BLASTX nr result

ID: Atractylodes21_contig00008286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008286
         (1902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   649   0.0  
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   643   0.0  
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   624   e-176
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              610   e-172
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...   518   e-144

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  649 bits (1675), Expect = 0.0
 Identities = 364/588 (61%), Positives = 420/588 (71%), Gaps = 38/588 (6%)
 Frame = +2

Query: 125  MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHSLINKAKTH 304
            MDF+ESTKVVYNRIQKLEPENVSKIIGYLLLQDH EREMIRLAF PDNLI+SLI KAK+ 
Sbjct: 1    MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60

Query: 305  LNLPSNSATSTPVLPPGVNS--VSDMPIKFIPFSPGGLARP--SPLAI------------ 436
            L L +  A S P+ P  VN+  VSD+P++F PFSP   A P  SP A             
Sbjct: 61   LGL-NKPALSAPISPSQVNTSPVSDIPLQFTPFSPAS-AHPISSPAASRRTASAYWDAQV 118

Query: 437  -----QVPNRCCDSHGQSFTVYPASLPEDYHFQNQLHFLPLEDQIEP--------SNNYY 577
                 QVPN    S G S TV     PEDY  QN + FL L+DQ E         S+NY+
Sbjct: 119  TGDQQQVPNLDFGSPGYSDTV-----PEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYF 173

Query: 578  YSDPTTLGPRTNRRSPTSPEFPIKICHYFMKGCCRHGNNCRYSHGNPMPESFS-LFSPGS 754
            YS+P  LGPRTNRRSP+ PEFP+KICHYF KG C+HGNNCRY HG+PMPE FS +FS  S
Sbjct: 174  YSEPA-LGPRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKS 232

Query: 755  YE---DDHAFSPGSXXXXXXXXXXXXXSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTES 925
             +   D+H  SPGS             SRRG PVSIASLPM+YYEK+GKTLQAEGYLTES
Sbjct: 233  NDFSNDEHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTES 292

Query: 926  QRHGKAGYSLTKLLARL-NRISLIDRPHGQHSVILADEIAKYMDYNGDRNEQGGIVAGSR 1102
            QRHGKAGYSLTKLLARL N I +IDRPHGQHSVIL +++ KY++Y G+RN+ GGIVAGSR
Sbjct: 293  QRHGKAGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSR 352

Query: 1103 QIYLTFPAESTFTEQDVSNYFKKFGPVHDVRIPCQQKRMFGFVTFANGETVKEILNKGNP 1282
            QIYLTFPAES FTE DVS YF KFGPV DVRIPCQQKRMFGFVTF   ETVK+IL KGNP
Sbjct: 353  QIYLTFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNP 412

Query: 1283 HFVCGARVLVKPYREKSR-DDRKNGDKFRHAMYYGTHGLDAESELQSMVRNCDSLALLKK 1459
            H+VCGARVLVKPYREKSR  DRK  +K +H MY  +H +D +SEL  M    D+  LL+K
Sbjct: 413  HYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRK 472

Query: 1460 QLIIEEQQ--EHERLRFSEMQLAAKPTNQLTCFGFSLEELQIPEGHRGQMNLSSAERFGH 1633
            QL+ E +   E ER R  E  L  K  N  +  G S++EL++ E H       SAERF +
Sbjct: 473  QLMEENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSEEH---AEFPSAERFNY 529

Query: 1634 LLDVLNNGSASDER-RHINTKYNDQENSQGVNLPDSPFASPLGSGIST 1774
            LLDVLNNGS+S+ + R I+T YNDQ+ SQG+NLP+SPFASP+ SGIST
Sbjct: 530  LLDVLNNGSSSEGKFRRISTNYNDQD-SQGINLPESPFASPIRSGIST 576


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  643 bits (1659), Expect = 0.0
 Identities = 349/582 (59%), Positives = 420/582 (72%), Gaps = 30/582 (5%)
 Frame = +2

Query: 125  MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHSLINKAKTH 304
            MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGER+MIR AF  DN I  LINKAK  
Sbjct: 1    MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 305  LNLPSNSATSTPVLPPGVNS--VSDMPIKFIPFSPGGLARPSPLAIQVPNRCCDS--HGQ 472
            L L S  A S+P+ PP VN   VSD+P++F PFSP   ARP P + +  N   D   +G 
Sbjct: 61   LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPAS-ARPFP-SPRPGNSYWDPQVNGD 118

