BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008364
         (4002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1729   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1710   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1656   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1653   0.0  
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2...  1652   0.0  

>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1729 bits (4477), Expect = 0.0
 Identities = 846/1174 (72%), Positives = 988/1174 (84%), Gaps = 8/1174 (0%)
 Frame = -3

Query: 3709 VRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYDP 3530
            + DL++  LK F K+ + SFF  YGLI HQINS+NDFIK GIQ VFDS GEI +EPGYDP
Sbjct: 38   IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 97

Query: 3529 SKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLPRHARLQNMTYSSRMKV 3350
            SK+G  +WRYAS++FGKVTLERPR W G+      GK  L+FLPRHARLQNMTYSSRMK 
Sbjct: 98   SKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKESLNFLPRHARLQNMTYSSRMKA 153

Query: 3349 QITKEVYTQELVRSDKFKTGKE-KYLDKKVIDTEEGEVSIGSIPVMVNSDSCWMSRVEKD 3173
            Q+  +VYTQ+LVRSDK+KTGK+ KY++KKVI  +  ++ IG IPVMV S+ CWM+ VE+ 
Sbjct: 154  QVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERG 213

Query: 3172 DCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLASSPNWRVQYRSVHKRKRVYVKLADTPK 2993
            DC+YD GGYF+IKGAEKTFIAQE++ L R+W++S+P W V YR + KRKRVYVKL + PK
Sbjct: 214  DCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPK 272

Query: 2992 VEDIGGGAQVITAYILSLKDIPIWILFFALGVASDKEVVDLIDADIKDGNIVNILIASIH 2813
             E+  GG +V+T Y  S  +IPIWILFFALG +SDKEVVDLID +I D  I NIL+ASIH
Sbjct: 273  DENNRGGEKVLTVYFSST-EIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIH 331

Query: 2812 DADQTCNE----FRKGRNSLKFVDEVLKDSKFPPKESVKECIENYLFPNIIGFSRKARYL 2645
            +AD+   +    FR+  N++ FVD+++K  KFPP ES++ECI  YLFPN  G  +KAR+L
Sbjct: 332  EADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFL 391

Query: 2644 GYMVKCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYP 2465
            GYMVKCLL+ YTGRRK DN+DDFRNK            L VH+RHA+ RMVK+MQR+LY 
Sbjct: 392  GYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYG 451

Query: 2464 DRDLQPIDQFHRYLDASIITNGLSRAFSTGSWTHAYINMEKTSGVVAMLRRANPLQMIAD 2285
            DRDL+PI+    YLDASIITNGLSRAFSTG W+H +  ME+ SGVVA LRR NPLQM AD
Sbjct: 452  DRDLRPIEN---YLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTAD 508

Query: 2284 MRRTRQQVLYAGKAGDARYPHPSHWGKICFLSTPDGENCGLIKNLAGTALVSTTVRERFS 2105
            MR+TRQQV Y GK GDARYPHPSHWGK+CFLSTPDGENCGL+KNLA T LVST V +   
Sbjct: 509  MRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLV 568

Query: 2104 DILLACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKNSASFVAEFRRKRRRKEVPHQVEI 1925
            D L  CGMEKLVDDTST L G +KVF+DGDWVG+C++  SFV E R KRR KE+P QVEI
Sbjct: 569  DKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEI 628

Query: 1924 KRDTKHKEVRIFCDAGRVLRPLLVVQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEED 1745
            KRD +  EVRIF DAGR+LRPLLVV+NL K+KT KG  ++FQ LLD G+VELIG EEEED
Sbjct: 629  KRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEED 688

Query: 1744 CRTAWDMKYLFLENDGHD--PAKYTHCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKH 1571
            C TAW +KYL     GHD  P KYTHCELDMSF+LGLSCGIIP+ANHDHA+RVL+QS+KH
Sbjct: 689  CSTAWGIKYLL---KGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKH 745

Query: 1570 SQQAIGYSCTNPDIRVDTLSHQLFYPQRPLFKTMLSDCLEKPG-QESLKRMIPRPEFYNG 1394
            SQQAIG+S TNP+IRVDTLSHQL+YPQRPLF+TM+SDCL KPG  E  K ++PRPE++NG
Sbjct: 746  SQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNG 805

