BLASTX nr result

ID: Atractylodes21_contig00009885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009885
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera] gi...   166   1e-39
ref|XP_002524914.1| rer1 protein, putative [Ricinus communis] gi...   159   2e-37
ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]       157   6e-37
ref|XP_002307281.1| predicted protein [Populus trichocarpa] gi|1...   156   2e-36
gb|AFK42932.1| unknown [Medicago truncatula]                          149   2e-34

>ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera]
           gi|296082366|emb|CBI21371.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/129 (62%), Positives = 96/129 (74%), Gaps = 7/129 (5%)
 Frame = +3

Query: 138 DLKSSS----LSQWTYSVSRRYQHLLDKSTPHVLHRWIGFALVFFIYALRVYFVXXXXXX 305
           DL SSS    +S+WT+ +SR+YQHLLDKSTPH+L+RWIGF  + FIY +RVYFV      
Sbjct: 13  DLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYIVRVYFVQGFYIV 72

Query: 306 XXXXXXXXXXXFLAFLSPQVDPELQ---DGPSLPTRGSEEFRPFVRRLPEFKFWYSLTRG 476
                       + FLSPQVDPE+Q   DGP+LPTRGS+EFRPFVRRLPEFKFWYS+T+ 
Sbjct: 73  SYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKA 132

Query: 477 FCIAFVLTF 503
           FCIAFV+TF
Sbjct: 133 FCIAFVMTF 141


>ref|XP_002524914.1| rer1 protein, putative [Ricinus communis]
           gi|223535749|gb|EEF37411.1| rer1 protein, putative
           [Ricinus communis]
          Length = 206

 Score =  159 bits (402), Expect = 2e-37
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = +3

Query: 156 LSQWTYSVSRRYQHLLDKSTPHVLHRWIGFALVFFIYALRVYFVXXXXXXXXXXXXXXXX 335
           +S+WT++VS+RYQHLLDK+ PHVL RWI   +V  IYALRVYFV                
Sbjct: 29  ISRWTFTVSQRYQHLLDKTVPHVLRRWIACLVVALIYALRVYFVQGFYIITYGLGIYMLN 88

Query: 336 XFLAFLSPQVDPELQDGPSLPTRGSEEFRPFVRRLPEFKFWYSLTRGFCIAFVLTF 503
             + FLSPQ+DPE+ DGP+LPTRGS+EFRPFVRRLPEFKFWYS+T+ FC+AF++TF
Sbjct: 89  LLIGFLSPQIDPEVLDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCVAFLMTF 144


>ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]
          Length = 191

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/124 (57%), Positives = 90/124 (72%)
 Frame = +3

Query: 132 DNDLKSSSLSQWTYSVSRRYQHLLDKSTPHVLHRWIGFALVFFIYALRVYFVXXXXXXXX 311
           D+    + +S+W ++VS++YQH+LDK+TPHVL RWIG  +V  +Y LRVY V        
Sbjct: 7   DDHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSY 66

Query: 312 XXXXXXXXXFLAFLSPQVDPELQDGPSLPTRGSEEFRPFVRRLPEFKFWYSLTRGFCIAF 491
                     + FLSPQVDPE+ DGP+LPTRGS+EFRPFVRRLPEFKFWYS+T+ FCIAF
Sbjct: 67  ALGIYILNLLIGFLSPQVDPEISDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAF 126

Query: 492 VLTF 503
           V+TF
Sbjct: 127 VMTF 130


>ref|XP_002307281.1| predicted protein [Populus trichocarpa] gi|118482911|gb|ABK93369.1|
           unknown [Populus trichocarpa]
           gi|222856730|gb|EEE94277.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/119 (57%), Positives = 89/119 (74%)
 Frame = +3

Query: 147 SSSLSQWTYSVSRRYQHLLDKSTPHVLHRWIGFALVFFIYALRVYFVXXXXXXXXXXXXX 326
           ++++S+W+++VSRRYQH LDK+ PH+L+RWI   +V  IYA+RVY V             
Sbjct: 23  ATTISRWSFAVSRRYQHFLDKTVPHILYRWISCLVVVLIYAIRVYLVQGFYIVTYGLGIY 82

Query: 327 XXXXFLAFLSPQVDPELQDGPSLPTRGSEEFRPFVRRLPEFKFWYSLTRGFCIAFVLTF 503
                + FLSPQ+DPE+ DGP+LPTRGS+EFRPFVRRLPEFKFWYS+T+  CIAFV+TF
Sbjct: 83  LLNLLIGFLSPQIDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKACCIAFVMTF 141


>gb|AFK42932.1| unknown [Medicago truncatula]
          Length = 192

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/122 (56%), Positives = 86/122 (70%), Gaps = 3/122 (2%)
 Frame = +3

Query: 147 SSSLSQWTYSVSRRYQHLLDKSTPHVLHRWIGFALVFFIYALRVYFVXXXXXXXXXXXXX 326
           ++++++W +  SRRYQH+LDKSTPHV  RW+G  +V  +Y LRVY V             
Sbjct: 9   AAAITRWKFEASRRYQHILDKSTPHVSQRWLGCLVVALVYVLRVYIVQGFYVVSYGLGIY 68

Query: 327 XXXXFLAFLSPQVDPELQD---GPSLPTRGSEEFRPFVRRLPEFKFWYSLTRGFCIAFVL 497
                + FLSPQVDPE+ D   GPSLPT GS+EFRPFVRRLPEFKFWYS+T+ FCIAFV+
Sbjct: 69  ILNLLIGFLSPQVDPEILDADNGPSLPTSGSDEFRPFVRRLPEFKFWYSITKAFCIAFVM 128

Query: 498 TF 503
           TF
Sbjct: 129 TF 130


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