Query: 473  SFTV----------YPASLPEDYHFQNQLHFLPLEDQIEPS------NNYYYSDPTTLGP 604
               V          Y  SLP+D+  Q+Q+HFL +EDQ+E S       +YYY++   L  
Sbjct: 119  QQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFSGSYYYAEQA-LNT 177

Query: 605  RTNRRSPTSPEFPIKICHYFMKGCCRHGNNCRYSHGNPMPESFS-LFSPGSYE---DDHA 772
            R +RRSP+ PEFP+K+CHYF KG C+HGN+CRY HG+PM ESFS +FSPG+ E   DDH 
Sbjct: 178  RISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHV 237

Query: 773  FSPGSXXXXXXXXXXXXXSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYS 952
            F PGS             SRRG PVSIASLPM+YYEK+G+TLQAEGYLTESQRHGKAGYS
Sbjct: 238  FPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYS 297

Query: 953  LTKLLARL-NRISLIDRPHGQHSVILADEIAKYMDYNGDRNEQGGIVAGSRQIYLTFPAE 1129
            LTKLLARL N I LIDRPHGQHSVILA+++ KYM+ NG+R++ G IV  S+QIYLTFPA+
Sbjct: 298  LTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPAD 357

Query: 1130 STFTEQDVSNYFKKFGPVHDVRIPCQQKRMFGFVTFANGETVKEILNKGNPHFVCGARVL 1309
            STFTEQDVSNYF KFGPV DVRIPCQQKRMFGFVTF   ETVK+IL KGNPH++CGARVL
Sbjct: 358  STFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVL 417

Query: 1310 VKPYREKSRDDRKNGDKFRHAMYYGTHGLDAESELQSMVRNCDSLALLKKQLIIEEQQ-- 1483
            VKPYREK+    +  D+ +H MYY  H +D +SELQS+ R CD+  LL+KQ ++EE +  
Sbjct: 418  VKPYREKA--SSRTVDRRQHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHEQA 475

Query: 1484 -EHERLRFSEMQLAAKPTNQLTCFGFSLEELQ--IPEGHRGQMNLSSAERFGHLLDVLNN 1654
             E ER R SE+QL  K  +    FG+S++E +      H  Q    SAER  +LL+VLNN
Sbjct: 476  LELERRRLSELQLTPKTAHPY--FGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNN 533

Query: 1655 GSASDERRHINTKYNDQENSQGVNLPDSPFASPLGSGISTAT 1780
            GS S++R   +T YN+QE+SQG+NLP+SPFASP+ + IST T
Sbjct: 534  GSTSEDR---STNYNEQESSQGLNLPESPFASPIRNSISTVT 572


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  624 bits (1610), Expect = e-176
 Identities = 340/568 (59%), Positives = 410/568 (72%), Gaps = 18/568 (3%)
 Frame = +2

Query: 125  MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHSLINKAKTH 304
            MDFSESTKVVYNRIQ++EPE V KIIGY+LLQ+HGEREMIRLAF PDNLI++ I+KAK+ 
Sbjct: 1    MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60

Query: 305  LNLPSNSATSTPVLPPGVNS--VSDMPIKFIPFSPGGLARP--SPLAIQVPNRCCDSHGQ 472
            L L + +    P+ P  VN   VSD+ ++FIP +    + P  SP+ I+      D+   
Sbjct: 61   LGL-NKTPVPNPISPSQVNPAPVSDVHLQFIP-NTAVSSHPISSPIKIRTAGSFWDAQ-- 116

Query: 473  SFTVYPASLPEDYHFQNQLHFLPLEDQIEP-----SNNYYYSDPTTLGPRTNRRSPTSPE 637
                       DY  QNQ+ FL  +DQ+E      S++Y+Y +P  LGPRT+RRSP+ PE
Sbjct: 117  ---------VTDYRLQNQMQFLTSDDQLEFVNSDFSSSYFYPEPA-LGPRTSRRSPSLPE 166

Query: 638  FPIKICHYFMKGCCRHGNNCRYSHGNPMPESFS-LFSPGSYE---DDHAFSPGSXXXXXX 805
            FP+KICHYF KG C+HGNNCRY HG+PMPESFS + S  S E   D+H  SPGS      
Sbjct: 167  FPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHFISPGSLEKLEL 226

Query: 806  XXXXXXXSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARL-NR 982
                   SRRG PVSIASLPM+YYEK+G+ LQAEGYLTESQRHGKAGYSLTKLLARL N 
Sbjct: 227  ELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYSLTKLLARLKNS 286