Query: 1393 QCAIVAVNVHLGYNQEDSLVMNRASLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAV 1214
            Q AIVAVNVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYK+EVDN E   KK KS +D+V
Sbjct: 806  QIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKS-EDSV 864

Query: 1213 NFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVV 1034
            +FGK+QSKIGRVDSLDDDGFPFIGANLQ+GDIVIG+  ESG DHS+KLKHTERGMVQKVV
Sbjct: 865  HFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVV 924

Query: 1033 LSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVIN 854
            +SAND+GKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVIN
Sbjct: 925  VSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVIN 984

Query: 853  PHAFPSRQTPGQMLESALGKGIALGGSQRYATPFSSLSIDAITDQLHRAGFSRWGNERLY 674
            PHAFPSRQTPGQ+LE+ALGKGIA GG  R+ATPFS+LS+DAI DQLHRAGFSRWG+ER+Y
Sbjct: 985  PHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVY 1044

Query: 673  DGRTGEIVKSLVFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM 494
            +GRTGE+++SL+FMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEM
Sbjct: 1045 NGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEM 1104

Query: 493  ERDCLIAHGASANLHERLFTLSDCSNMHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCES 314
            ERDCLIAHGA+ANLHERLFTLSD + MH+CR+CK ++++IQRSV GG K+RGPYCR CES
Sbjct: 1105 ERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCES 1164

Query: 313  VEDVIKVNVPYGAKLLTQELFSMGISLKFDTELC 212
             E+++KVNVPYGAKLL QELFSMGISLKF+T+LC
Sbjct: 1165 SEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1710 bits (4429), Expect = 0.0
 Identities = 839/1173 (71%), Positives = 980/1173 (83%), Gaps = 7/1173 (0%)
 Frame = -3

Query: 3709 VRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYDP 3530
            + DL++  LK F K+ + SFF  YGLI HQINS+NDFIK GIQ VFDS GEI +EPGYDP
Sbjct: 74   IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 133

Query: 3529 SKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLPRHARLQNMTYSSRMKV 3350
            SK+G  +WRYAS++FGKVTLERPR W G+      GK  L+FLPRHARLQNMTYSSRMK 
Sbjct: 134  SKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKESLNFLPRHARLQNMTYSSRMKA 189

Query: 3349 QITKEVYTQELVRSDKFKTGKE-KYLDKKVIDTEEGEVSIGSIPVMVNSDSCWMSRVEKD 3173
            Q+  +VYTQ+LVRSDK+KTGK+ KY++KKVI  +  ++ IG IPVMV S+ CWM+ VE+ 
Sbjct: 190  QVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERG 249

Query: 3172 DCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLASSPNWRVQYRSVHKRKRVYVKLADTPK 2993
            DC+YD GGYF+IKGAEKTFIAQE++ L R+W++S+P W V YR + KRKRVYVKL + PK
Sbjct: 250  DCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPK 308

Query: 2992 VEDIGGGAQVITAYILSLKDIPIWILFFALGVASDKEVVDLIDADIKDGNIVNILIASIH 2813
             E+  GG +V+T Y  S  +IPIWILFFALG +SDKEVVDLID +I D  I NIL+ASIH
Sbjct: 309  DENNRGGEKVLTVYFSST-EIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIH 367

Query: 2812 DADQTCNE----FRKGRNSLKFVDEVLKDSKFPPKESVKECIENYLFPNIIGFSRKARYL 2645
            +AD+   +    FR+  N++ FVD+++K  KFPP ES++ECI  YLFPN  G  +KAR+L
Sbjct: 368  EADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFL 427

Query: 2644 GYMVKCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYP 2465
            GYMVKCLL+ YTGRRK DN+DDFRNK            L VH+RHA+ RMVK+MQR+LY 
Sbjct: 428  GYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYG 487

Query: 2464 DRDLQPIDQFHRYLDASIITNGLSRAFSTGSWTHAYINMEKTSGVVAMLRRANPLQMIAD 2285
            DRDL+PI+    YLDASIITNGLSRAFSTG W+H +  ME+ SGVVA LRR NPLQM AD
Sbjct: 488  DRDLRPIEN---YLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTAD 544

