BLASTX nr result

ID: Atractylodes21_contig00009810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009810
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631646.1| PREDICTED: uncharacterized protein LOC100853...   333   2e-89
ref|XP_004162746.1| PREDICTED: uncharacterized LOC101203623 [Cuc...   312   5e-83
ref|XP_004137132.1| PREDICTED: uncharacterized protein LOC101203...   312   5e-83
ref|XP_002305414.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79
ref|NP_188517.1| Mitochondrial transcription termination factor ...   296   4e-78

>ref|XP_003631646.1| PREDICTED: uncharacterized protein LOC100853221 [Vitis vinifera]
           gi|297741449|emb|CBI32580.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  333 bits (855), Expect = 2e-89
 Identities = 168/263 (63%), Positives = 204/263 (77%), Gaps = 5/263 (1%)
 Frame = +1

Query: 19  SSSYRPPLPHRNGRLHFRTSHRKNLRYLKSLGIIQPAT-----PTPHTLSHILSTLHYFK 183
           SSS  PP       L FRTSHR+NLRYLK+LGII P+T     P+P  +  +LST+++ K
Sbjct: 22  SSSEHPPY-----LLRFRTSHRENLRYLKTLGIIDPSTKPHKFPSPEAVDQVLSTVNFLK 76

Query: 184 SKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLTLNLAASPEESRGLILKCPHILQS 363
           SKGFSEPDFPR++FLCP LF+   DP  IEPVFDFLTL+LAAS +ES  LIL+CP IL S
Sbjct: 77  SKGFSEPDFPRLSFLCPKLFSSDSDPTDIEPVFDFLTLDLAASDQESCSLILRCPQILLS 136

Query: 364 DPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRRVC 543
           D E CL+PTL YL+ LG+++L  PT+LNAHLL+TRV++L  K+RFLR VG S EES R C
Sbjct: 137 DVEYCLRPTLLYLRKLGVEKLNVPTSLNAHLLNTRVERLVAKIRFLRSVGLSYEESARAC 196

Query: 544 GRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQRN 723
           GRFPA+FGY IE+NLKPKF YL REMKR+  EE+  FPQYF FSLENRI PRHLHL+QRN
Sbjct: 197 GRFPAVFGYSIENNLKPKFNYLVREMKRS-VEELKVFPQYFAFSLENRIMPRHLHLEQRN 255

Query: 724 VDAQVPLNRMMLWSDERFFKKWK 792
           V  ++ L RM+LWSD++F+ KWK
Sbjct: 256 V--RISLKRMLLWSDQKFYAKWK 276


>ref|XP_004162746.1| PREDICTED: uncharacterized LOC101203623 [Cucumis sativus]
          Length = 282

 Score =  312 bits (800), Expect = 5e-83
 Identities = 155/265 (58%), Positives = 198/265 (74%), Gaps = 2/265 (0%)
 Frame = +1

Query: 4   TPTLCSSSYRPPLPHRNGRLHFRTSHRKNLRYLKSLGIIQPATP--TPHTLSHILSTLHY 177
           TPT  + S  P L   +  ++FRTSH +N+RYLKSL +I P T   +P  +  IL+T+H+
Sbjct: 23  TPTPTTRSRHPHLHPPS--INFRTSHHQNIRYLKSLNVIDPQTRFHSPDAVHQILTTVHF 80

Query: 178 FKSKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLTLNLAASPEESRGLILKCPHIL 357
            KSKGFS+ DFPR+AFLCP+LFT  FD   I PVF FL  +++AS +ESRGLIL+CP IL
Sbjct: 81  LKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLATDISASLQESRGLILRCPKIL 140

Query: 358 QSDPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRR 537
            SD ELCLKPT  +LK LGI+ LKSP+ LN+HLL+TRV+KL  K+RF + +GFS EE+ +
Sbjct: 141 FSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIRFFQEIGFSHEEASK 200

Query: 538 VCGRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQ 717
           VCGR PA+FGY ++ NLKPK+EY  +EM+R+  EE+  FPQYFGFSLE RI PRHLHLKQ
Sbjct: 201 VCGRMPAMFGYSVKENLKPKYEYFVKEMERD-LEELKGFPQYFGFSLEGRIMPRHLHLKQ 259

Query: 718 RNVDAQVPLNRMMLWSDERFFKKWK 792
           R +   +PLN M+LWS  RF+ KWK
Sbjct: 260 RGL--HIPLNSMLLWSHNRFYSKWK 282


>ref|XP_004137132.1| PREDICTED: uncharacterized protein LOC101203623 [Cucumis sativus]
          Length = 308

 Score =  312 bits (800), Expect = 5e-83
 Identities = 155/265 (58%), Positives = 198/265 (74%), Gaps = 2/265 (0%)
 Frame = +1

Query: 4   TPTLCSSSYRPPLPHRNGRLHFRTSHRKNLRYLKSLGIIQPATP--TPHTLSHILSTLHY 177
           TPT  + S  P L   +  ++FRTSH +N+RYLKSL +I P T   +P  +  IL+T+H+
Sbjct: 49  TPTPTTRSRHPHLHPPS--INFRTSHHQNIRYLKSLNVIDPQTRFHSPDAVHQILTTVHF 106

