLSGKVSRACK-----ILDELAPMGVVIETACEDMINVLVKAG 734 I P + + G C GK +A + L +AP + T +I G Sbjct: 196 GKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMT----LIQACYAEG 251 Query: 735 RVDQACKLADGIVDRGREIPGRVRTILINALRKAG 839 D L + + G EIP +++I L K G Sbjct: 252 DFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEG 286 Score = 58.5 bits (140), Expect = 3e-06 Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 1/226 (0%) Frame = +3 Query: 189 VNVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGC 368 ++VL G L+ F R +N +SLI FG G ++E ++ M +G Sbjct: 104 IDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGV 163 Query: 369 SRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALK 548 + YN L++ L + I+ A + + ME+ V TY ++ G + ++A + Sbjct: 164 EPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFE 223 Query: 549 VWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIET-ACEDMINVLV 725 + M + + P + L G + E+ G+ I A +I L Sbjct: 224 KFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLC 283 Query: 726 KAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKL 863 K G+ + + + ++ +G ++ + T LI++ K GN AM L Sbjct: 284 KEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLL 329 >ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 647 Score = 479 bits (1233), Expect = e-133 Identities = 234/313 (74%), Positives = 273/313 (87%) Frame = +3 Query: 3 KPMEAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYG 182 K +E YT+FENMI KG KANVA+YTAL+D+ AK G++ E + LF+R+ EG +PDEVTYG Sbjct: 334 KRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYG 393 Query: 183 VIVNVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVND 362 VIVN LCK+GRL+EA+ Y E C VAVNAMFYSSLIDG GK+GR+DEAE++F EMV Sbjct: 394 VIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKK 453 Query: 363 GCSRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEA 542 GC DSYCYNALIDALAK GKIDEAL L KRME +GCDQTVYTYTI++ GLF +HRNEEA Sbjct: 454 GCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEA 513 Query: 543 LKVWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACEDMINVL 722 L +WDLMIDKGITPTAA+ R L+TGLCLSGKV+RACKILDE+APMGV+ ETA +DMIN+L Sbjct: 514 LTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINIL 573 Query: 723 VKAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMG 902 KAGR+ +ACKLADGIVDRGREIPGRVRT+LINALRKAGNA++A+KLM SKIGIGYDRMG Sbjct: 574 CKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGYDRMG 633 Query: 903 SIKRRVKFRMLVD 941 S+KRRVKFR+LV+ Sbjct: 634 SVKRRVKFRILVE 646 Score = 126 bits (316), Expect = 1e-26 Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 1/320 (0%) Frame = +3 Query: 15 AYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVN 194 A +FE M +V Y ++ Y + G + + + PD++TY ++ Sbjct: 233 AERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQ 292 Query: 195 VLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSR 374 G + + + E + + YS +I G K G+ E +FE M++ GC Sbjct: 293 ACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKA 352 Query: 375 DSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVW 554 + Y ALID+ AK G + EA++LFKRM+ EG + TY +I+N L R +EAL+ Sbjct: 353 NVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYM 412 Query: 555 DLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACED-MINVLVKA 731 + KG+ A L GL SG+V A +I E+ G ++ C + +I+ L K Sbjct: 413 EFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKC 472 Query: 732 GRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMGSIK 911 G++D+A L+ + G + TILI L + E A+ L I G + Sbjct: 473 GKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAF 532 Query: 912 RRVKFRMLVDK*FCRPCCLI 971 R + + + R C ++ Sbjct: 533 RALSTGLCLSGKVARACKIL 552 Score = 107 bits (266), Expect = 7e-21 Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 36/317 (11%) Frame = +3 Query: 21 TLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVL 200 ++F + G V +L+ ++ G +EEV+ ++ R+ G +P +Y +VN L Sbjct: 165 SVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGL 