BLASTX nr result

ID: Atractylodes21_contig00009684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009684
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340...    85   7e-15
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]      84   9e-15
ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycin...    84   2e-14
ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|7...    83   3e-14
emb|CAA71589.1| g5bf [Arabidopsis thaliana]                            83   3e-14

>ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
           [Glycine max]
          Length = 378

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +1

Query: 199 FCGTKFNTSIQYKRKVCQPKGALNVMASSAKKILVMGGTRFIGIFLSRLLVEEGH 363
           F GT+  T +Q+KRK+C PKG+  V ASS KKIL+MGGTRFIG+FLSRLLV+EGH
Sbjct: 24  FSGTRLQTQLQFKRKLCHPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGH 78


>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +1

Query: 199 FCGTKFNTSIQYKRKVCQPKGALNVMASSAKKILVMGGTRFIGIFLSRLLVEEGH 363
           F G K +  +QYKRKV QPKGAL V ASS KKIL+MGGTRFIG+FLSRLLV+EGH
Sbjct: 24  FNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGH 78


>ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max]
           gi|255647108|gb|ACU24022.1| unknown [Glycine max]
          Length = 378

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = +1

Query: 199 FCGTKFNTSIQYKRKVCQPKGALNVMASSAKKILVMGGTRFIGIFLSRLLVEEGH 363
           F GT+  T +Q+KRK C PKG+  V ASS KKIL+MGGTRFIG+FLSRLLV+EGH
Sbjct: 24  FSGTRLQTQLQFKRKQCHPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGH 78


>ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
           gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
           Full=Chloroplast stem-loop binding protein of 41 kDa b,
           chloroplastic; Short=CSP41-b; AltName:
           Full=Heteroglycan-interacting protein 1.3; AltName:
           Full=Protein CHLOROPLAST RNA BINDING; AltName:
           Full=Protein Gb5f; Flags: Precursor
           gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
           [Arabidopsis thaliana]
           gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
           [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
           Identical to gb|Y10557 g5bf gene from Arabidopsis
           thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
           gb|T22425, gb|N64934 and gb|T46767 come from this gene
           [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|17979099|gb|AAL47493.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA
           binding protein [Arabidopsis thaliana]
          Length = 378

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +1

Query: 199 FCGTKFNTSIQYKRKVCQPKGALNVMASSAKKILVMGGTRFIGIFLSRLLVEEGH 363
           F G K +  +QYKRKV QPKGAL V ASS KKIL+MGGTRFIG+FLSR+LV+EGH
Sbjct: 24  FNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGH 78


>emb|CAA71589.1| g5bf [Arabidopsis thaliana]
          Length = 378

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +1

Query: 199 FCGTKFNTSIQYKRKVCQPKGALNVMASSAKKILVMGGTRFIGIFLSRLLVEEGH 363
           F G K +  +QYKRKV QPKGAL V ASS KKIL+MGGTRFIG+FLSR+LV+EGH
Sbjct: 24  FNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGH 78


Top