BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008226
         (5116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...   528   e-147
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   468   e-128
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]   404   e-109
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]   404   e-109
gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]   403   e-109

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
            gi|18266821|sp|P15629.2|POL_SOCMV RecName: Full=Enzymatic
            polyprotein; Includes: RecName: Full=Aspartic protease;
            Includes: RecName: Full=Endonuclease; Includes: RecName:
            Full=Reverse transcriptase gi|11322953|emb|CAC16945.1|
            putative reverse transcriptase [Soybean chlorotic mottle
            virus]
          Length = 692

 Score =  528 bits (1361), Expect = e-147
 Identities = 270/430 (62%), Positives = 325/430 (75%), Gaps = 6/430 (1%)
 Frame = +1

Query: 3826 NPYATFIKVKIQNKKIVALIDTSATLCLGNKRILQNWETLEKPLKIIVADKSVHEIWSVG 4005
            NP  TFIKV I  +  +A IDT ATLC G ++I  NWE L++P +II+ADKS H I    
Sbjct: 16   NPNVTFIKVSIGKRNFLAYIDTGATLCFGKRKISNNWEILKQPKEIIIADKSKHYIREAI 75

Query: 4006 KLVEAEIEKEILIIPTVYQHDSGMDLIIGNNFLKPYQPFIQTNNDTGI------HTLKGK 4167
              V  +IE +  +IP +Y HDSG+DLIIGNNFLK YQPFIQ      +      +  + +
Sbjct: 76   SNVFLKIENKEFLIPIIYLHDSGLDLIIGNNFLKLYQPFIQRLETIELRWKNLNNPKESQ 135

Query: 4168 RITTPILKANNLIKLLQQHTKFELQTVLIATQKFLEEQLDKVCSEDPLDKDKNRNKEKII 4347
             I+T IL  N ++KL  +     L+  L    K +EEQL++VCSE PLD+ KN+N   I 
Sbjct: 136  MISTKILTKNEVLKLSFEKIHICLEKYLFF--KTIEEQLEEVCSEHPLDETKNKNGLLIE 193

Query: 4348 IKLKDPRIEVNIPNRIPYSIKDVNEFKEECSQLLAKGIIRESKSPHSAPAFYVENKNEIK 4527
            I+LKDP  E+N+ NRIPY+I+DV EFKEEC  LL KG+IRES+SPHSAPAFYVEN NEIK
Sbjct: 194  IRLKDPLQEINVTNRIPYTIRDVQEFKEECEDLLKKGLIRESQSPHSAPAFYVENHNEIK 253

Query: 4528 RGKRRMVINYKKLNEATIEDSYKLPRKDYILEKIKGNTYFSTFDAKSGYWQLRLAEETKP 4707
            RGKRRMVINYKK+NEATI DSYKLPRKD+ILEKIKG+ +FS+ DAKSGY+QLRL E TKP
Sbjct: 254  RGKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKP 313

Query: 4708 LTAFSCPPQKHYEWNVLPFGLKQAPSIYQRFMDNNLAGLEDICLAYIDDIIVFTKGGEEE 4887
            LTAFSCPPQKHYEWNVL FGLKQAPSIYQRFMD +L GLE ICLAYIDDI++FTKG +E+
Sbjct: 314  LTAFSCPPQKHYEWNVLSFGLKQAPSIYQRFMDQSLKGLEHICLAYIDDILIFTKGSKEQ 373

Query: 4888 HINAVNTVLERIKEKGLILSKNKSHLIKTEVEYLGFKIGKNGILSLSTDVKEKLKLFPDK 5067
            H+N V  VL+RIKEKG+I+SK KS LI+ E+EYLG KI  NG + LS   +EK+  FPD+
Sbjct: 374  HVNDVRIVLQRIKEKGIIISKKKSKLIQQEIEYLGLKIQGNGEIDLSPHTQEKILQFPDE 433

Query: 5068 LEDRKQIQRF 5097
            LEDRKQIQRF
Sbjct: 434  LEDRKQIQRF 443


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
            virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
            Full=Enzymatic polyprotein; Includes: RecName:
            Full=Aspartic protease; Includes: RecName:
            Full=Endonuclease; Includes: RecName: Full=Reverse
            transcriptase gi|32305282|gb|AAP78924.1| putative
            multifunctional pol protein [Cestrum yellow leaf curling
            virus]
          Length = 643