224 Query: 201 CKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGR-------------------- 320 + +E A R FE+ K+ + + Y+++I G+ + G+ Sbjct: 225 VNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDK 284 Query: 321 ---------------LDEAEKLFEEMVNDGCSRDSYCYNALIDALAKNGKIDEALVLFKR 455 D L+ EM G + Y+ +I L K+GK E +F+ Sbjct: 285 ITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFEN 344 Query: 456 MESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASVRVLATGLCLSGK 635 M S+GC V YT +++ EA+ ++ M +G+ P + V+ LC SG+ Sbjct: 345 MISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGR 404 Query: 636 VSRACKILDELAPMGVVIETA-CEDMINVLVKAGRVDQACKLADGIVDRGREIPGRVRTI 812 + A + ++ + GV + +I+ L K+GRVD+A ++ +V +G Sbjct: 405 LDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNA 464 Query: 813 LINALRKAGNAEMAMKL 863 LI+AL K G + A+ L Sbjct: 465 LIDALAKCGKIDEALAL 481 Score = 84.7 bits (208), Expect = 4e-14 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 4/286 (1%) Frame = +3 Query: 42 QKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLE 221 QK N+ Y +L+D A +G ++ V +F + G + ++ G +E Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVE 196 Query: 222 EAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 401 E + + +EN + + Y+ L++G + ++ AE++FE M N D YN +I Sbjct: 197 EVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMI 256 Query: 402 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 581 + GK +A K ME TY ++ + + + L ++ M +KG+ Sbjct: 257 KGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLE 316 Query: 582 PTAASVRVLATGLCLSGKVSRACKILDELAPMG----VVIETACEDMINVLVKAGRVDQA 749 ++ GLC GK + + + G V I TA +I+ K G + +A Sbjct: 317 IPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTA---LIDSNAKCGNMGEA 373 Query: 750 CKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIG 887 L + G E +++N+L K+G + A++ M G G Sbjct: 374 MLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKG 419 Score = 83.6 bits (205), Expect = 8e-14 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 2/223 (0%) Frame = +3 Query: 225 AIRYFELC-RENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALI 401 AIR+F ++ K N Y SLID G LD + +F + G Y N+LI Sbjct: 127 AIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLI 186 Query: 402 DALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGIT 581 + G ++E L +++RM+ G + ++++Y ++NGL N E A +V+++M + I Sbjct: 187 KSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIG 246 Query: 582 PTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIE-TACEDMINVLVKAGRVDQACKL 758 P + + G C GK +A + L + V + +I G D L Sbjct: 247 PDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGL 306 Query: 759 ADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIG 887 + ++G EIP V +++I L K G + + I G Sbjct: 307 YHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKG 349 >ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 662 Score = 475 bits (1223), Expect = e-132 Identities = 224/314 (71%), Positives = 270/314 (85%), Gaps = 1/314 (0%) Frame = +3 Query: 12 EAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIV 191 E Y +FENMI+KG K NVA+YT L+D YAK+G +E+ IRL R+ EGF PD VTY V+V Sbjct: 345 EGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVV 404 Query: 192 NVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCS 371 N LCK GR+EEA+ YF+ CR N +A+N+MFYSSLIDG GKAGR+DEAE+LFEEM GC+ Sbjct: 405 NGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464 Query: 372 RDSYCYNALIDALAKNGKIDEALVLFKRMESE-GCDQTVYTYTIIMNGLFNKHRNEEALK 548 RDSYCYNALIDA K+GK+DEAL LFKRME E GCDQTVYTYTI+++G+F +HRNEEALK Sbjct: 465 RDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALK 524 Query: 549 VWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACEDMINVLVK 728 +WD+MIDKGITPTAA +R L+TGLCLSGKV+RACKILDELAPMGV+++ ACEDMIN L K Sbjct: 525 LWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCK 584 Query: 729 AGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMGSI 908 AGR+ +ACKLADGI +RGRE+PGR+RT++INALRK G A++AMKLMHSKIGIGY+RMGS+ Sbjct: 585 AGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSV 644 Query: 909 KRRVKFRMLVDK*F 950 KRRVKF L++ F Sbjct: 645 KRRVKFTTLLETCF 658 Score = 122 bits (306), Expect = 2e-25 Identities = 82/321 (25%), Positives = 148/321 (46%), Gaps = 2/321 (0%) Frame = +3 Query: 15 AYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVN 194 A +FE M K +V Y ++ Y K+G ++ + + ++G + D++TY ++ Sbjct: 241 AERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQ 300 Query: 195 VLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSR 374 + ++ E + V +S +I G K G+L+E +FE M+ G Sbjct: 301 ACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKP 360 Query: 375 DSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVW 554 + Y LID AK G +++A+ L RM EG + V TY++++NGL R EEA+ + Sbjct: 361 NVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYF 420 Query: 555 DLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACED-MINVLVKA 731 G+ + L GL +G+V A ++ +E++ G ++ C + +I+ K Sbjct: 421 QTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480 Query: 732 GRVDQACKLADGI-VDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMGSI 908 G+VD+A L + + G + TILI+ + K E A+KL I G + Sbjct: 481 GKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAAC 540 Query: 909 KRRVKFRMLVDK*FCRPCCLI 971 R + + + R C ++ Sbjct: 541 LRALSTGLCLSGKVARACKIL 561 Score = 120 bits (300), Expect = 8e-25 Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 1/285 (0%) Frame = +3 Query: 12 EAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIV 191 E ++ M + G + + Y LM+ + ++ R+FE + S KPD VTY ++ Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMI 264 Query: 192 NVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCS 371 CK G+ ++A+ + + + + Y ++I L++EM G Sbjct: 265 KGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQ 324 Query: 372 RDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKV 551 + ++ +I L K GK++E +F+ M +G V YT++++G E+A+++ Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRL 384 Query: 552 WDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETA-CEDMINVLVK 728 MID+G P + V+ GLC +G+V A G+ I + +I+ L K Sbjct: 385 LHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGK 444 Query: 729 AGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKL 863 AGRVD+A +L + + ++G LI+A K G + A+ L Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALAL 489 Score = 73.2 bits (178), Expect = 1e-10 Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 36/251 (14%) Frame = +3 Query: 249 RENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSRDSYCYNALIDALAKNGKI 428 ++ K N Y SL+D A +D + E+ N+LI + K G + Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMV 203 Query: 429 DEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVWDLMIDKGITPTAASVRVL 608 +E L ++++M+ G + T+YTY +MNGL + + A +V+++M I P + + Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTM 263 Query: 609 ATGLCLSGKVSRACKILDELAPMGV---------VIETACED------------------ 707 G C +G+ +A + L + G+ +I+ D Sbjct: 264 IKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGL 323 Query: 708 ---------MINVLVKAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMK 860 +I L K G++++ + + ++ +G + + T+LI+ K G+ E A++ Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIR 383 Query: 861 LMHSKIGIGYD 893 L+H I G++ Sbjct: 384 LLHRMIDEGFN 394 >ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03560, mitochondrial; Flags: Precursor gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 660 Score = 474 bits (1219), Expect = e-131 Identities = 224/314 (71%), Positives = 269/314 (85%), Gaps = 1/314 (0%) Frame = +3 Query: 12 EAYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIV 191 E YT+FENMI+KG K NVA+YT L+D YAKSG +E+ IRL R+ EGFKPD VTY V+V Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404 Query: 192 NVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCS 371 N LCK GR+EEA+ YF CR + +A+N+MFYSSLIDG GKAGR+DEAE+LFEEM