Query: 2284 MRRTRQQVLYAGKAGDARYPHPSHWGKICFLSTPDGENCGLIKNLAGTALVSTTVRERFS 2105
            MR+TRQQV Y GK GDARYPHPSHWGK+CFLSTPDGENCGL+KNLA T LVST V +   
Sbjct: 545  MRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLV 604

Query: 2104 DILLACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKNSASFVAEFRRKRRRKEVPHQVEI 1925
            D L  CGMEKLVDDTST L G +KVF+DGDWVG+C++  SFV E R KRR KE+P QVEI
Sbjct: 605  DKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEI 664

Query: 1924 KRDTKHKEVRIFCDAGRVLRPLLVVQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEED 1745
            KRD +  EVRIF DAGR+LRPLLVV+NL K+KT KG  ++FQ LLD G+VELIG EEEED
Sbjct: 665  KRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEED 724

Query: 1744 CRTAWDMKYLFLENDGHD--PAKYTHCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKH 1571
            C TAW +KYL     GHD  P KYTHCELDMSF+LGLSCGIIP+ANHDHA+RVL+QS+KH
Sbjct: 725  CSTAWGIKYLL---KGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKH 781

Query: 1570 SQQAIGYSCTNPDIRVDTLSHQLFYPQRPLFKTMLSDCLEKPGQESLKRMIPRPEFYNGQ 1391
            SQQAIG+S TNP+IRVDTLSHQL+YPQRPLF+TM+SD             +PRPE++NGQ
Sbjct: 782  SQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISD-------------LPRPEYFNGQ 828

Query: 1390 CAIVAVNVHLGYNQEDSLVMNRASLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVN 1211
             AIVAVNVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYK+EVDN E   KK KS +D+V+
Sbjct: 829  IAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKS-EDSVH 887

Query: 1210 FGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVL 1031
            FGK+QSKIGRVDSLDDDGFPFIGANLQ+GDIVIG+  ESG DHS+KLKHTERGMVQKVV+
Sbjct: 888  FGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVV 947

Query: 1030 SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINP 851
            SAND+GKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINP
Sbjct: 948  SANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINP 1007

Query: 850  HAFPSRQTPGQMLESALGKGIALGGSQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYD 671
            HAFPSRQTPGQ+LE+ALGKGIA GG  R+ATPFS+LS+DAI DQLHRAGFSRWG+ER+Y+
Sbjct: 1008 HAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYN 1067

Query: 670  GRTGEIVKSLVFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 491
            GRTGE+++SL+FMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEME
Sbjct: 1068 GRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEME 1127

Query: 490  RDCLIAHGASANLHERLFTLSDCSNMHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESV 311
            RDCLIAHGA+ANLHERLFTLSD + MH+CR+CK ++++IQRSV GG K+RGPYCR CES 
Sbjct: 1128 RDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESS 1187

Query: 310  EDVIKVNVPYGAKLLTQELFSMGISLKFDTELC 212
            E+++KVNVPYGAKLL QELFSMGISLKF+T+LC
Sbjct: 1188 EEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1656 bits (4288), Expect = 0.0
 Identities = 803/1168 (68%), Positives = 957/1168 (81%), Gaps = 1/1168 (0%)
 Frame = -3

Query: 3712 SVRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYD 3533
            S+ D+ E  LK+F  +A+T FF  YGLISHQINSYNDFI  GIQ  FDS GE+ +EPGYD
Sbjct: 50   SLTDIGEAKLKDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYD 109

Query: 3532 PSKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLPRHARLQNMTYSSRMK 3353
            PSKKG NEWRYAS+KFGKV LE+P FW+G   +D+        LPRHARLQNMTYSS+MK
Sbjct: 110  PSKKGENEWRYASVKFGKVALEKPTFWSG---ADEH-----KMLPRHARLQNMTYSSKMK 161

Query: 3352 VQITKEVYTQELVRSDKFKTGKEKYLDKKVIDTEEGEVSIGSIPVMVNSDSCWMSRVEKD 3173
            V ++ EVYT+++VRSDKFKTGK++Y+DK+V++T+   ++IGS+PVMV SD CWM   EK 
Sbjct: 162  VNVSVEVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKG 221