 Score =  468 bits (1203), Expect = e-128
 Identities = 243/442 (54%), Positives = 305/442 (69%), Gaps = 14/442 (3%)
 Frame = +1

Query: 3814 KQRINPYATFIKVKIQNKKIVALIDTSATLCLGNKRILQNWETLEKPLKIIVADKSVHEI 3993
            K + NP ATFI VKI +  I A +DT AT+CL + +I   W  +EKP+KI +ADKSV EI
Sbjct: 2    KSKGNPNATFITVKINDVFINAYVDTGATICLADPKIKLKWVKMEKPIKISIADKSVQEI 61

Query: 3994 WSVGKLVEAEIEKEILIIPTVYQHDSGMDLIIGNNFLKPYQPFIQTNNDTGIHTLKGKRI 4173
            W   ++VE  I     +  TV Q  SGMD +IGNNFL+ YQPFIQ  N   +     K I
Sbjct: 62   WHRAEMVEIWIRNYKFVAATVCQKSSGMDFVIGNNFLRLYQPFIQGLNYIKLRAPLDKDI 121

Query: 4174 TTP----ILKANNLIKLLQQHTKFELQTVLIAT----------QKFLEEQLDKVCSEDPL 4311
              P     +      K+LQ     +LQ +L             +  +   L++VC E+PL
Sbjct: 122  NQPSKMIYIPVTTPSKILQFAILEKLQDILFELHVQENSKTPLELKVSSTLEEVCDENPL 181

Query: 4312 DKDKNRNKEKIIIKLKDPRIEVNIPNRIPYSIKDVNEFKEECSQLLAKGIIRESKSPHSA 4491
            D  KN N E + I+L +P  EVN+PN IPYS++D+NEF +EC+ L+ KGII ESKSPHSA
Sbjct: 182  DV-KNTNTELVKIELINPEKEVNVPNNIPYSLRDINEFSQECADLVRKGIIEESKSPHSA 240

Query: 4492 PAFYVENKNEIKRGKRRMVINYKKLNEATIEDSYKLPRKDYILEKIKGNTYFSTFDAKSG 4671
            PAFYVEN NEIKR KRRMVINYK LN+ATI +++KLPR D IL K+KG+ +FST DAKSG
Sbjct: 241  PAFYVENHNEIKRKKRRMVINYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSG 300

Query: 4672 YWQLRLAEETKPLTAFSCPPQKHYEWNVLPFGLKQAPSIYQRFMDNNLAGLEDICLAYID 4851
            YWQLRL  ++KPLTAFSCPPQKHY+WNVLPFGLKQAP IYQ FMD NL GLE+ CLAYID
Sbjct: 301  YWQLRLHPQSKPLTAFSCPPQKHYQWNVLPFGLKQAPGIYQNFMDKNLEGLENFCLAYID 360

Query: 4852 DIIVFTKGGEEEHINAVNTVLERIKEKGLILSKNKSHLIKTEVEYLGFKIGKNGILSLST 5031
            DI+VFT    EEH++ +  VLER KEKGLILSK K+ + +  +++LG  + +NG + L  
Sbjct: 361  DILVFTNSSREEHLSKLLVVLERCKEKGLILSKKKAIIARQTIDFLGLTLQENGEIKLQP 420

Query: 5032 DVKEKLKLFPDKLEDRKQIQRF 5097
            +V EKL+LFPD +EDRKQ+QRF
Sbjct: 421  NVLEKLELFPDAIEDRKQLQRF 442


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score =  404 bits (1038), Expect = e-109
 Identities = 219/435 (50%), Positives = 292/435 (67%), Gaps = 9/435 (2%)
 Frame = +1

Query: 3820 RINPYATFIKVKIQNKKIVALIDTSATLCLGNKRILQN--WETLEKPLKIIVADKSVHEI 3993
            ++N   TFIK+ I  K I+A IDT A+LCL  +  L    W+ L+KP+ I VADK   +I
Sbjct: 10   QMNQNNTFIKITISQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQI 69

Query: 3994 WSVGKLVEAEIEKEILIIPTVYQHDSGMDLIIGNNFLKPYQPFIQ-----TNNDTGIHTL 4158
              V  ++   IEK   ++PT+YQ DSG+ +IIGNNFL+ Y PF Q     T     +   
Sbjct: 70   TKVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQ 129

