BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008287
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...    69   7e-10
ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucum...    62   1e-07
ref|XP_002531919.1| RNA and export factor binding protein, putat...    59   9e-07

>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 47/114 (41%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   GKPMKIEIEGSNPEIPVSARVNVFGGLNG--QRTVVMTSXXXXXXXXXXXXXXXXQRNRG 175
           GKPMKIEI GS+ ++PVSARVNV GG+NG  +RTVVMT                 +R RG
Sbjct: 163 GKPMKIEIIGSDSDMPVSARVNVIGGVNGKRRRTVVMTPGVGHARGSTAINRSSSRRGRG 222

Query: 176 GTWNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPAVEKSTEELDKELENYH 337
           G  N                               K  VEKS  ELDKEL+NYH
Sbjct: 223 GLSNG-------------RGRGRAGSRGRGRGRGRKQPVEKSAVELDKELDNYH 263


>ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
          Length = 286

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 46/118 (38%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
 Frame = +2

Query: 2   GKPMKIEIEGSNPEIPVSARVNVFGGLNG--QRTVVMTSXXXXXXXXXXXXXXXXQRNRG 175
           GKPMKIE+ G N E+PVSAR+NV  G NG  +RTVV+TS                  +RG
Sbjct: 164 GKPMKIEMLGDNAEMPVSARINV-TGTNGRNRRTVVLTSESGRNATSNVVNSFPGPSHRG 222

Query: 176 GTWNA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPAVEKSTEELDKELENYH 337
           G  NA                                  K  VEKS++ELDKELENYH
Sbjct: 223 GLRNARGRGRGAWSRGVGLGGGSGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYH 280


>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223528429|gb|EEF30463.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 268

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 44/114 (38%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   GKPMKIEIEGSNPEIPVSARVNVFGGLNG--QRTVVMTSXXXXXXXXXXXXXXXXQRNRG 175
           GKPMKIEI G   E P+SARVNV  G+NG  +RTVVMT                 QR+RG
Sbjct: 162 GKPMKIEIVGVTGEAPISARVNV-TGINGRRKRTVVMTPGPGRGRGFAPSNRGAGQRSRG 220

Query: 176 GTWNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPAVEKSTEELDKELENYH 337
           G  N                               K  +EKS +ELDKEL+ YH
Sbjct: 221 GLRN------------LGRGRGRGRGRGGHGGRGKKQPLEKSADELDKELDTYH 262