Query: 3172 DCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLASSPNWRVQYRSVHKRKRVYVKLADTPK 2993
            DCD+D GGYF+IKGAEK FIAQE++ L R+W+++   W V Y+S  KR R+ V+L     
Sbjct: 222  DCDFDHGGYFLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSA 281

Query: 2992 VEDIGGGAQVITAYILSLKDIPIWILFFALGVASDKEVVDLIDADIKDGNIVNILIASIH 2813
            +ED+    + +T Y LS  +IP+WILFFALGV SDKEV+DLI     D  IVNI  ASIH
Sbjct: 282  LEDVKAEKKCLTVYFLST-EIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIH 340

Query: 2812 DADQTCNEFRKGRNSLKFVDEVLKDSKFPPKESVKECIENYLFPNIIGFSRKARYLGYMV 2633
            DAD+    FR+G+ +L++V   ++ ++FPP E+ ++    YLFP +    +KAR+LGYMV
Sbjct: 341  DADEKTEGFRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMV 399

Query: 2632 KCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYPDRDL 2453
            KCLL+ Y G+RK +N D FRNK            L VH+ HA+ RM K++Q+DLY DRD+
Sbjct: 400  KCLLQAYNGQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDV 459

Query: 2452 QPIDQFHRYLDASIITNGLSRAFSTGSWTHAYINMEKTSGVVAMLRRANPLQMIADMRRT 2273
            +PI+    YLDASI+TNGLSRAFSTG+W+H Y  ME+ SGVVA L RANPLQ + D+R+T
Sbjct: 460  RPIEH---YLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKT 516

Query: 2272 RQQVLYAGKAGDARYPHPSHWGKICFLSTPDGENCGLIKNLAGTALVSTTVRERFSDILL 2093
            R  V Y GK GDAR+PHPSHWG++CFLSTPDGENCGL+KNLA T LVS  + E   D L+
Sbjct: 517  RYHVQYTGKVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLI 576

Query: 2092 ACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKNSASFVAEFRRKRRRKEVPHQVEIKRDT 1913
            A GMEK+ +D+ + L   DKVF++G+WVG+C++S  FVAE RR RRRK++P QVEIKRD 
Sbjct: 577  ARGMEKVPEDSHSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDE 636

Query: 1912 KHKEVRIFCDAGRVLRPLLVVQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEEDCRTA 1733
            + +EVRIF DAGR+LRPLLVVQNLHKI+  KGG  +FQ LLD G++E +G EEEEDC TA
Sbjct: 637  QQQEVRIFSDAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTA 696

Query: 1732 WDMKYLFLENDGHDPAKYTHCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIG 1553
            W +K+L    DG    KYTHCELDMSF+LGLSCGIIPFANHDHA+RVL+Q+QKHSQQAIG
Sbjct: 697  WGIKFLLSGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 756

Query: 1552 YSCTNPDIRVDTLSHQLFYPQRPLFKTMLSDCLEKPGQ-ESLKRMIPRPEFYNGQCAIVA 1376
            +  TNP+IRVDTLSHQL+YPQRPLF+T+ SDCL KPG       ++P+PE YNGQ AIVA
Sbjct: 757  FPTTNPNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVA 816

Query: 1375 VNVHLGYNQEDSLVMNRASLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQ 1196
            VNVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYKA+VDN E+  K+ K  DD VNFGKI 
Sbjct: 817  VNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKY-DDNVNFGKIP 875

Query: 1195 SKIGRVDSLDDDGFPFIGANLQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDE 1016
            SKIGRVDSLDDDGFPFIGANLQSGDIVIG+  ESG DHS+KLKHTERGMVQKVVLS+NDE
Sbjct: 876  SKIGRVDSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDE 935

Query: 1015 GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPS 836
            GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPH+FPS
Sbjct: 936  GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPS 995

Query: 835  RQTPGQMLESALGKGIALGGSQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGE 656
            RQTPGQ+LE+ALGKGIA GGS +YATPFS+LS++AIT+QLHRAGFSRWGNER+Y+GRTGE
Sbjct: 996  RQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGE 1055

Query: 655  IVKSLVFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 476
            +V+SL+FMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI
Sbjct: 1056 MVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1115