Query: 4159 KGKRITTPILKANNLIK--LLQQHTKFELQTVLIATQKFLEEQLDKVCSEDPLDKDKNRN 4332
            K + I  PI  ++ LIK  LL   T  E Q ++    K L+E+     S D L  +KN+N
Sbjct: 130  KQEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLMEQVNKILQERF----SLDLLG-EKNKN 184

Query: 4333 KEKIIIKLKDPRIEVNIPNRIPYSIKDVNEFKEECSQLLAKGIIRESKSPHSAPAFYVEN 4512
            KE I IKLKDP  E+ +PN IPY+ +D+ EFKE+   L+ KG+IR SKSPHSAPAFYVEN
Sbjct: 185  KELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFYVEN 244

Query: 4513 KNEIKRGKRRMVINYKKLNEATIEDSYKLPRKDYILEKIKGNTYFSTFDAKSGYWQLRLA 4692
             +EIKR KRR+VINYK +NEATI     LPR DYI+ ++KG  +FST D KS YWQLRL 
Sbjct: 245  HSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLRLT 304

Query: 4693 EETKPLTAFSCPPQKHYEWNVLPFGLKQAPSIYQRFMDNNLAGLEDICLAYIDDIIVFTK 4872
            EE+KPLTAFS PPQKHYEWNVLP GLKQAP I+Q FM+ +L  LE ICL Y+DDII+F++
Sbjct: 305  EESKPLTAFSYPPQKHYEWNVLPMGLKQAPGIFQEFMNRSLHNLEHICLVYVDDIIIFSE 364

Query: 4873 GGEEEHINAVNTVLERIKEKGLILSKNKSHLIKTEVEYLGFKIGKNGILSLSTDVKEKLK 5052
              + +H++ V  VL+R +++G+ILS+ K+ +   E+++ G  I +  I+ L   + EKL 
Sbjct: 365  KDKNDHLSKVLQVLKRCEDEGIILSQPKAKIAHKEIDFFGLHISEGEII-LQPHILEKLV 423

Query: 5053 LFPDKLEDRKQIQRF 5097
            LFPD++E+RKQ+QRF
Sbjct: 424  LFPDEIENRKQLQRF 438


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  404 bits (1037), Expect = e-109
 Identities = 219/434 (50%), Positives = 291/434 (67%), Gaps = 9/434 (2%)
 Frame = +1

Query: 3823 INPYATFIKVKIQNKKIVALIDTSATLCLGNKRILQN--WETLEKPLKIIVADKSVHEIW 3996
            +N   TFIK+ I  K I+A IDT A+LCL  +  L    W+ L+KP+ I VADK   +I 
Sbjct: 1    MNQNNTFIKITISQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQIT 60

Query: 3997 SVGKLVEAEIEKEILIIPTVYQHDSGMDLIIGNNFLKPYQPFIQ-----TNNDTGIHTLK 4161
             V  ++   IEK   ++PT+YQ DSG+ +IIGNNFL+ Y PF Q     T     +   K
Sbjct: 61   KVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK 120

Query: 4162 GKRITTPILKANNLIK--LLQQHTKFELQTVLIATQKFLEEQLDKVCSEDPLDKDKNRNK 4335
             + I  PI  ++ LIK  LL   T  E Q ++    K L+E+     S D L  +KN+NK
Sbjct: 121  QEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLMEQVNKILQERF----SLDLLG-EKNKNK 175

Query: 4336 EKIIIKLKDPRIEVNIPNRIPYSIKDVNEFKEECSQLLAKGIIRESKSPHSAPAFYVENK 4515
            E I IKLKDP  E+ +PN IPY+ +D+ EFKE+   L+ KG+IR SKSPHSAPAFYVEN 
Sbjct: 176  ELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFYVENH 235

Query: 4516 NEIKRGKRRMVINYKKLNEATIEDSYKLPRKDYILEKIKGNTYFSTFDAKSGYWQLRLAE 4695
            +EIKR KRR+VINYK +NEATI     LPR DYI+ ++KG  +FST D KS YWQLRL E
Sbjct: 236  SEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLRLTE 295

