BLASTX nr result

ID: Atractylodes21_contig00009738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009738
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16383.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   223   2e-56
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   218   5e-55
ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   213   2e-53

>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  223 bits (567), Expect = 2e-56
 Identities = 104/144 (72%), Positives = 121/144 (84%)
 Frame = +3

Query: 3   YVVAKDVKNNVVFVSRNYYSVDKRRRSFRVGSFRWISGSPPRNFDQLRCKVRHGPDFYNC 182
           YVV KDVKNNVVFVSRNY+S+DKRRR FRVGS +WIS  PP   +QL+CKVRHGP FYNC
Sbjct: 344 YVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNC 403

Query: 183 TLHMEVAENGIDNIGIVQLPEDDQGLAAGQFAAFYEEQVCVGSGVILESWDDKGFPVCDK 362
           +  ME  E+G +++ +VQL EDDQGLAAGQF AFY+ + C+GSGVILESWDD+GFPVC K
Sbjct: 404 SFTMEPGEDGHEDVAVVQLSEDDQGLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAK 463

Query: 363 ARDIAKMEDKSKLGKPVKSKPRPE 434
           A +IA+MEDKSKLGKPVK K RPE
Sbjct: 464 ALEIARMEDKSKLGKPVKIKVRPE 487


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  223 bits (567), Expect = 2e-56
 Identities = 104/144 (72%), Positives = 121/144 (84%)
 Frame = +3

Query: 3   YVVAKDVKNNVVFVSRNYYSVDKRRRSFRVGSFRWISGSPPRNFDQLRCKVRHGPDFYNC 182
           YVV KDVKNNVVFVSRNY+S+DKRRR FRVGS +WIS  PP   +QL+CKVRHGP FYNC
Sbjct: 340 YVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNC 399

Query: 183 TLHMEVAENGIDNIGIVQLPEDDQGLAAGQFAAFYEEQVCVGSGVILESWDDKGFPVCDK 362
           +  ME  E+G +++ +VQL EDDQGLAAGQF AFY+ + C+GSGVILESWDD+GFPVC K
Sbjct: 400 SFTMEPGEDGHEDVAVVQLSEDDQGLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAK 459

Query: 363 ARDIAKMEDKSKLGKPVKSKPRPE 434
           A +IA+MEDKSKLGKPVK K RPE
Sbjct: 460 ALEIARMEDKSKLGKPVKIKVRPE 483


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  218 bits (555), Expect = 5e-55
 Identities = 100/144 (69%), Positives = 121/144 (84%)
 Frame = +3

Query: 3   YVVAKDVKNNVVFVSRNYYSVDKRRRSFRVGSFRWISGSPPRNFDQLRCKVRHGPDFYNC 182
           YVV KD+KNNVVFVSRNY+S DKRRR FRVGS +W+SG PP  F +L+CKVRHGP FY+C
Sbjct: 338 YVVEKDIKNNVVFVSRNYFSFDKRRRVFRVGSLKWLSGFPPDQFTELQCKVRHGPSFYSC 397

Query: 183 TLHMEVAENGIDNIGIVQLPEDDQGLAAGQFAAFYEEQVCVGSGVILESWDDKGFPVCDK 362
            L ME +E+G +++ +V L EDDQGLAAGQFAAFY+ + C+GSGVILESWDD+GFPVC K
Sbjct: 398 NLTMEHSEDGHEDVAVVHLSEDDQGLAAGQFAAFYKGRSCIGSGVILESWDDQGFPVCQK 457

Query: 363 ARDIAKMEDKSKLGKPVKSKPRPE 434
           A + A+MEDKSKLGKP+K K +PE
Sbjct: 458 AIENAQMEDKSKLGKPIKIKVKPE 481


>ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|222845662|gb|EEE83209.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  214 bits (544), Expect = 1e-53
 Identities = 99/144 (68%), Positives = 120/144 (83%)
 Frame = +3

Query: 3   YVVAKDVKNNVVFVSRNYYSVDKRRRSFRVGSFRWISGSPPRNFDQLRCKVRHGPDFYNC 182
           YVV KDVKNNVVFVSRNY+S+DKRRRSFRVGS +W+SGSP     QL+CKVRHGP FY+C
Sbjct: 264 YVVEKDVKNNVVFVSRNYFSLDKRRRSFRVGSLKWLSGSPTDMTTQLQCKVRHGPTFYDC 323

Query: 183 TLHMEVAENGIDNIGIVQLPEDDQGLAAGQFAAFYEEQVCVGSGVILESWDDKGFPVCDK 362
           ++ +E+ E+  + +  V L EDDQGLAAGQF AFY+ + C+GSGVILESWDDKGFPVC K
Sbjct: 324 SVKIELGEDSPEEVVAVHLCEDDQGLAAGQFTAFYQGRTCIGSGVILESWDDKGFPVCQK 383

Query: 363 ARDIAKMEDKSKLGKPVKSKPRPE 434
           A ++A++EDKSKLGKPVK K +PE
Sbjct: 384 ALELARLEDKSKLGKPVKIKVKPE 407


>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  213 bits (541), Expect = 2e-53
 Identities = 99/145 (68%), Positives = 119/145 (82%)
 Frame = +3

Query: 3   YVVAKDVKNNVVFVSRNYYSVDKRRRSFRVGSFRWISGSPPRNFDQLRCKVRHGPDFYNC 182
           YVV KDVKNNVVFVSRNY+S DKRRR FRVGSF+W+SG PP    QL+CKVRHGP FY+C
Sbjct: 318 YVVEKDVKNNVVFVSRNYFSFDKRRRVFRVGSFKWLSGLPPGQTTQLQCKVRHGPGFYDC 377

Query: 183 TLHMEVAENGIDNIGIVQLPEDDQGLAAGQFAAFYEEQVCVGSGVILESWDDKGFPVCDK 362
           +L MEV  +G  +  +V++ EDDQGLAAGQFAAFYE + C+GSGVILE WDD+ FPVC K
Sbjct: 378 SLQMEVEADGQCHSAVVRISEDDQGLAAGQFAAFYEGRTCIGSGVILEFWDDQSFPVCTK 437

Query: 363 ARDIAKMEDKSKLGKPVKSKPRPED 437
           A +IA+MEDKSK+G PVK K +P++
Sbjct: 438 ALEIARMEDKSKIGNPVKIKVKPDN 462


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