BLASTX nr result

ID: Atractylodes21_contig00009647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009647
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ72578.1| resistance protein RGC2 [Lactuca sativa]                57   1e-06
gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]      57   2e-06
gb|AAQ72575.1| resistance protein RGC2 [Lactuca sativa]                55   6e-06
gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]     55   8e-06

>gb|AAQ72578.1| resistance protein RGC2 [Lactuca sativa]
          Length = 1285

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = +2

Query: 74   RKLATTRNNQXXXXXXXXXXXXXDSMESITHVWEYNWNKLL-MSRQESESSFLNLTSITL 250
            R+L TT +NQ               M +++HVW+ NWNK + + +++SES F NLT+I +
Sbjct: 1125 RELVTTHHNQEIVLPYLEDLYIR-YMNNMSHVWKCNWNKFVTLPKEQSESPFYNLTTIYM 1183

Query: 251  YTCKRIKYL 277
            Y C+RIKYL
Sbjct: 1184 YGCRRIKYL 1192


>gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]
          Length = 1923

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2    HLRTLWLCGYKGXXXXXXXXXXXXRKLATTRNNQXXXXXXXXXXXXXD-SMESITHVWEY 178
            +LR L L  Y+G            R+L TT +NQ                M++++HVW+ 
Sbjct: 1106 NLRMLELRRYEGVEVVFEIESPTSRELVTTHHNQQQPIILPNLQELVLWEMDNMSHVWKC 1165

Query: 179  -NWNKLL-MSRQESESSFLNLTSITLYTCKRIKYL 277
             NWNK   + +Q+SES F NLT+I +Y CK IKYL
Sbjct: 1166 KNWNKFFTLPKQQSESPFHNLTTINIYRCKTIKYL 1200


>gb|AAQ72575.1| resistance protein RGC2 [Lactuca sativa]
          Length = 753

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = +2

Query: 74  RKLATTRNNQXXXXXXXXXXXXX-DSMESITHVWEY-NWNKLL-MSRQESESSFLNLTSI 244
           R+L TT NNQ               +M++ +HVW+  NWNK   + +Q+SES F NLT+I
Sbjct: 58  RELVTTHNNQQQPIILPYLQELVLRNMDNTSHVWKCSNWNKFFTLPKQQSESPFHNLTTI 117

Query: 245 TLYTCKRIKYL 277
            +Y CK IKYL
Sbjct: 118 NIYRCKTIKYL 128


>gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]
          Length = 1810

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2    HLRTLWLCGYKGXXXXXXXXXXXX--RKLATTRNNQXXXXXXXXXXXXX-DSMESITHVW 172
            +LR L L  Y+G              R+L TTRNNQ               +M++ +HVW
Sbjct: 1090 NLRVLTLDNYEGVEVVFEIESESPTCRELVTTRNNQQQPIILPYLQDLYLRNMDNTSHVW 1149

Query: 173  EY-NWNKLL-MSRQESESSFLNLTSITLYTCKRIKYL 277
            +  NWNK   + +Q+SES F NLT+I +  CK IKYL
Sbjct: 1150 KCSNWNKFFTLPKQQSESPFHNLTTINILKCKSIKYL 1186


Top