Query: 983  ISLIDRPHGQHSVILADEIAKYMDYNGDRNEQGGIVAGSRQIYLTFPAESTFTEQDVSNY 1162
            I LIDRPHGQHSVIL +++ KY++Y G+RN+ GGIVAGSRQIYLTFPAESTFTEQDVSNY
Sbjct: 287  IRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPAESTFTEQDVSNY 346

Query: 1163 FKKFGPVHDVRIPCQQKRMFGFVTFANGETVKEILNKGNPHFVCGARVLVKPYREKSR-D 1339
            F KFGPV DVRIPCQQKRMFGFVTF   ETVK+IL+KGNPH VCGARVLVKPYREKSR  
Sbjct: 347  FSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLV 406

Query: 1340 DRKNGDKFRHAMYYGTHGLDAESELQSMVRNCDSLALLKKQLIIEEQQ--EHERLRFSEM 1513
            DRK  +K +H  +Y  H +D +SEL S+ R CD+  LL+KQL+ E +Q  E ER R SE 
Sbjct: 407  DRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEEHEQALELERRRLSEF 466

Query: 1514 QLAAKPTNQLTCFGFSLEELQIPEGHRGQMNLSSAERFGHLLDVLNNGSASDER-RHINT 1690
            QLA KP  +    G S++E ++ E    Q    SAE F +  DVLNNGS S+E+ RH  T
Sbjct: 467  QLAPKPLARHAYHGHSMDEFKLSEEQADQ--FPSAEHFNYWFDVLNNGSTSEEKHRHTRT 524

Query: 1691 KYNDQENSQGVNLPDSPFASPLGSGIST 1774
              ++Q+++QGVNLP+SPFAS +G GIST
Sbjct: 525  NCSEQDSNQGVNLPESPFASAIGKGIST 552


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  610 bits (1573), Expect = e-172
 Identities = 331/577 (57%), Positives = 397/577 (68%), Gaps = 16/577 (2%)
 Frame = +2

Query: 98   PI*IWLEPKMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIH 277
            P+  W++  MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGER+MIR AF  DN I 
Sbjct: 5    PLFSWVDTDMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQ 64

Query: 278  SLINKAKTHLNLPSNSATSTPVLPPGVNSVSDMPIKFIPFSPGGLARPSPLAIQVPNRCC 457
             LINKAK  L L S  A S+P+ PP VN                   PSP          
Sbjct: 65   CLINKAKAELGLSSKPAVSSPISPPQVN-------------------PSPS--------- 96

Query: 458  DSHGQSFTVYPASLPEDYHFQNQLHFLPLEDQIEPS------NNYYYSDPTTLGPRTNRR 619
                                 +Q+HFL +EDQ+E S       +YYY++   L  R +RR
Sbjct: 97   --------------------MSQIHFLAMEDQLENSVGSEFSGSYYYAEQA-LNTRISRR 135

Query: 620  SPTSPEFPIKICHYFMKGCCRHGNNCRYSHGNPMPESFS-LFSPGSYE---DDHAFSPGS 787
            SP+ PEFP+K+CHYF KG C+HGN+CRY HG+PM ESFS +FSPG+ E   DDH F PGS
Sbjct: 136  SPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGS 195

Query: 788  XXXXXXXXXXXXXSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLL 967
                         SRRG PVSIASLPM+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLL
Sbjct: 196  LEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLL 255

Query: 968  ARL-NRISLIDRPHGQHSVILADEIAKYMDYNGDRNEQGGIVAGSRQIYLTFPAESTFTE 1144
            ARL N I LIDRPHGQHSVILA+++ KYM+ NG+R++ G IV  S+QIYLTFPA+STFTE
Sbjct: 256  ARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADSTFTE 315

Query: 1145 QDVSNYFKKFGPVHDVRIPCQQKRMFGFVTFANGETVKEILNKGNPHFVCGARVLVKPYR 1324
            QDVSNYF KFGPV DVRIPCQQKRMFGFVTF   ETVK+IL KGNPH++CGARVLVKPYR
Sbjct: 316  QDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKPYR 375

Query: 1325 EKSRDDRKNGDKFRHAMYYGTHGLDAESELQSMVRNCDSLALLKKQLIIEEQQ---EHER 1495
            EK+    +  D+ +H MYY  H +D +SELQS+ R CD+  LL+KQ ++EE +   E ER
Sbjct: 376  EKA--SSRTVDRRQHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHEQALELER 433