Query: 178 FKSKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLTLNLAASPEESRGLILKCPHIL 357
            KSKGFS+ DFPR+AFLCP+LFT  FD   I PVF FL  +++AS +ESRGLIL+CP IL
Sbjct: 107 LKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLATDISASLQESRGLILRCPKIL 166

Query: 358 QSDPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRR 537
            SD ELCLKPT  +LK LGI+ LKSP+ LN+HLL+TRV+KL  K+RF + +GFS EE+ +
Sbjct: 167 FSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIRFFQEIGFSHEEASK 226

Query: 538 VCGRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQ 717
           VCGR PA+FGY ++ NLKPK+EY  +EM+R+  EE+  FPQYFGFSLE RI PRHLHLKQ
Sbjct: 227 VCGRMPAMFGYSVKENLKPKYEYFVKEMERD-LEELKGFPQYFGFSLEGRIMPRHLHLKQ 285

Query: 718 RNVDAQVPLNRMMLWSDERFFKKWK 792
           R +   +PLN M+LWS  RF+ KWK
Sbjct: 286 RGL--HIPLNSMLLWSHNRFYSKWK 308


>ref|XP_002305414.1| predicted protein [Populus trichocarpa] gi|222848378|gb|EEE85925.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  300 bits (767), Expect = 3e-79
 Identities = 146/257 (56%), Positives = 191/257 (74%), Gaps = 5/257 (1%)
 Frame = +1

Query: 37  PLPHRNGRLHFRTSHRKNLRYLKSLGIIQPAT-----PTPHTLSHILSTLHYFKSKGFSE 201
           P PH +  + FRT+H +NLRYLK++G+I P +     PTP  +SHIL+TL +F+SKGF E
Sbjct: 27  PSPHPSHYIKFRTAHHENLRYLKAIGVIGPNSKSRQFPTPDAISHILATLKFFESKGFLE 86

Query: 202 PDFPRIAFLCPHLFTPTFDPITIEPVFDFLTLNLAASPEESRGLILKCPHILQSDPELCL 381
            DF R+ FLCP L +  FD   IEPVF FLT +L AS +ESRGL++KCP +L SD E  L
Sbjct: 87  TDFARLTFLCPELLSLNFDITDIEPVFQFLTDDLHASVQESRGLVIKCPRLLFSDVEYFL 146

Query: 382 KPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRRVCGRFPAI 561
           +PTL YL+ LG+ +L  P+ LNAHLL+ RV+K++ +  FLR +GFS +E+  +CGR PAI
Sbjct: 147 RPTLNYLRQLGVNKLNVPSNLNAHLLNIRVEKMQVRFEFLRSIGFSHDEAANICGRLPAI 206

Query: 562 FGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQRNVDAQVP 741
           FGY IE+NL+PK EYL  EMKR+  +E+ +FPQYF FSLE +I PRHLHLK+RNV  ++ 
Sbjct: 207 FGYSIENNLRPKVEYLVDEMKRS-LDELKEFPQYFAFSLEKKIMPRHLHLKRRNV--KIK 263

Query: 742 LNRMMLWSDERFFKKWK 792
           LNRM+LWSD RF+ KWK
Sbjct: 264 LNRMLLWSDGRFYGKWK 280


>ref|NP_188517.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|9294696|dbj|BAB03096.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|117958999|gb|ABK59696.1| At3g18870 [Arabidopsis
           thaliana] gi|332642641|gb|AEE76162.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 274

 Score =  296 bits (758), Expect = 4e-78
 Identities = 149/263 (56%), Positives = 191/263 (72%), Gaps = 5/263 (1%)
 Frame = +1

Query: 19  SSSYRPPLPHRNGRLH--FRTSHRKNLRYLKSLGIIQP---ATPTPHTLSHILSTLHYFK 183
           SS   PP P  +  L+  F+TSHR+NLR+L SLGI+       P  + LS ILS ++  K
Sbjct: 14  SSFSSPPSPSSSKPLYLKFQTSHRENLRHLSSLGIVPQNPRLAPPANDLSVILSAVNLLK 73

Query: 184 SKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLTLNLAASPEESRGLILKCPHILQS 363
           SKG S+ DFPR+ FLCP LF+PTFD   ++PVFDFLT  L AS EESRGLI+ CP+IL S
Sbjct: 74  SKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILFS 133

Query: 364 DPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRRVC 543
           D E CL+PTL YLK LG++ L   +  NAH+L+TRV+KL  KMRFL+ +GF  EE+ RVC
Sbjct: 134 DVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHEEAARVC 193

Query: 544 GRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQRN 723
           GR PAIFGY +E NL+PKFE+L  +M+R   EE+ KFPQYF FSL  RI+PRH HLK++N
Sbjct: 194 GRIPAIFGYSVEDNLRPKFEFLVYDMERE-LEELKKFPQYFAFSLGKRIRPRHWHLKKKN 252

Query: 724 VDAQVPLNRMMLWSDERFFKKWK 792
           V  +V L+RM++W D++F+ KWK
Sbjct: 253 V--RVSLSRMLMWGDQKFYSKWK 273


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