BLASTX nr result

ID: Atractylodes21_contig00009708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009708
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea ma...   113   2e-23
ref|XP_003554010.1| PREDICTED: putative H/ACA ribonucleoprotein ...   111   7e-23
ref|XP_003548749.1| PREDICTED: putative H/ACA ribonucleoprotein ...   111   7e-23
ref|XP_002319696.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group] g...   110   9e-23

>ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea mays]
           gi|194694218|gb|ACF81193.1| unknown [Zea mays]
          Length = 191

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/121 (52%), Positives = 69/121 (57%)
 Frame = -1

Query: 407 NDGPPEEVVEVASFVHACEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
           ++GPP EVVEV++FVHACEGD                                       
Sbjct: 41  DEGPPAEVVEVSTFVHACEGDAVTKLTNEKVPYFNAPIYLQNKTQVGK------------ 88

Query: 227 XXXXXXXXVDEIFGPINESFFSVKMMEGIVATSYSAGDKFYIDPMKLLPLSRFLTQPKGA 48
                   VDEIFGPINES+FSVKMMEGI+ATSY  GDKFYIDPMKLLPLSRFL QPKG 
Sbjct: 89  --------VDEIFGPINESYFSVKMMEGIIATSYKEGDKFYIDPMKLLPLSRFLPQPKGQ 140

Query: 47  S 45
           S
Sbjct: 141 S 141


>ref|XP_003554010.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Glycine max]
          Length = 204

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/121 (50%), Positives = 70/121 (57%)
 Frame = -1

Query: 407 NDGPPEEVVEVASFVHACEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
           ++GPP EVVEV+SF+HACEGD                                       
Sbjct: 57  DEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGK------------ 104

Query: 227 XXXXXXXXVDEIFGPINESFFSVKMMEGIVATSYSAGDKFYIDPMKLLPLSRFLTQPKGA 48
                   VDEIFGPINE++FS+KMMEGIVATSYS+GDKFYIDP KLLPL+RFL QPKG 
Sbjct: 105 --------VDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQ 156

Query: 47  S 45
           S
Sbjct: 157 S 157


>ref|XP_003548749.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Glycine max]
          Length = 195

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/121 (50%), Positives = 70/121 (57%)
 Frame = -1

Query: 407 NDGPPEEVVEVASFVHACEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
           ++GPP EVVEV+SF+HACEGD                                       
Sbjct: 44  DEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGK------------ 91

Query: 227 XXXXXXXXVDEIFGPINESFFSVKMMEGIVATSYSAGDKFYIDPMKLLPLSRFLTQPKGA 48
                   VDEIFGPINE++FS+KMMEGIVATSYS+GDKFYIDP KLLPL+RFL QPKG 
Sbjct: 92  --------VDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQ 143

Query: 47  S 45
           S
Sbjct: 144 S 144


>ref|XP_002319696.1| predicted protein [Populus trichocarpa] gi|222858072|gb|EEE95619.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/119 (50%), Positives = 69/119 (57%)
 Frame = -1

Query: 407 NDGPPEEVVEVASFVHACEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
           ++GPP EV+EV+SF+HACEGD                                       
Sbjct: 54  DEGPPSEVIEVSSFLHACEGDAVTKLTNEKIPYFNAPIFLQNKTQIGK------------ 101

Query: 227 XXXXXXXXVDEIFGPINESFFSVKMMEGIVATSYSAGDKFYIDPMKLLPLSRFLTQPKG 51
                   VDEIFGPINES+FS+KMMEGIVATSY+ GDKFYIDP KLLPL+RFLTQPKG
Sbjct: 102 --------VDEIFGPINESYFSIKMMEGIVATSYAPGDKFYIDPSKLLPLARFLTQPKG 152


>ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group]
           gi|77551701|gb|ABA94498.1| H/ACA ribonucleoprotein
           complex subunit 1-like protein 1, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113645372|dbj|BAF28513.1| Os11g0579800 [Oryza sativa
           Japonica Group] gi|125577612|gb|EAZ18834.1| hypothetical
           protein OsJ_34372 [Oryza sativa Japonica Group]
           gi|215768512|dbj|BAH00741.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 196

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/121 (50%), Positives = 69/121 (57%)
 Frame = -1

Query: 407 NDGPPEEVVEVASFVHACEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
           ++GPP EVVEV++F+HACEGD                                       
Sbjct: 46  DEGPPAEVVEVSTFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGK------------ 93

Query: 227 XXXXXXXXVDEIFGPINESFFSVKMMEGIVATSYSAGDKFYIDPMKLLPLSRFLTQPKGA 48
                   VDEIFGPINES FS+KM+EGI+ATSYS GDKFYIDPMKLLPLSRFL QPKG 
Sbjct: 94  --------VDEIFGPINESLFSIKMLEGIIATSYSEGDKFYIDPMKLLPLSRFLPQPKGQ 145

Query: 47  S 45
           S
Sbjct: 146 S 146


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