BLASTX nr result

ID: Atractylodes21_contig00009509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009509
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]       188   2e-45
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                186   6e-45
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   186   7e-45
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   186   1e-44
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   182   1e-43

>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
          Length = 438

 Score =  188 bits (478), Expect = 2e-45
 Identities = 92/227 (40%), Positives = 126/227 (55%), Gaps = 2/227 (0%)
 Frame = +3

Query: 312 YLGVPLLSKNLNARDCKPLIDKVRSRILNWKTKCLSFAGRLQLIQSVLNSIPVYWAGVFV 491
           YLG+PL+S+ L   + +PL+ K+++++  W  K LSFAGRLQL+ SV++ I V+W   F 
Sbjct: 35  YLGLPLMSRKLKISEFEPLVVKIKAKLNFWAVKSLSFAGRLQLLSSVISGIVVFWMSTFR 94

Query: 492 LPSSVVHGLEKLIRGFLWGQVEGGKGKAKVAWSTVCLPKCKGGLAIRSLSNWNQALLLKQ 671
           LP   +  +E +   FLW        KAKV+WSTVCLPK +GGL +R  + WN AL LK 
Sbjct: 95  LPKGCIREIESMCARFLWSGGTDEHHKAKVSWSTVCLPKAEGGLGVRKFTEWNTALNLKL 154

Query: 672 VWSIVSRRNSVWVNWVYCYKLNR--CGFWRVMPVESSSWMWRKLLMLRDRFKAKFFVDVG 845
           +W + S   S+WV W   + L+     FW +    + SW WR LL LR       F  +G
Sbjct: 155 IWLLFSNSGSLWVAWHLFHNLSTSVSNFWLIKEGTTDSWNWRCLLRLRPLASKFLFCSIG 214

Query: 846 NGINTNAWIDSWLPCGPLCNVITGRMRRAEGLPLSCSVKDEHINGRW 986
           NG+  + W DSW P GPL   I     R + +PL   V D     RW
Sbjct: 215 NGLTASFWADSWTPFGPLLTFIGSDGPRNQRIPLCSKVADVVNGNRW 261


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  186 bits (473), Expect = 6e-45
 Identities = 91/217 (41%), Positives = 133/217 (61%), Gaps = 1/217 (0%)
 Frame = +3

Query: 312 YLGVPLLSKNLNARDCKPLIDKVRSRILNWKTKCLSFAGRLQLIQSVLNSIPVYWAGVFV 491
           YLG+PLL+K +   D  PL+DKVRS+I +W  + LS+AGRL LI SV+ S+  +W   + 
Sbjct: 344 YLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYR 403

Query: 492 LPSSVVHGLEKLIRGFLWGQVEGGKGKAKVAWSTVCLPKCKGGLAIRSLSNWNQALLLKQ 671
           LP+  +  +EKL   FLW   E    KAK+ W+++C  K +GGL I+SL   N+   LK 
Sbjct: 404 LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKL 463

Query: 672 VWSIVSRRNSVWVNWVYCYKLNRCGFWRVMPVES-SSWMWRKLLMLRDRFKAKFFVDVGN 848
           +W +VSR++S+WVNWV+ Y + +  FW      S  SWMW+KLL  RD  K+   V++ +
Sbjct: 464 IWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKS 523

Query: 849 GINTNAWIDSWLPCGPLCNVITGRMRRAEGLPLSCSV 959
           G +T+ W D+W   G L +V   R     G+PL+ +V
Sbjct: 524 GSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATV 560


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  186 bits (472), Expect = 7e-45
 Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 1/226 (0%)
 Frame = +3

Query: 312 YLGVPLLSKNLNARDCKPLIDKVRSRILNWKTKCLSFAGRLQLIQSVLNSIPVYWAGVFV 491
           YLGVPLLS  L A  CK L+D++ S++ +W  + LS+AGR+QLI SVL SI VYWA +F+
Sbjct: 58  YLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFL 117

Query: 492 LPSSVVHGLEKLIRGFLWGQVEGGKGKAKVAWSTVCLPKCKGGLAIRSLSNWNQALLLKQ 671
           LP  V+  +E++++ FLW   +     AKVAW  VCLPK +GGL I+S+  WN+  LLK 
Sbjct: 118 LPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKH 177

Query: 672 VWSIVSRRN-SVWVNWVYCYKLNRCGFWRVMPVESSSWMWRKLLMLRDRFKAKFFVDVGN 848
           +W++ +  + S+W  W+    L    FW +   ++ SW W K+L LR     K    +G+
Sbjct: 178 IWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGD 237

Query: 849 GINTNAWIDSWLPCGPLCNVITGRMRRAEGLPLSCSVKDEHINGRW 986
           G+ T+ W D+W P  PL +    R     G+  +  V     N  W
Sbjct: 238 GMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 283


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  186 bits (471), Expect = 1e-44
 Identities = 92/197 (46%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
 Frame = +3

Query: 312  YLGVPLLSKNLNARDCKPLIDKVRSRILNWKTKCLSFAGRLQLIQSVLNSIPVYWAGVFV 491
            YLG+PL++K L+  DC PL+++VR RI +W ++ LS+AGRL LI SVL SI  +W   F 
Sbjct: 771  YLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFR 830

Query: 492  LPSSVVHGLEKLIRGFLWGQVEGGKGKAKVAWSTVCLPKCKGGLAIRSLSNWNQALLLKQ 671
            LP   +  LEK+   FLW   E    KAK++W  VC PK +GGL +RSL   N    LK 
Sbjct: 831  LPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKL 890

Query: 672  VWSIVSRRNSVWVNWVYCYKLNRCGFWRV-MPVESSSWMWRKLLMLRDRFKAKFFVDVGN 848
            VW IVS  NS+WV WV  + L    FW V   V   SW+W+KLL  R+  K    V+VGN
Sbjct: 891  VWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGN 950

Query: 849  GINTNAWIDSWLPCGPL 899
            G  T+ W D+W   G L
Sbjct: 951  GKQTSFWYDNWSDLGQL 967


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  182 bits (462), Expect = 1e-43
 Identities = 90/217 (41%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
 Frame = +3

Query: 312  YLGVPLLSKNLNARDCKPLIDKVRSRILNWKTKCLSFAGRLQLIQSVLNSIPVYWAGVFV 491
            YLG PLL+K +   D  PL+DKVRS+I +W  + LS+AGRL LI SV+ S+  +W   + 
Sbjct: 913  YLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYR 972

Query: 492  LPSSVVHGLEKLIRGFLWGQVEGGKGKAKVAWSTVCLPKCKGGLAIRSLSNWNQALLLKQ 671
            LP+  +  +EKL   FLW   E    KAK+ W+++C  K +GGL I+SL   N+   LK 
Sbjct: 973  LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKL 1032

Query: 672  VWSIVSRRNSVWVNWVYCYKLNRCGFWRVMPVES-SSWMWRKLLMLRDRFKAKFFVDVGN 848
            +W +VSR++S+WVNWV+ Y + +  FW      S  SWMW+KLL  RD  K+   V++ +
Sbjct: 1033 IWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIKS 1092

Query: 849  GINTNAWIDSWLPCGPLCNVITGRMRRAEGLPLSCSV 959
            G +T+ W D+W     L +V   R     G+PL+ +V
Sbjct: 1093 GSSTSFWYDNWSQLRQLVDVTNARRTIDMGIPLAATV 1129


Top