BLASTX nr result

ID: Atractylodes21_contig00009824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009824
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   216   8e-54
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   209   6e-52
ref|XP_004143132.1| PREDICTED: transcription initiation factor I...   203   4e-50
ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|2...   199   8e-49
ref|XP_003597404.1| Transcription factor/ transcription initiati...   196   8e-48

>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
           gi|297746029|emb|CBI16085.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  216 bits (549), Expect = 8e-54
 Identities = 115/188 (61%), Positives = 127/188 (67%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3   PSQYRPGGYIPQQDGAADVIADKFEV--GQMSNSQPGI-IIADYEKPVLGLKLSS--RIP 167
           PSQY   GYIPQQDGA D   + FEV   Q SNS  G  I+    + +      S  RIP
Sbjct: 206 PSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIP 265

Query: 168 QLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPELQAPTPAMVNQXXXXXXXXX 347
           QLDGPIPDPY+D LSTPNIYNYQGVVNEDYN+VNTPAP ++QA TPA+  Q         
Sbjct: 266 QLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDD 325

Query: 348 XXXXXXXXXXXXXXXXQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFN 527
                           QGEELNTQHLVLAQFDKVTR KS+W+CTLKDGIMHINNKD+LFN
Sbjct: 326 EPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFN 385

Query: 528 KATGEFDF 551
           KA GEFDF
Sbjct: 386 KANGEFDF 393


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
           gi|223540360|gb|EEF41931.1| protein with unknown
           function [Ricinus communis]
          Length = 383

 Score =  209 bits (533), Expect = 6e-52
 Identities = 110/183 (60%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
 Frame = +3

Query: 6   SQYRPGGYIPQQDGAADVIADKFEVGQMSNSQPGIIIADYEKPVLGLKLSSRIPQLDGPI 185
           +QY  GG+IPQQDGA D     FEV Q+      +I AD E      +   +IPQLDGPI
Sbjct: 206 AQYNNGGFIPQQDGAGDT---PFEVLQVERDT--VISADIEILSSVTRRGLKIPQLDGPI 260

Query: 186 PDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPELQAPTPAMVNQXXXXXXXXXXXXXXX 365
           PDPYDD LSTPNIYNYQGV NEDYN+ NTPAP +LQA TPA++ Q               
Sbjct: 261 PDPYDDVLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNED 320

Query: 366 XXXXXXXXXX-QGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNKATGE 542
                      QGE++NTQHLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LFNKATGE
Sbjct: 321 DDDDDDLDDVDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 380

Query: 543 FDF 551
           FDF
Sbjct: 381 FDF 383


>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Cucumis sativus] gi|449496658|ref|XP_004160191.1|
           PREDICTED: transcription initiation factor IIA large
           subunit-like [Cucumis sativus]
          Length = 402

 Score =  203 bits (517), Expect = 4e-50
 Identities = 108/189 (57%), Positives = 124/189 (65%), Gaps = 7/189 (3%)
 Frame = +3

Query: 6   SQYRPGGYIPQQDGAADVIADKFEVG----QMSNSQPGIIIADYEKPVLGLKLSS-RIPQ 170
           SQY+  G+IPQQDGA D     FE+       S+ +PG I +        ++ S  +IPQ
Sbjct: 214 SQYQANGFIPQQDGAGDAANSVFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQ 273

Query: 171 LDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPELQAPTPAMVNQXXXXXXXXXX 350
           LDGP+PDPYDD LSTPNIYNYQGV NEDYN+ NTPAP +  A TPA+V Q          
Sbjct: 274 LDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDS 333

Query: 351 XXXXXXXXXXXXXXX--QGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLF 524
                            QGEEL+TQHLVLAQFDKVTR KSRW+CTLKDGIMHINNKD+LF
Sbjct: 334 EPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 393

Query: 525 NKATGEFDF 551
           NKATGEFDF
Sbjct: 394 NKATGEFDF 402


>ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|222845598|gb|EEE83145.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  199 bits (506), Expect = 8e-49
 Identities = 105/184 (57%), Positives = 123/184 (66%), Gaps = 3/184 (1%)
 Frame = +3

Query: 9   QYRPGGYIPQQDGAADVIADKFEVGQMSNSQPGIIIADYEKPVLGLKLSS--RIPQLDGP 182
           +Y  GG+IPQQDGA D  +   EV Q+        I    + +L     S  +IPQ+DGP
Sbjct: 233 KYNNGGFIPQQDGAVDSAS---EVSQVECDT----ITTKNREILARVSRSYVKIPQVDGP 285

Query: 183 IPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPELQAPTPAMVNQXXXXXXXXXXXXXX 362
           IPDPYDD LSTPNIYNYQGV NEDYN+ NTPAP +LQA TPA+V+Q              
Sbjct: 286 IPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNE 345

Query: 363 XXXXXXXXXXX-QGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNKATG 539
                       QGEELNTQHL+LAQFDKVTR KSRW+CTLKDG+MHINN+D+LFNKATG
Sbjct: 346 DDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATG 405

Query: 540 EFDF 551
           EF+F
Sbjct: 406 EFEF 409


>ref|XP_003597404.1| Transcription factor/ transcription initiation factor [Medicago
           truncatula] gi|355486452|gb|AES67655.1| Transcription
           factor/ transcription initiation factor [Medicago
           truncatula] gi|388523053|gb|AFK49588.1| unknown
           [Medicago truncatula]
          Length = 388

 Score =  196 bits (497), Expect = 8e-48
 Identities = 109/192 (56%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
 Frame = +3

Query: 3   PSQYRPGGYIPQQDGAADVIADKFEV----GQMS-NSQ----PGIIIADYEKPVLGLKLS 155
           P  Y  GGYIPQQDGA D ++  FE+    G +S NSQ     G + AD E+      L+
Sbjct: 204 PPPYDAGGYIPQQDGAGDAVSGDFEIEVCGGSISFNSQHTNSKGKMPADLER------LA 257

Query: 156 SRIPQLDGPIPDPYDDALSTPNIYNYQGVVNEDYNVVNTPAPPELQAPTPAMVNQXXXXX 335
           SRIPQLDGPIP   DD LSTPNIYNY GV NEDYN+ NTPAPPE+ A TPA+V Q     
Sbjct: 258 SRIPQLDGPIPYE-DDVLSTPNIYNYGGVFNEDYNIANTPAPPEVPASTPALVAQNEAVN 316

Query: 336 XXXXXXXXXXXXXXXXXXXXQGEELNTQHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKD 515
                               Q ++ +T HLVLAQFDKVTR KSRW+CTLKDGIMHIN KD
Sbjct: 317 EDEDDEPLNEDDDDDLDDLDQEDDQDTNHLVLAQFDKVTRTKSRWKCTLKDGIMHINKKD 376

Query: 516 VLFNKATGEFDF 551
           +LFNKATGEFDF
Sbjct: 377 ILFNKATGEFDF 388


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