BLASTX nr result

ID: Atractylodes21_contig00009790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009790
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-lik...    69   3e-10
ref|XP_003555216.1| PREDICTED: pre-mRNA-splicing factor syf2-lik...    64   1e-08
ref|NP_001241898.1| uncharacterized protein LOC100787714 [Glycin...    64   1e-08
gb|AFK34816.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ric...    58   7e-07

>ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Cucumis sativus]
           gi|449489629|ref|XP_004158369.1| PREDICTED:
           pre-mRNA-splicing factor syf2-like [Cucumis sativus]
          Length = 310

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = -3

Query: 118 EGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNEP 2
           EGR VHPDCRN+SNPYHECSEYCFKVIAE    + KNEP
Sbjct: 4   EGR-VHPDCRNASNPYHECSEYCFKVIAELKARSQKNEP 41


>ref|XP_003555216.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Glycine max]
          Length = 411

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = -3

Query: 124 MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNE 5
           M++ R VHPDCRN+SNPYHECS+YCF+VIAEA K+ S+ +
Sbjct: 99  MSDERAVHPDCRNASNPYHECSDYCFRVIAEA-KIRSQQQ 137


>ref|NP_001241898.1| uncharacterized protein LOC100787714 [Glycine max]
           gi|255636854|gb|ACU18760.1| unknown [Glycine max]
          Length = 314

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = -3

Query: 124 MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNE 5
           M++ R VHPDCRN+SNPYHECS+YCF+VIAEA K+ S+ +
Sbjct: 1   MSDERAVHPDCRNASNPYHECSDYCFRVIAEA-KIRSQQQ 39


>gb|AFK34816.1| unknown [Lotus japonicus]
          Length = 211

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -3

Query: 124 MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEA 29
           M++ R VHPDCRN+ NP+HECS+YCF+VIA A
Sbjct: 1   MSDERAVHPDCRNAGNPFHECSDYCFRVIAVA 32


>ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ricinus communis]
           gi|223539559|gb|EEF41147.1| Pre-mRNA-splicing factor
           syf2, putative [Ricinus communis]
          Length = 308

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = -3

Query: 124 MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNE 5
           M E R VHPDC N+SNPYHEC EYCF+ IAEA     K E
Sbjct: 1   MAEERRVHPDCINASNPYHECVEYCFRKIAEAKVRTGKLE 40


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