GC+ Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464 Query: 372 RDSYCYNALIDALAKNGKIDEALVLFKRMESE-GCDQTVYTYTIIMNGLFNKHRNEEALK 548 RDSYCYNALIDA K+ K+DEA+ LFKRME E GCDQTVYTYTI+++G+F +HRNEEALK Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 524 Query: 549 VWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACEDMINVLVK 728 +WD+MIDKGITPTAA R L+TGLCLSGKV+RACKILDELAPMGV+++ ACEDMIN L K Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCK 584 Query: 729 AGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMGSI 908 AGR+ +ACKLADGI +RGRE+PGR+RT++INALRK G A++AMKLMHSKIGIGY+RMGS+ Sbjct: 585 AGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSV 644 Query: 909 KRRVKFRMLVDK*F 950 KRRVKF L++ F Sbjct: 645 KRRVKFTTLLETCF 658 Score = 116 bits (291), Expect = 9e-24 Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 2/321 (0%) Frame = +3 Query: 15 AYTLFENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVN 194 A +FE M K ++ Y ++ Y K+G ++ + + + G + D++TY ++ Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300 Query: 195 VLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVNDGCSR 374 + ++ E + V +S +I G K G+L+E +FE M+ G Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360 Query: 375 DSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEEALKVW 554 + Y LID AK+G +++A+ L RM EG V TY++++NGL R EEAL + Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420 Query: 555 DLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMGVVIETACED-MINVLVKA 731 G+ + L GL +G+V A ++ +E++ G ++ C + +I+ K Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480 Query: 732 GRVDQACKLADGI-VDRGREIPGRVRTILINALRKAGNAEMAMKLMHSKIGIGYDRMGSI 908 +VD+A L + + G + TIL++ + K E A+KL I G + Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540 Query: 909 KRRVKFRMLVDK*FCRPCCLI 971 R + + + R C ++ Sbjct: 541 FRALSTGLCLSGKVARACKIL 561 Score = 110 bits (274), Expect = 8e-22 Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 36/303 (11%) Frame = +3 Query: 63 VAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTYGVIVNVLCKTGRLEEAIRYFE 242 V+ AL+ ++ K G +EE++ ++ ++ G +P TY ++N L ++ A R FE Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246 Query: 243 LCRENKVAVNAMFYSSLIDGFGKAG--------------RLDEAEK-------------- 338 + ++ + + Y+++I G+ KAG R EA+K Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306 Query: 339 -------LFEEMVNDGCSRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYT 497 L++EM G + ++ +I L K GK++E +F+ M +G V YT Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366 Query: 498 IIMNGLFNKHRNEEALKVWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPM 677 ++++G E+A+++ MID+G P + V+ GLC +G+V A Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426 Query: 678 GVVIETA-CEDMINVLVKAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMA 854 G+ I + +I+ L KAGRVD+A +L + + ++G LI+A K + A Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486 Query: 855 MKL 863 + L Sbjct: 487 IAL 489 Score = 90.1 bits (222), Expect = 9e-16 Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 5/295 (1%) Frame = +3 Query: 3 KPMEAYTLF-ENMIQKGRKANVAMYTALMDAYAKSGHIEEVIRLFERLNSEGFKPDEVTY 179 KP A++ F + QK N+ Y +L+D A + ++ + + + F Sbjct: 131 KPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAA 190 Query: 180 GVIVNVLCKTGRLEEAIRYFELCRENKVAVNAMFYSSLIDGFGKAGRLDEAEKLFEEMVN 359 ++ K G +EE + + +EN + Y+ L++G A +D AE++FE M + Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250 Query: 360 DGCSRDSYCYNALIDALAKNGKIDEALVLFKRMESEGCDQTVYTYTIIMNGLFNKHRNEE 539 D YN +I K G+ +A+ + ME+ G + TY ++ + Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310 Query: 540 ALKVWDLMIDKGITPTAASVRVLATGLCLSGKVSRACKILDELAPMG----VVIETACED 707 + ++ M +KGI + ++ GLC GK++ + + + G V I T Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV--- 367 Query: 708 MINVLVKAGRVDQACKLADGIVDRGREIPGRVRTILINALRKAGNAEMAMKLMHS 872 +I+ K+G V+ A +L ++D G + ++++N L K G E A+ H+ Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422