Query: 475  AHGASANLHERLFTLSDCSNMHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIK 296
            AHGASANLHERLFTLSD S MH+C+KCK +A++IQR+VPGG KIRGPYCRVCESV++++K
Sbjct: 1116 AHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVK 1175

Query: 295  VNVPYGAKLLTQELFSMGISLKFDTELC 212
            VNVPYGAKLL QELFSMGISLKF+T LC
Sbjct: 1176 VNVPYGAKLLCQELFSMGISLKFETRLC 1203


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1653 bits (4280), Expect = 0.0
 Identities = 800/1172 (68%), Positives = 965/1172 (82%), Gaps = 5/1172 (0%)
 Frame = -3

Query: 3712 SVRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYD 3533
            ++ DL E  LK+F K++S +FF  YGLISHQINSYNDFIK GIQ  FD  G+I ++PGYD
Sbjct: 39   NIHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYD 98

Query: 3532 PSKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLPRHARLQNMTYSSRMK 3353
            PSKKG+ EWRYA++KFGKVTL++P+FW G       GK Y + LPRHARLQNMTYSSRMK
Sbjct: 99   PSKKGDGEWRYATVKFGKVTLDKPKFWGGAA----SGKEY-NMLPRHARLQNMTYSSRMK 153

Query: 3352 VQITKEVYTQELVRSDKFKTGKEKYLDKKVID--TEEGEVSIGSIPVMVNSDSCWMSRVE 3179
            + I+ E+YTQ+LV SDKFKTGK++Y+DK+ ++  ++  +V IG +PVMVNSD CWM   +
Sbjct: 154  INISLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQ 213

Query: 3178 KDDCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLASSPNWRVQYRSVHKRKRVYVKLADT 2999
            K DC++D+GGYF+IKGAEK FIAQE++ L R+W+++   W V YRS  KR R+ ++L + 
Sbjct: 214  KRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVEN 273

Query: 2998 PKVEDIGGGAQVITAYILSLKDIPIWILFFALGVASDKEVVDLIDADIKDGNIVNILIAS 2819
             K ED+    +V+  Y LS  ++P+WILFFALGV+SDKE+VDLID    D  ++NIL AS
Sbjct: 274  SKSEDLKSKEKVLNVYFLST-EVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFAS 332

Query: 2818 IH--DADQTCNEFRKGRNSLKFVDEVLKDSKFPPKESVKECIENYLFPNIIGFSRKARYL 2645
            +   D D    +FR+G+ +L F+D  ++ + FPP + +++C+  YLF ++ G  +K  +L
Sbjct: 333  VREVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFL 392

Query: 2644 GYMVKCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYP 2465
            GYMVKCLL+ YTGRRK DN+DDFRNK            L VH+ HA+ RM K++QRDLY 
Sbjct: 393  GYMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYG 452

Query: 2464 DRDLQPIDQFHRYLDASIITNGLSRAFSTGSWTHAYINMEKTSGVVAMLRRANPLQMIAD 2285
            DR + PI+    YLDASIITNGLSRAFSTG+W HA+  ME+ SGVVA L RANPLQ +A+
Sbjct: 453  DRQVHPIEH---YLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQTMAE 509

Query: 2284 MRRTRQQVLYAGKAGDARYPHPSHWGKICFLSTPDGENCGLIKNLAGTALVSTTVRERFS 2105
            +RRTRQQV Y GK GDARYPHPSHWG++CFLSTPDGENCGLIKNL+GT LVS   ++  +
Sbjct: 510  LRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTKKSIT 569

Query: 2104 DILLACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKNSASFVAEFRRKRRRKEVPHQVEI 1925
              L  CGME LVD+TSTS CG  ++F+DG+WVG+C++S SFV   RRKRRR    HQVE+
Sbjct: 570  PTLFRCGMENLVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEV 629

Query: 1924 KRDTKHKEVRIFCDAGRVLRPLLVVQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEED 1745
            KRD + KEVRIF DAGR+LRPLLVV+NL++I   KG  Y+FQ LLD G++ELIG EEEED
Sbjct: 630  KRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEED 689

Query: 1744 CRTAWDMKYLFLENDGHDPAKYTHCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQ 1565
            CR AW +K+L +E++G    KY+HCELDMSF+LGLSCG++PFANHDHA+R LFQSQKHS 
Sbjct: 690  CRVAWSIKHL-MEDEG--TTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSN 746

