BLASTX nr result

ID: Atractylodes21_contig00009801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009801
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305219.1| predicted protein [Populus trichocarpa] gi|1...    82   3e-13
ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [C...    82   5e-13
ref|XP_004137862.1| PREDICTED: 60S ribosomal protein L24-like [C...    82   5e-13
ref|XP_002279048.2| PREDICTED: 60S ribosomal protein L24 [Vitis ...    81   6e-13
ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    81   6e-13

>ref|XP_002305219.1| predicted protein [Populus trichocarpa] gi|118487980|gb|ABK95811.1|
            unknown [Populus trichocarpa] gi|222848183|gb|EEE85730.1|
            predicted protein [Populus trichocarpa]
          Length = 163

 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +2

Query: 1319 SYVFLFANSKCKRYFHNKLKPSKLTWTAMFRKQHKKDIA 1435
            S VFLFANSKCKRYFHNKLKPSKLTWTAM+RKQHKKDIA
Sbjct: 28   SQVFLFANSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIA 66


>ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
            gi|449523211|ref|XP_004168617.1| PREDICTED: 60S ribosomal
            protein L24-like [Cucumis sativus]
          Length = 164

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +2

Query: 1298 IKDLCVSSYVFLFANSKCKRYFHNKLKPSKLTWTAMFRKQHKKDIA 1435
            I+ +   S VFLFANSKCKRYFHN+LKPSKLTWTAM+RKQHKKDIA
Sbjct: 21   IRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA 66


>ref|XP_004137862.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
            gi|449501000|ref|XP_004161250.1| PREDICTED: 60S ribosomal
            protein L24-like [Cucumis sativus]
          Length = 164

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +2

Query: 1298 IKDLCVSSYVFLFANSKCKRYFHNKLKPSKLTWTAMFRKQHKKDIA 1435
            I+ +   S VFLFANSKCKRYFHN+LKPSKLTWTAM+RKQHKKDIA
Sbjct: 21   IRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA 66


>ref|XP_002279048.2| PREDICTED: 60S ribosomal protein L24 [Vitis vinifera]
          Length = 163

 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +2

Query: 1319 SYVFLFANSKCKRYFHNKLKPSKLTWTAMFRKQHKKDIA 1435
            S VFLFANSKCKRYFHN+LKPSKLTWTAM+RKQHKKDIA
Sbjct: 28   SQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA 66


>ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L24 [Vitis
            vinifera]
          Length = 198

 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +2

Query: 1319 SYVFLFANSKCKRYFHNKLKPSKLTWTAMFRKQHKKDIA 1435
            S VFLFANSKCKRYFHN+LKPSKLTWTAM+RKQHKKDIA
Sbjct: 61   SQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA 99


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