BLASTX nr result

ID: Atractylodes21_contig00009518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009518
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...   189   1e-45
emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]           181   5e-43
ref|XP_002311164.1| f-box family protein [Populus trichocarpa] g...   171   3e-40
ref|XP_004142752.1| PREDICTED: dof zinc finger protein DOF3.6-li...   162   2e-37
tpg|DAA34007.1| TPA_inf: Dof-type zinc finger protein 4 [Sorghum...   150   7e-34

>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
           gi|222832921|gb|EEE71398.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score =  189 bits (481), Expect = 1e-45
 Identities = 119/287 (41%), Positives = 144/287 (50%), Gaps = 10/287 (3%)
 Frame = +1

Query: 40  IRPGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 219
           IRPGSM DRARLAK+PLPE  L CPRC+STNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG
Sbjct: 55  IRPGSMTDRARLAKIPLPEMALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 114

Query: 220 ALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENMTSTQLPHPPSLHL- 396
           ALRNVPVGGGC                                 ++T      PP L + 
Sbjct: 115 ALRNVPVGGGCRRNKRSKGSGRSKSPVKAGSSSSGGLSSNGGTTDITGNMTTPPPLLPIF 174

Query: 397 PFMSSLGQYGG--VG---GNLSSSIGGFQPQNEMGNFQMXXXXXXXXXXXXXXXXXXXEN 561
           P +  LG Y    +G   G +  S+G          FQM                   E 
Sbjct: 175 PPLHHLGDYNSPDIGLNFGGILPSVGATAGGGGGVEFQMENSTSSNSVGGSVLSSGLVEQ 234

Query: 562 WR---VPFQLPGFEVPNNTTNLFNYQNHDQGVIEAPSVGGDMRLKSTSGFDNSQIDPPVK 732
           WR   V  Q+  +   +N        + + G I   +  G +R +       SQ+   VK
Sbjct: 235 WRLQQVQHQVQQYPFLSNLEPSSGLYSFEGGGIGPSNYAGQIRSRPLDSTGVSQL-ASVK 293

Query: 733 VEDNRGLNLSRQFLGMLESTNQQPWAG-NSWAEFPGVSTSTPTTHFL 870
           +E N+GLNLSR FLG+  S N Q W G N+W + PG  TS+ T+H L
Sbjct: 294 MEGNQGLNLSRNFLGI--SGNDQYWGGNNAWTDLPGF-TSSSTSHLL 337


>emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]
          Length = 324

 Score =  181 bits (458), Expect = 5e-43
 Identities = 116/308 (37%), Positives = 150/308 (48%), Gaps = 31/308 (10%)
 Frame = +1

Query: 40  IRPGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 219
           IRPGSMVDRARLAK+PLPE GL CPRCDSTNTKFCYFNNY+L+QPRHFCKTCRRYWTRGG
Sbjct: 50  IRPGSMVDRARLAKIPLPEAGLKCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 109

Query: 220 ALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENMT----STQL----- 372
           ALR+VPVGGGC                                 + +    ST++     
Sbjct: 110 ALRSVPVGGGCRRNKRSKSNNNNNSSKTAGSNVNTNTIASGTSTSASPSSCSTEIMNGRH 169

Query: 373 ----PHPPSLHLPFMSSLGQYGGVGGNLSSSIGGFQP-----------------QNEMGN 489
                 PP L  P M++         NL+   GGFQP                  +EMG 
Sbjct: 170 HFSHEQPPQL-TPLMAAF-------QNLNHHYGGFQPPPLVSTHHGNGTGALGHHHEMG- 220

Query: 490 FQMXXXXXXXXXXXXXXXXXXXENWRVPFQLPGFEVPNNTTNLFNYQN-HDQGVIEAPSV 666
           FQ+                   + WR+P            TNL+ +Q+  DQG+ E+ SV
Sbjct: 221 FQIGSSTNTNNLPVPPGGGSDHQ-WRLPSLAA-------NTNLYPFQHGTDQGIHESSSV 272

Query: 667 GGDMRLKSTSGFDNSQIDPPVKVEDNRGLNLSRQFLGMLESTNQQPWAGNSWAEFPGVST 846
             +                 +   D++GLN ++QFLG +E+   Q W GN+W  F G+++
Sbjct: 273 NNN----------------NINAHDDQGLNSTKQFLGTMENNTNQYWGGNAWTGFSGLNS 316

Query: 847 STPTTHFL 870
           S+  +H L
Sbjct: 317 SSSASHLL 324


>ref|XP_002311164.1| f-box family protein [Populus trichocarpa]
           gi|222850984|gb|EEE88531.1| f-box family protein
           [Populus trichocarpa]
          Length = 334