Query: 1564 QAIGYSCTNPDIRVDTLSHQLFYPQRPLFKTMLSDCLEKPGQ-ESLKRMIPRPEFYNGQC 1388
            QAIG+S TN + RVDTLSHQL YPQRPLF+TM +DCL  PG   S   ++P+PEFYNGQ 
Sbjct: 747  QAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQN 806

Query: 1387 AIVAVNVHLGYNQEDSLVMNRASLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNF 1208
            AIVAVNVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYKAEVDN E   K+ KS DDA+NF
Sbjct: 807  AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKS-DDAINF 865

Query: 1207 GKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLS 1028
            GK QSKIGRVDSLDDDGFP+IGANLQSGDIVIG+  ESG+DHS+KLKHTE+GMVQKVVLS
Sbjct: 866  GKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLS 925

Query: 1027 ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPH 848
            +ND+GKN+AVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINPH
Sbjct: 926  SNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPH 985

Query: 847  AFPSRQTPGQMLESALGKGIALGGSQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDG 668
            AFPSRQTPGQ+LE+ALGKGIA GGS +YATPFS+ S+DAITDQLHRAGFSRWG+ER+Y+G
Sbjct: 986  AFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNG 1045

Query: 667  RTGEIVKSLVFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 488
            RTGE+++SL+FMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Sbjct: 1046 RTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 1105

Query: 487  DCLIAHGASANLHERLFTLSDCSNMHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVE 308
            DCLIAHGASANLHERLFTLSD S MHVC+KCK +AS+IQRSV GG K+RGPYCRVCES +
Sbjct: 1106 DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFD 1165

Query: 307  DVIKVNVPYGAKLLTQELFSMGISLKFDTELC 212
            D+++VNVPYGAKLL QELFSMGI+LKF+T+LC
Sbjct: 1166 DIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197


>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
            predicted protein [Populus trichocarpa]
          Length = 1160

 Score = 1652 bits (4278), Expect = 0.0
 Identities = 803/1166 (68%), Positives = 951/1166 (81%)
 Frame = -3

Query: 3712 SVRDLDELSLKNFSKRASTSFFKHYGLISHQINSYNDFIKVGIQDVFDSMGEITIEPGYD 3533
            ++ +L + +L++F K+A++ FF  YGLISHQINSYN FI  G+Q VFDS GE+ +EPGYD
Sbjct: 14   NLNELGKETLQSFCKKAASLFFDEYGLISHQINSYNSFINSGLQRVFDSFGEVAVEPGYD 73

Query: 3532 PSKKGNNEWRYASIKFGKVTLERPRFWTGDKFSDDGGKGYLDFLPRHARLQNMTYSSRMK 3353
             SK+ + EWR AS++FGKVTL+RP FW G     +      +  PRHARLQNMTYS+RMK
Sbjct: 74   SSKQKDGEWRRASVRFGKVTLDRPSFWGGTSSDAEH-----NMFPRHARLQNMTYSARMK 128

Query: 3352 VQITKEVYTQELVRSDKFKTGKEKYLDKKVIDTEEGEVSIGSIPVMVNSDSCWMSRVEKD 3173
            + +  +VYTQ + RSDKFKTG +K + K V+ TE  E+ IG IPVMV SD CW++ VEK 
Sbjct: 129  IHVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKG 188

Query: 3172 DCDYDQGGYFIIKGAEKTFIAQERLGLDRVWLASSPNWRVQYRSVHKRKRVYVKLADTPK 2993
            DCD+D GGYF+IKGAEK FIAQE++ + R+W+++S  W V Y+S  KR R+ V+L +  K
Sbjct: 189  DCDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSK 248

Query: 2992 VEDIGGGAQVITAYILSLKDIPIWILFFALGVASDKEVVDLIDADIKDGNIVNILIASIH 2813
            +E I G  + +  Y LS  +IP+WILFFALGV SDKEV+DLID    D +IVNI  ASIH
Sbjct: 249  LEYIKGEKKGLCVYFLST-EIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIH 307

Query: 2812 DADQTCNEFRKGRNSLKFVDEVLKDSKFPPKESVKECIENYLFPNIIGFSRKARYLGYMV 2633
            DAD+ C  FR+   +L +VD++LK ++FPPKES+++ I  YLFP +     KAR+LGYMV
Sbjct: 308  DADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMV 367

