BLASTX nr result

ID: Atractylodes21_contig00009889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009889
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, ...    64   2e-08
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ...    63   2e-08
emb|CBI28691.3| unnamed protein product [Vitis vinifera]               57   2e-06
emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]    57   2e-06
ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloro...    55   5e-06

>sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor gi|4689034|emb|CAB41419.1| chloroplast
           ribosome recycling factor protein [Spinacia oleracea]
          Length = 271

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +2

Query: 383 RNATIKCATMEEIEAEKFLIETNARERMEKAIDSVLSNFNSIR 511
           R  T +CATMEE+EAEK LIETN ++RMEK I+++ SNFNS+R
Sbjct: 72  RAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVR 114


>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +2

Query: 380 KRNATIKCATMEEIEAEKFLIETNARERMEKAIDSVLSNFNSIR 511
           KR  T+KCATMEEIEAEK LIE + +ERMEK I++V ++FNSIR
Sbjct: 27  KRTGTLKCATMEEIEAEKSLIEKSVKERMEKTIENVKASFNSIR 70


>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +2

Query: 380 KRNATIKCATMEEIEAEKFLIETNARERMEKAIDSVLSNFNSIR 511
           KR    +CAT+EEIEAEK  IE + +ERMEK I++V +NFNSIR
Sbjct: 74  KRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIR 117


>emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
          Length = 222

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +2

Query: 380 KRNATIKCATMEEIEAEKFLIETNARERMEKAIDSVLSNFNSIR 511
           KR    +CAT+EEIEAEK  IE + +ERMEK I++V +NFNSIR
Sbjct: 74  KRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIR 117


>ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 270

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +2

Query: 383 RNATIKCATMEEIEAEKFLIETNARERMEKAIDSVLSNFNSIR 511
           R   ++ AT+EEIEAEK LIE + + RMEK ID+V SNFNSIR
Sbjct: 79  RRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIR 121


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