BLASTX nr result

ID: Atractylodes21_contig00009830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009830
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...   312   6e-83
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...   309   7e-82
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...   306   4e-81
emb|CBI27822.3| unnamed protein product [Vitis vinifera]              301   1e-79
emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]   301   1e-79

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  312 bits (800), Expect = 6e-83
 Identities = 149/205 (72%), Positives = 182/205 (88%), Gaps = 2/205 (0%)
 Frame = -1

Query: 914 VSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQANAAEFPRDFLGISLPEQPSKY 735
           V++QIL EV+QCVESINGVKEG+WKAT+++Y+P+L++Q+ A E PRDFLGISLPEQP+KY
Sbjct: 17  VNTQILNEVTQCVESINGVKEGRWKATVTYYKPILRDQSQAPELPRDFLGISLPEQPNKY 76

Query: 734 YFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGKVVSIQSESL 555
           YF++RGQR+VLEADS+IQTIMEKLQSYK+RVAL FEGFQYQLGDFQLRVGKV    S++L
Sbjct: 77  YFIIRGQRIVLEADSSIQTIMEKLQSYKSRVALYFEGFQYQLGDFQLRVGKVTPTHSDNL 136

Query: 554 RGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYTL 375
           RGI+ME+EY P+SS +KS ++M EF DIWQEA+SKRSLPGHF+HMEPNF E+GLS  Y+ 
Sbjct: 137 RGIIMEVEYLPLSSIDKSRQVMEEFVDIWQEAISKRSLPGHFMHMEPNFVEYGLSDHYSS 196

Query: 374 QHTAVQYATIMLQMIAT--AQSVRN 306
           QHTAVQYAT+M Q+IAT   Q+ RN
Sbjct: 197 QHTAVQYATVMAQLIATQSVQAARN 221


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score =  309 bits (791), Expect = 7e-82
 Identities = 152/204 (74%), Positives = 178/204 (87%), Gaps = 1/204 (0%)
 Frame = -1

Query: 914 VSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQAN-AAEFPRDFLGISLPEQPSK 738
           V+SQIL EVSQCVESI+GVK GKWKATL+FY+P+L++Q + AAEFPRDFLGISLPEQP+K
Sbjct: 17  VNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFPRDFLGISLPEQPNK 76

Query: 737 YYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGKVVSIQSES 558
           YY ++RGQR+VLEAD TIQ IMEKLQSYK RVALNFEGFQYQLGDFQLRVGKVV   SE+
Sbjct: 77  YYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSEN 136

Query: 557 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 378
           LRGIVME+EY PISS EKS ++M EFFD+WQEA+SK SLPG F+H+E NF E+GLS  YT
Sbjct: 137 LRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKSSLPGRFMHIESNFAEYGLSDYYT 196

Query: 377 LQHTAVQYATIMLQMIATAQSVRN 306
            QHTAVQY  +M Q+IAT Q+V++
Sbjct: 197 SQHTAVQYGNVMAQLIATVQAVQS 220


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score =  306 bits (784), Expect = 4e-81
 Identities = 148/206 (71%), Positives = 179/206 (86%), Gaps = 3/206 (1%)
 Frame = -1

Query: 914 VSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQANAAEFPRDFLGISLPEQPSKY 735
           V+SQ++ EVSQCVESINGVKEG+WKATL+FY+P+ ++QA  AE+PRDFLGISLPEQP++Y
Sbjct: 17  VNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFRDQAVPAEYPRDFLGISLPEQPNRY 76

Query: 734 YFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGKVVSIQSESL 555
           YF++R Q++VLEADS+IQ IMEKLQSYK+RV+L FEGFQYQLGDFQLRVGKV    SE+L
Sbjct: 77  YFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQLGDFQLRVGKVAPSASENL 136

Query: 554 RGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYTL 375
           RGIV E+EY P+SS EKS +I+  F +IWQEA+SKRSLPGHF+H+EPNF EFGLS  YT 
Sbjct: 137 RGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNFAEFGLSDHYTS 196

Query: 374 QHTAVQYATIMLQMIA---TAQSVRN 306
           QHTAVQYAT+M Q+I+   TAQ VRN
Sbjct: 197 QHTAVQYATVMAQLISAVQTAQGVRN 222


>emb|CBI27822.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  301 bits (772), Expect = 1e-79
 Identities = 148/207 (71%), Positives = 179/207 (86%), Gaps = 4/207 (1%)
 Frame = -1

Query: 914 VSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLK-EQANAAEFPRDFLGISLPEQPSK 738
           V+SQ++ EVSQCVESINGVKEG+WKATL+FY+P+ + +QA  AE+PRDFLGISLPEQP++
Sbjct: 17  VNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFRADQAVPAEYPRDFLGISLPEQPNR 76

Query: 737 YYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGKVVSIQSES 558
           YYF++R Q++VLEADS+IQ IMEKLQSYK+RV+L FEGFQYQLGDFQLRVGKV    SE+
Sbjct: 77  YYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQLGDFQLRVGKVAPSASEN 136

Query: 557 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 378
           LRGIV E+EY P+SS EKS +I+  F +IWQEA+SKRSLPGHF+H+EPNF EFGLS  YT
Sbjct: 137 LRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNFAEFGLSDHYT 196

Query: 377 LQHTAVQYATIMLQMIA---TAQSVRN 306
            QHTAVQYAT+M Q+I+   TAQ VRN
Sbjct: 197 SQHTAVQYATVMAQLISAVQTAQGVRN 223


>emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]
          Length = 242

 Score =  301 bits (772), Expect = 1e-79
 Identities = 148/207 (71%), Positives = 179/207 (86%), Gaps = 4/207 (1%)
 Frame = -1

Query: 914 VSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLK-EQANAAEFPRDFLGISLPEQPSK 738
           V+SQ++ EVSQCVESINGVKEG+WKATL+FY+P+ + +QA  AE+PRDFLGISLPEQP++
Sbjct: 36  VNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFRADQAVPAEYPRDFLGISLPEQPNR 95

Query: 737 YYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGKVVSIQSES 558
           YYF++R Q++VLEADS+IQ IMEKLQSYK+RV+L FEGFQYQLGDFQLRVGKV    SE+
Sbjct: 96  YYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQLGDFQLRVGKVAPSASEN 155

Query: 557 LRGIVMEMEYRPISSWEKSHKIMGEFFDIWQEALSKRSLPGHFVHMEPNFGEFGLSGQYT 378
           LRGIV E+EY P+SS EKS +I+  F +IWQEA+SKRSLPGHF+H+EPNF EFGLS  YT
Sbjct: 156 LRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNFAEFGLSDHYT 215

Query: 377 LQHTAVQYATIMLQMIA---TAQSVRN 306
            QHTAVQYAT+M Q+I+   TAQ VRN
Sbjct: 216 SQHTAVQYATVMAQLISAVQTAQGVRN 242


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