Query: 2632 KCLLEGYTGRRKVDNKDDFRNKXXXXXXXXXXXXLNVHLRHAKMRMVKSMQRDLYPDRDL 2453
            KCLLE YTG RK DN+D FRNK            L VH+ HA  RM K++QRDLY DRD+
Sbjct: 368  KCLLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDV 427

Query: 2452 QPIDQFHRYLDASIITNGLSRAFSTGSWTHAYINMEKTSGVVAMLRRANPLQMIADMRRT 2273
             PI+    YLDASI+TNGL+RAFSTG+W H +  ME+ SGVV  L RANPLQ + D+R+T
Sbjct: 428  HPIEH---YLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKT 484

Query: 2272 RQQVLYAGKAGDARYPHPSHWGKICFLSTPDGENCGLIKNLAGTALVSTTVRERFSDILL 2093
            RQQVLY GK GDARYPHPSHWG++CFLSTPDGENCGL+KNLA T +VST + E   D L 
Sbjct: 485  RQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLF 544

Query: 2092 ACGMEKLVDDTSTSLCGMDKVFVDGDWVGICKNSASFVAEFRRKRRRKEVPHQVEIKRDT 1913
              GMEKLVDDT T L G  KVF++G+WVG+C++S  FV E R  RRR+E+P+QVEIKRD 
Sbjct: 545  DSGMEKLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDE 604

Query: 1912 KHKEVRIFCDAGRVLRPLLVVQNLHKIKTLKGGGYSFQDLLDNGVVELIGPEEEEDCRTA 1733
            + +EVRIF DAGR+LRPLLVV+NL KIK  KGG Y F  LLD G++E IG EEEEDC TA
Sbjct: 605  QQREVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTA 664

Query: 1732 WDMKYLFLENDGHDPAKYTHCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIG 1553
            W +K+L  + +G  P KY+HCELDMSF+LGLSCGIIPFANHDHA+RVL+Q+QKHSQQAIG
Sbjct: 665  WGIKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 724

Query: 1552 YSCTNPDIRVDTLSHQLFYPQRPLFKTMLSDCLEKPGQESLKRMIPRPEFYNGQCAIVAV 1373
            +S TNP+IRVDTLSHQL YPQRPLF+TM+SDCL          ++P+PE +NGQ AIVAV
Sbjct: 725  FSTTNPNIRVDTLSHQLHYPQRPLFRTMISDCL----------VLPKPELFNGQNAIVAV 774

Query: 1372 NVHLGYNQEDSLVMNRASLDRGMFRSEHIRSYKAEVDNTEVKGKKIKSSDDAVNFGKIQS 1193
            NVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYKAEVDN E+  K+ KS +D++ FGKIQS
Sbjct: 775  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKS-EDSITFGKIQS 833

Query: 1192 KIGRVDSLDDDGFPFIGANLQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDEG 1013
            KIGRVDSLDDDGFPFIGAN+QSGDIVIGK  ESG+DHSVKLKHTERGMVQKVVLS+NDEG
Sbjct: 834  KIGRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEG 893

Query: 1012 KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPSR 833
            KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT+QG+VPDIVINPHAFPSR
Sbjct: 894  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSR 953

Query: 832  QTPGQMLESALGKGIALGGSQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGEI 653
            QTPGQ+LE+ALGKGIA GGS+RYATPFS+LS+D I DQLHRA FSRWGNER+Y+GRTGE+
Sbjct: 954  QTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEM 1013

Query: 652  VKSLVFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 473
            V+SL+FMGPTFYQRLVHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA
Sbjct: 1014 VRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1073

Query: 472  HGASANLHERLFTLSDCSNMHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIKV 293
            HGASANLHERLFTLSD S MH+C+KCK +A++IQR VPGG KIRGPYCRVCESV+D++KV
Sbjct: 1074 HGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKV 1133

Query: 292  NVPYGAKLLTQELFSMGISLKFDTEL 215
            +VPYGAKLL QELFSMGISLKFDT +
Sbjct: 1134 SVPYGAKLLCQELFSMGISLKFDTRV 1159