 Score =  171 bits (434), Expect = 3e-40
 Identities = 111/285 (38%), Positives = 138/285 (48%), Gaps = 15/285 (5%)
 Frame = +1

Query: 43  RPGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGA 222
           RPGSM DRARLAK+ LPE  L CPRC S NTKFCYFNNYSL+QPRHFCKTCRRYWT GGA
Sbjct: 54  RPGSMTDRARLAKVQLPETALKCPRCQSPNTKFCYFNNYSLSQPRHFCKTCRRYWTSGGA 113

Query: 223 LRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENMTSTQLPHPPSLH-LP 399
           LRNVPVGGGC                                 ++     P PP L  LP
Sbjct: 114 LRNVPVGGGCRRNKRSKGSGRSKFPIKAVSSSSGGLASNCCTADILGHMPPPPPQLPILP 173

Query: 400 FMSSLGQYGGVG-----GNLSSSIGGFQPQNEMGNFQMXXXXXXXXXXXXXXXXXXXENW 564
            +  LG Y         G +  SIG      +   FQ+                   E W
Sbjct: 174 PLHHLGDYNSADIGLDFGGIQHSIGVTAGGGDGVEFQIGSSTSSNGVAGSLLSSGLVEQW 233

Query: 565 RVP------FQLPGFEVPNNTTNLFNYQNHDQGVIEAPSVGGDMRLK--STSGFDNSQID 720
           R+        Q P F      + LF+++    G IE+ +  G +R K   T+G  +    
Sbjct: 234 RLQQVQQQVQQFPFFSNMEPPSGLFSFEG---GGIESSNYAGQIRSKPLDTTGVTHL--- 287

Query: 721 PPVKVEDNRGLNLSRQFLGMLESTNQQPWAG-NSWAEFPGVSTST 852
             VK E+N+ LNLS++ LG+  S   Q W G N+W + PG ++ST
Sbjct: 288 ATVKTEENQRLNLSKKVLGI--SGIDQHWGGNNAWTDLPGFTSST 330


>ref|XP_004142752.1| PREDICTED: dof zinc finger protein DOF3.6-like [Cucumis sativus]
           gi|449483850|ref|XP_004156711.1| PREDICTED: dof zinc
           finger protein DOF3.6-like [Cucumis sativus]
          Length = 361

 Score =  162 bits (410), Expect = 2e-37
 Identities = 115/312 (36%), Positives = 149/312 (47%), Gaps = 35/312 (11%)
 Frame = +1

Query: 40  IRPGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 219
           +RPGSM DRARLAK+P PE GL CPRC+STNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG
Sbjct: 62  VRPGSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 121

Query: 220 ALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---NMTSTQLPH---- 378
           A+RNVPVGGGC                                    ++ S QL H    
Sbjct: 122 AMRNVPVGGGCRRSSKRSSKGGSNNRSKSPGGSSTSTSTVSSNSCTTDIISPQLAHHHHP 181

Query: 379 PPSLHLPFMSSLGQYGGVGGNLSSSIGGFQPQNEMGNFQMXXXXXXXXXXXXXXXXXXXE 558
           PP+ HLPF S    +    GNL  +    Q  N + +                       
Sbjct: 182 PPTTHLPFFSQNLHHLSEFGNLGLNFEALQIPNSLPS------SAESSSVLSSGIISDHH 235

Query: 559 NWRVPF-----QLPGF----------EVPNNTTNLFNYQNHDQGVIEAPSVGGDMRLKST 693
            W++PF     Q  G                T +  NYQ   + ++E+   G + +L++ 
Sbjct: 236 PWKIPFFGNLHQQNGIYSNFIGDQDHHHQQQTADFTNYQRLSKPLLES---GFNHQLENI 292

Query: 694 SGFDNSQIDPPVKV-EDNRGL-NLSRQFLGM-------LESTNQQPWAGN-SWAEFP--- 834
           +  +N+     +K+ ED +G+ NLSR FLG+         ST     AGN  W+  P   
Sbjct: 293 NINNNNN---SMKILEDTQGINNLSRNFLGIQPNEDQFWNSTTTTTTAGNIGWSSDPISD 349

Query: 835 GVSTSTPTTHFL 870
             +T++ TTH L
Sbjct: 350 HFNTTSSTTHLL 361


>tpg|DAA34007.1| TPA_inf: Dof-type zinc finger protein 4 [Sorghum bicolor]
          Length = 358

 Score =  150 bits (379), Expect = 7e-34
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +1

Query: 40  IRPGSMVDRARLAKLPLPEPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 219
           IRPGSM +RARLAK+P PEPGL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG
Sbjct: 27  IRPGSMTERARLAKIPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 86

Query: 220 ALRNVPVGGGC 252
           ALRNVPVGGGC
Sbjct: 87  ALRNVPVGGGC 97


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