Query: 4696 ETKPLTAFSCPPQKHYEWNVLPFGLKQAPSIYQRFMDNNLAGLEDICLAYIDDIIVFTKG 4875
            E+KPLTAFS PPQKHYEWNVLP GLKQAP I+Q FM+ +L  LE ICL Y+DDII+F++ 
Sbjct: 296  ESKPLTAFSYPPQKHYEWNVLPMGLKQAPGIFQEFMNRSLHNLEHICLVYVDDIIIFSEK 355

Query: 4876 GEEEHINAVNTVLERIKEKGLILSKNKSHLIKTEVEYLGFKIGKNGILSLSTDVKEKLKL 5055
             + +H++ V  VL+R +++G+ILS+ K+ +   E+++ G  I +  I+ L   + EKL L
Sbjct: 356  DKNDHLSKVLQVLKRCEDEGIILSQPKAKIAHKEIDFFGLHISEGEII-LQPHILEKLVL 414

Query: 5056 FPDKLEDRKQIQRF 5097
            FPD++E+RKQ+QRF
Sbjct: 415  FPDEIENRKQLQRF 428


>gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  403 bits (1036), Expect = e-109
 Identities = 219/434 (50%), Positives = 291/434 (67%), Gaps = 9/434 (2%)
 Frame = +1

Query: 3823 INPYATFIKVKIQNKKIVALIDTSATLCLGNKRILQN--WETLEKPLKIIVADKSVHEIW 3996
            +N   TFIK+ I  K I+A IDT A+LCL  +  L    W+ L+KP+ I VADK   +I 
Sbjct: 1    MNQNNTFIKITISQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQIT 60

Query: 3997 SVGKLVEAEIEKEILIIPTVYQHDSGMDLIIGNNFLKPYQPFIQ-----TNNDTGIHTLK 4161
             V  ++   IEK   ++PT+YQ DSG+ +IIGNNFL+ Y PF Q     T     +   K
Sbjct: 61   KVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK 120

Query: 4162 GKRITTPILKANNLIK--LLQQHTKFELQTVLIATQKFLEEQLDKVCSEDPLDKDKNRNK 4335
             + I  PI  ++ LIK  LL   T  E Q ++    K L+E+     S D L  +KN+NK
Sbjct: 121  QEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLMEQVNKILQERF----SLDLLG-EKNKNK 175

Query: 4336 EKIIIKLKDPRIEVNIPNRIPYSIKDVNEFKEECSQLLAKGIIRESKSPHSAPAFYVENK 4515
            E I IKLKDP  E+ +PN IPY+ +D+ EFKE+   L+ KG+IR SKSPHSAPAFYVEN 
Sbjct: 176  ELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFYVENH 235

Query: 4516 NEIKRGKRRMVINYKKLNEATIEDSYKLPRKDYILEKIKGNTYFSTFDAKSGYWQLRLAE 4695
            +EIKR KRR+VINYK +NEATI     LPR DYI+ ++KG  +FST D KS YWQLRL E
Sbjct: 236  SEIKRAKRRIVINYKAMNEATIGTPKTLPRADYIMNRLKGKIWFSTLDVKSAYWQLRLTE 295

Query: 4696 ETKPLTAFSCPPQKHYEWNVLPFGLKQAPSIYQRFMDNNLAGLEDICLAYIDDIIVFTKG 4875
            E+KPLTAFS PPQKHYEWNVLP GLKQAP I+Q FM+ +L  LE ICL Y+DDII+F++ 
Sbjct: 296  ESKPLTAFSYPPQKHYEWNVLPMGLKQAPGIFQEFMNRSLHNLEHICLVYVDDIIIFSEK 355

Query: 4876 GEEEHINAVNTVLERIKEKGLILSKNKSHLIKTEVEYLGFKIGKNGILSLSTDVKEKLKL 5055
             + +H++ V  VL+R +++G+ILS+ K+ +   E+++ G  I +  I+ L   + EKL L
Sbjct: 356  DKNDHLSKVLQVLKRCEDEGIILSQPKAKIAHKEIDFFGLHISEGEII-LQPHILEKLVL 414

Query: 5056 FPDKLEDRKQIQRF 5097
            FPD++E+RKQ+QRF
Sbjct: 415  FPDEIENRKQLQRF 428