BLASTX nr result

ID: Atractylodes21_contig00009260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00009260
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thalia...   252   4e-65
gb|AFK42492.1| unknown [Lotus japonicus]                              251   1e-64
ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Viti...   249   3e-64
ref|NP_001235424.1| uncharacterized protein LOC100527647 [Glycin...   249   3e-64
ref|XP_003543943.1| PREDICTED: 40S ribosomal protein S19-1-like ...   249   4e-64

>ref|NP_200925.1| 40S ribosomal protein S19-3 [Arabidopsis thaliana]
           gi|297793669|ref|XP_002864719.1| 40S ribosomal protein
           S19 [Arabidopsis lyrata subsp. lyrata]
           gi|27923837|sp|Q9FNP8.1|RS193_ARATH RecName: Full=40S
           ribosomal protein S19-3 gi|9759463|dbj|BAB10379.1| 40S
           ribosomal protein S19 [Arabidopsis thaliana]
           gi|34365671|gb|AAQ65147.1| At5g61170 [Arabidopsis
           thaliana] gi|51970120|dbj|BAD43752.1| 40S ribosomal
           protein S19 - like [Arabidopsis thaliana]
           gi|297310554|gb|EFH40978.1| 40S ribosomal protein S19
           [Arabidopsis lyrata subsp. lyrata]
           gi|332010047|gb|AED97430.1| 40S ribosomal protein S19-3
           [Arabidopsis thaliana]
          Length = 143

 Score =  252 bits (644), Expect = 4e-65
 Identities = 121/134 (90%), Positives = 127/134 (94%)
 Frame = +1

Query: 1   KDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAASMARKIYL 180
           KDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKTG  KELAPYDPDWYYIRAASMARK+YL
Sbjct: 8   KDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYL 67

Query: 181 RGGLGVGAFQRIYGGSKRNGSCPPHFCKSSGGVARHILQQLQNMNIVDFEAKGGRKITSN 360
           RGGLGVGAF+RIYGGSKRNGS PPHFCKSSGGVARHILQQLQ MNIVD + KGGRKITS+
Sbjct: 68  RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSS 127

Query: 361 GRRDLDQVAGRIAA 402
           G+RDLDQVAGRIAA
Sbjct: 128 GQRDLDQVAGRIAA 141


>gb|AFK42492.1| unknown [Lotus japonicus]
          Length = 144

 Score =  251 bits (640), Expect = 1e-64
 Identities = 119/137 (86%), Positives = 126/137 (91%)
 Frame = +1

Query: 1   KDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAASMARKIYL 180
           KDVSPHEFVKAYAAHLKRSGKMELP WTDIVKT  FKELAPYDPDWYYIRAASMARKIYL
Sbjct: 8   KDVSPHEFVKAYAAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYIRAASMARKIYL 67

Query: 181 RGGLGVGAFQRIYGGSKRNGSCPPHFCKSSGGVARHILQQLQNMNIVDFEAKGGRKITSN 360
           RGGLGVGAFQRIYGGS+RNGS PPHFCKSSG +ARHILQQLQ M+I++ + KGGRKITS+
Sbjct: 68  RGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQTMHIIELDNKGGRKITSS 127

Query: 361 GRRDLDQVAGRIAAVTP 411
           GRRDLDQVAGRI  V P
Sbjct: 128 GRRDLDQVAGRIVVVAP 144


>ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Vitis vinifera]
           gi|147858266|emb|CAN83920.1| hypothetical protein
           VITISV_028810 [Vitis vinifera]
           gi|297733901|emb|CBI15148.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  249 bits (637), Expect = 3e-64
 Identities = 116/133 (87%), Positives = 127/133 (95%)
 Frame = +1

Query: 1   KDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAASMARKIYL 180
           KDVSPHEFV AYAAHLKRSGK+ELPHWTDIVKT TFKELAPYDPDWYYIRAASMARKIYL
Sbjct: 8   KDVSPHEFVNAYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAASMARKIYL 67

Query: 181 RGGLGVGAFQRIYGGSKRNGSCPPHFCKSSGGVARHILQQLQNMNIVDFEAKGGRKITSN 360
           RGG+GVGAF+RIYGGSKRNGS PPHFCKSSG +ARHILQQLQ MNI++ ++KGGR+ITS+
Sbjct: 68  RGGIGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKGGRRITSS 127

Query: 361 GRRDLDQVAGRIA 399
           G+RDLDQVAGRIA
Sbjct: 128 GQRDLDQVAGRIA 140


>ref|NP_001235424.1| uncharacterized protein LOC100527647 [Glycine max]
           gi|255632850|gb|ACU16778.1| unknown [Glycine max]
          Length = 143

 Score =  249 bits (636), Expect = 3e-64
 Identities = 118/132 (89%), Positives = 125/132 (94%)
 Frame = +1

Query: 1   KDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAASMARKIYL 180
           KDVSPH+FVKAYA+HLKRSGKMELP WTDIVKT  FKELAPYDPDWYYIRAASMARKIYL
Sbjct: 8   KDVSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYIRAASMARKIYL 67

Query: 181 RGGLGVGAFQRIYGGSKRNGSCPPHFCKSSGGVARHILQQLQNMNIVDFEAKGGRKITSN 360
           RGGLGVGAFQRIYGGSKRNGS PPHFCKSSG +ARHILQQLQNM+IV+ + KGGRKITS+
Sbjct: 68  RGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMSIVEIDTKGGRKITSS 127

Query: 361 GRRDLDQVAGRI 396
           GRRDLDQVAGRI
Sbjct: 128 GRRDLDQVAGRI 139


>ref|XP_003543943.1| PREDICTED: 40S ribosomal protein S19-1-like [Glycine max]
          Length = 143

 Score =  249 bits (635), Expect = 4e-64
 Identities = 117/132 (88%), Positives = 125/132 (94%)
 Frame = +1

Query: 1   KDVSPHEFVKAYAAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAASMARKIYL 180
           KDVSPH+FVKAYA+HLKRSGKMELP WTDIVKT  FKELAPYDPDWYY+RAASMARKIYL
Sbjct: 8   KDVSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYL 67

Query: 181 RGGLGVGAFQRIYGGSKRNGSCPPHFCKSSGGVARHILQQLQNMNIVDFEAKGGRKITSN 360
           RGGLGVGAFQRIYGGSKRNGS PPHFCKSSG +ARHILQQLQNM+IV+ + KGGRKITS+
Sbjct: 68  RGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMSIVEIDTKGGRKITSS 127

Query: 361 GRRDLDQVAGRI 396
           GRRDLDQVAGRI
Sbjct: 128 GRRDLDQVAGRI 139


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