BLASTX nr result

ID: Atractylodes21_contig00009404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009404
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP...   172   3e-41
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   172   3e-41
ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...   162   2e-38
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   161   5e-38
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...   161   6e-38

>ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
           [Cucumis sativus]
          Length = 156

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/116 (70%), Positives = 89/116 (76%)
 Frame = +1

Query: 1   DPNNTTIFVGGLDPNVTDEHLRQVFGQYGQLVHVKIPVGKRCGFVQFADRSCAEEALRML 180
           DPNNTTIFVG LD NVTDEHLRQVFGQYG+LVHVKIPVGKRCGFVQFADR+CAEEALR+L
Sbjct: 13  DPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVL 72

Query: 181 QGTQLGGQTVRLSWGRSPSNKQPQVEQSQXXXXXXXXXXXXXXXXXXAPVAQDPTM 348
            GTQ+GGQ +RLSWGRSPSNKQPQ + +Q                  AP  QDP M
Sbjct: 73  NGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYAPAPQDPNM 128


>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
           sativus]
          Length = 404

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/116 (70%), Positives = 89/116 (76%)
 Frame = +1

Query: 1   DPNNTTIFVGGLDPNVTDEHLRQVFGQYGQLVHVKIPVGKRCGFVQFADRSCAEEALRML 180
           DPNNTTIFVG LD NVTDEHLRQVFGQYG+LVHVKIPVGKRCGFVQFADR+CAEEALR+L
Sbjct: 261 DPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVL 320

Query: 181 QGTQLGGQTVRLSWGRSPSNKQPQVEQSQXXXXXXXXXXXXXXXXXXAPVAQDPTM 348
            GTQ+GGQ +RLSWGRSPSNKQPQ + +Q                  AP  QDP M
Sbjct: 321 NGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYAPAPQDPNM 376


>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 402

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/120 (68%), Positives = 87/120 (72%), Gaps = 4/120 (3%)
 Frame = +1

Query: 1   DPNNTTIFVGGLDPNVTDEHLRQVFGQYGQLVHVKIPVGKRCGFVQFADRSCAEEALRML 180
           DPNNTTIFVG LDPNVTD+HLRQVFGQYG+LVHVKIP GKRCGFVQFADRSCAEEALR+L
Sbjct: 261 DPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVL 320

Query: 181 QGTQLGGQTVRLSWGRSPSNKQPQVEQSQ----XXXXXXXXXXXXXXXXXXAPVAQDPTM 348
            GT LGGQ VRLSWGRSPSNKQ Q + +Q                      AP  QDP M
Sbjct: 321 NGTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSGGGGYYGYAQGGYENYGYAPAGQDPNM 380


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score =  161 bits (408), Expect = 5e-38
 Identities = 80/121 (66%), Positives = 87/121 (71%), Gaps = 5/121 (4%)
 Frame = +1

Query: 1   DPNNTTIFVGGLDPNVTDEHLRQVFGQYGQLVHVKIPVGKRCGFVQFADRSCAEEALRML 180
           DPNNTTIFVG LD NVTDEHLRQVF QYG+LVHVKIP GKRCGFVQF+DRSCAEEALR+L
Sbjct: 261 DPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRIL 320

Query: 181 QGTQLGGQTVRLSWGRSPSNKQPQVEQSQ-----XXXXXXXXXXXXXXXXXXAPVAQDPT 345
            GT +GGQ +RLSWGRSPSNKQPQ + +Q                       AP AQDP 
Sbjct: 321 NGTPIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGGYYGYGQGYENYSYAPAAQDPN 380

Query: 346 M 348
           M
Sbjct: 381 M 381


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 397

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/119 (68%), Positives = 86/119 (72%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   DPNNTTIFVGGLDPNVTDEHLRQVFGQYGQLVHVKIPVGKRCGFVQFADRSCAEEALRML 180
           DPNNTTIFVG LDPNVTD+HLRQVFG YG+LVHVKIP GKRCGFVQFADRSCAEEALR+L
Sbjct: 257 DPNNTTIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVL 316

Query: 181 QGTQLGGQTVRLSWGRSPSNKQPQVEQSQ---XXXXXXXXXXXXXXXXXXAPVAQDPTM 348
            GT LGGQ VRLSWGRSPSNKQ Q + +Q                     AP  QDP M
Sbjct: 317 NGTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSGGGYYGYAQGGYENYGYAPAGQDPNM 375


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