BLASTX nr result

ID: Atractylodes21_contig00009363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009363
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308835.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag...    91   9e-17
ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    91   2e-16
ref|NP_188870.1| DEAD-box ATP-dependent RNA helicase 9 [Arabidop...    90   2e-16
ref|XP_003530710.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    89   3e-16

>ref|XP_002308835.1| predicted protein [Populus trichocarpa] gi|222854811|gb|EEE92358.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/72 (68%), Positives = 57/72 (79%)
 Frame = +2

Query: 329 STQPAGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPA 508
           S   AG AVA   + +  G  S +GLEISNLGIS+EIV++LAKKGITKLFPIQKAVLEPA
Sbjct: 42  SVTQAGIAVADYGSDEEKGKGSEEGLEISNLGISKEIVNSLAKKGITKLFPIQKAVLEPA 101

Query: 509 MQRRDVIGRART 544
           MQ +D+ GRART
Sbjct: 102 MQGKDMFGRART 113


>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 802

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = +2

Query: 281 RSFHGSRWVSSWLPDVSTQPAGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKK 460
           RSFH S+         S   AGYA  + P  +   ++S +GLEI+ LGISQ+IV AL KK
Sbjct: 40  RSFH-SKSQPLLFRASSASRAGYAAEAFPFEEPSKSNSDEGLEIAKLGISQDIVSALEKK 98

Query: 461 GITKLFPIQKAVLEPAMQRRDVIGRART 544
           GITKLFPIQ+AVLEPAMQ RD+IGRART
Sbjct: 99  GITKLFPIQRAVLEPAMQGRDMIGRART 126


>ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine
           max]
          Length = 595

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 57/115 (49%), Positives = 72/115 (62%)
 Frame = +2

Query: 200 LVVPSSTPASPTNHNELPNRSQTNVGLRSFHGSRWVSSWLPDVSTQPAGYAVASDPAYDR 379
           L+  S+  A+ T  N     S   V  R+FH +    ++    S   A YAV   P  + 
Sbjct: 22  LISASTATATATAGNHFRLLSAA-VNSRTFHSNPGPLNFRAS-SCHRAEYAVDDFPYEEG 79

Query: 380 DGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPAMQRRDVIGRART 544
              ++ +GLEI+ LGISQ+IV ALAKKGITKLFPIQ+AVLEPAMQ RD+IGRART
Sbjct: 80  SKGNADEGLEIAKLGISQDIVSALAKKGITKLFPIQRAVLEPAMQGRDMIGRART 134


>ref|NP_188870.1| DEAD-box ATP-dependent RNA helicase 9 [Arabidopsis thaliana]
           gi|75335517|sp|Q9LUW6.1|RH9_ARATH RecName: Full=DEAD-box
           ATP-dependent RNA helicase 9 gi|9293865|dbj|BAB01768.1|
           DEAD-Box RNA helicase-like protein [Arabidopsis
           thaliana] gi|20268676|gb|AAM14042.1| putative RNA
           helicase [Arabidopsis thaliana]
           gi|332643099|gb|AEE76620.1| DEAD-box ATP-dependent RNA
           helicase 9 [Arabidopsis thaliana]
          Length = 610

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 63/150 (42%), Positives = 81/150 (54%), Gaps = 17/150 (11%)
 Frame = +2

Query: 146 SKRLTTLASLTTYNP-LKHLVVPSSTPASP-----TNHNELP-NRSQTNVGLRSFHGSRW 304
           + R T  AS+T+ N  L H + P++   S      TN   LP N S   V +R FH    
Sbjct: 13  TSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPFGVKVRDFHVKSV 72

Query: 305 VSSWLPDVSTQPAGYAVASDPAYDRDG----------ASSSDGLEISNLGISQEIVDALA 454
            S +   + +     A    P+Y+ DG          +   DGL I++LGIS EIV AL 
Sbjct: 73  PSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALK 132

Query: 455 KKGITKLFPIQKAVLEPAMQRRDVIGRART 544
            +GI KLFPIQKAVLEPAM+ RD+IGRART
Sbjct: 133 GRGIEKLFPIQKAVLEPAMEGRDMIGRART 162


>ref|XP_003530710.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine
           max]
          Length = 605

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = +2

Query: 275 GLRSFHGSRWVSSWLPDVSTQPAGYAVASDPA-YDR-DGASSSDGLEISNLGISQEIVDA 448
           G R+ H +    ++      + A +AV  D + Y+   GA+S +GLEI+NLGI+ +IVDA
Sbjct: 43  GSRTIHTNPGPLNFRASAVPRAAQFAVERDYSNYEEVSGANSDEGLEIANLGIAPQIVDA 102

Query: 449 LAKKGITKLFPIQKAVLEPAMQRRDVIGRART 544
           LAKKGI KLFPIQ+AVLEPAMQ RD+IGRART
Sbjct: 103 LAKKGIAKLFPIQRAVLEPAMQGRDMIGRART 134


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