Query: 1496 LRFSEMQLAAKPTNQLTCFGFSLEELQ--IPEGHRGQMNLSSAERFGHLLDVLNNGSASD 1669
             R SE+QL  K  +    FG+S++E +      H  Q    SAER  +LL+VLNNGS S+
Sbjct: 434  RRLSELQLTPKTAHPY--FGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNGSTSE 491

Query: 1670 ERRHINTKYNDQENSQGVNLPDSPFASPLGSGISTAT 1780
            +R   +T YN+QE+SQG+NLP+SPFASP+ + IST T
Sbjct: 492  DR---STNYNEQESSQGLNLPESPFASPIRNSISTVT 525


>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
            vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
            product [Vitis vinifera]
          Length = 544

 Score =  518 bits (1334), Expect = e-144
 Identities = 300/569 (52%), Positives = 362/569 (63%), Gaps = 19/569 (3%)
 Frame = +2

Query: 125  MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHSLINKAKTH 304
            MDFSEST VV+NRIQKLEPENVSKIIGYLL++   + EMIRLAFGPD  I  +I   K  
Sbjct: 1    MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60

Query: 305  LNL-PSNSATSTPVLPPGVNSVSDMPIKFIPFSPGGLARPSPLAIQVPNRCCDSHGQSFT 481
            L L P+  +  +P  PP    +S     + P S      PSP+     NR      +   
Sbjct: 61   LGLIPNPPSPISPHFPP----LSPSTGSWFPSSS-----PSPV-----NRYLQHATEQ-- 104

Query: 482  VYPASLPEDYHFQNQLHFLPLEDQIEPSN--------NYYYSDPTT--LGPRTNRRSPTS 631
                 LP+DY  Q+Q   L LE+Q+E  N        +YYY +     L  RT  RS   
Sbjct: 105  -----LPKDYSLQSQP--LGLEEQLEQVNPAILGVSGDYYYPETAVENLSVRTGPRSLIG 157

Query: 632  PEFPIKICHYFMKGCCRHGNNCRYSHGNPMPESFSLFSPGSYEDDHAFSPGSXXXXXXXX 811
             EFP+K+CHYF KG C+HGNNCRY H    PE  S  +     DDH FSPGS        
Sbjct: 158  SEFPVKVCHYFNKGFCKHGNNCRYLHAQVFPEVLSPIANDLANDDHIFSPGSIEKLELEL 217

Query: 812  XXXXXSRRGFPVSIASLPMLYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLNRISL 991
                 SRRG PVSIASLPM+YYE++G+ LQAEGYLTESQRHGKAGYSLTKLLARL  I L
Sbjct: 218  TELLKSRRGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGYSLTKLLARLRTIRL 277

Query: 992  IDRPHGQHSVILADEIAKYMDYNGDRNEQGGIVAGSRQIYLTFPAESTFTEQDVSNYFKK 1171
            IDRPHGQHSVILA+++ KYM+   +R++ G IV+GSRQIYLTFPAESTFTE+DVS+YF  
Sbjct: 278  IDRPHGQHSVILAEDVPKYMESRSERSDPGPIVSGSRQIYLTFPAESTFTEEDVSDYFST 337

Query: 1172 FGPVHDVRIPCQQKRMFGFVTFANGETVKEILNKGNPHFVCGARVLVKPYREKSR-DDRK 1348
            FG V DVRIPCQQKRMFGFVTF + +TVK IL KG+PH+VCGARVLVKPYREK R  DRK
Sbjct: 338  FGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRK 397

Query: 1349 NGDKFRHAMYYGTHGLDAESELQSMVRNCDSLALLKKQLIIEEQQ-----EHERLRFSEM 1513
              +KF  +MYY     D +SEL  M R  ++  LL+KQ I+EEQ+     E E  R S++
Sbjct: 398  YLEKFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQ-IMEEQEFAQDLEFETRRLSKL 456

Query: 1514 QLAAKPTNQLTCFGFSLEELQIPEGHRGQMNLSSAERFGHLLDVLNNGSASDER--RHIN 1687
            QLA  P       G+SL+EL++ E H       +     + LDV NNGS SD++  R +N
Sbjct: 457  QLARNPLANQLHHGYSLDELKVLEAHANHSKFPTVVHSNYPLDVSNNGSTSDDKPWRAVN 516

Query: 1688 TKYNDQENSQGVNLPDSPFASPLGSGIST 1774
               +    S G+ LPDSPFA P+GS IST
Sbjct: 517  NPID--HKSSGLELPDSPFAFPIGSSIST 543


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