BLASTX nr result

ID: Atractylodes21_contig00008217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008217
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   151   5e-34
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              151   5e-34
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   142   2e-31
sp|H3K2Y6.1|MED12_ARATH RecName: Full=Mediator of RNA polymerase...   139   2e-30
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30

>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  151 bits (381), Expect = 5e-34
 Identities = 73/100 (73%), Positives = 79/100 (79%)
 Frame = -1

Query: 301 EEPSLHFKWWYVV*IIKWHHAEGLFLPSLTIDWVMNXXXXXXXXXXXXXXLPIIYGVIET 122
           EEPSLHFKWWYVV I++WHHAEGL LPSL IDW +               LPIIYGVIET
Sbjct: 302 EEPSLHFKWWYVVRILQWHHAEGLILPSLIIDWALRQLQDKELLEILQLLLPIIYGVIET 361

Query: 121 IVLSQNYVRTLVGIAVRFIQEPSPGGSDLVDNSRRAYTIS 2
           +VLSQ YVRTLVG+AVRFI+EPSPGGSDLVDNSRRAYT S
Sbjct: 362 VVLSQTYVRTLVGVAVRFIKEPSPGGSDLVDNSRRAYTSS 401


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  151 bits (381), Expect = 5e-34
 Identities = 73/100 (73%), Positives = 79/100 (79%)
 Frame = -1

Query: 301 EEPSLHFKWWYVV*IIKWHHAEGLFLPSLTIDWVMNXXXXXXXXXXXXXXLPIIYGVIET 122
           EEPSLHFKWWYVV I++WHHAEGL LPSL IDW +               LPIIYGVIET
Sbjct: 302 EEPSLHFKWWYVVRILQWHHAEGLILPSLIIDWALRQLQDKELLEILQLLLPIIYGVIET 361

Query: 121 IVLSQNYVRTLVGIAVRFIQEPSPGGSDLVDNSRRAYTIS 2
           +VLSQ YVRTLVG+AVRFI+EPSPGGSDLVDNSRRAYT S
Sbjct: 362 VVLSQTYVRTLVGVAVRFIKEPSPGGSDLVDNSRRAYTSS 401


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
           putative [Ricinus communis]
          Length = 2264

 Score =  142 bits (358), Expect = 2e-31
 Identities = 66/100 (66%), Positives = 78/100 (78%)
 Frame = -1

Query: 301 EEPSLHFKWWYVV*IIKWHHAEGLFLPSLTIDWVMNXXXXXXXXXXXXXXLPIIYGVIET 122
           EEPSLHFKWWYVV ++ WHH+EGL LPS+ IDWV++              LPIIYGV+++
Sbjct: 304 EEPSLHFKWWYVVRLLHWHHSEGLLLPSIIIDWVLSQLQEKDLLEILQLLLPIIYGVLDS 363

Query: 121 IVLSQNYVRTLVGIAVRFIQEPSPGGSDLVDNSRRAYTIS 2
           +VLSQ YVRTL GIAV +I+EPSPGGSDLVDNSRRAYT S
Sbjct: 364 VVLSQTYVRTLAGIAVHYIREPSPGGSDLVDNSRRAYTTS 403


>sp|H3K2Y6.1|MED12_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
           12; AltName: Full=Protein CENTER CITY; AltName:
           Full=Protein CRYPTIC PRECOCIOUS
           gi|374428817|dbj|BAL49816.1| cryptic precocious
           [Arabidopsis thaliana] gi|374428819|dbj|BAL49817.1|
           cryptic precocious splicing variant [Arabidopsis
           thaliana] gi|374428821|dbj|BAL49818.1| cryptic
           precocious [Arabidopsis thaliana]
          Length = 2235

 Score =  139 bits (350), Expect = 2e-30
 Identities = 64/100 (64%), Positives = 78/100 (78%)
 Frame = -1

Query: 301 EEPSLHFKWWYVV*IIKWHHAEGLFLPSLTIDWVMNXXXXXXXXXXXXXXLPIIYGVIET 122
           EE SLHFKWWY+V +++WHHAEGL  P+L +DWV+               LPI+YGV+E+
Sbjct: 299 EETSLHFKWWYMVRLLQWHHAEGLLFPNLIVDWVLKLLQEKEIFEILQLLLPIVYGVLES 358

Query: 121 IVLSQNYVRTLVGIAVRFIQEPSPGGSDLVDNSRRAYTIS 2
           IVLSQ YV++LV IAVRFIQEP+PGGSDLVDNSRRAYT+S
Sbjct: 359 IVLSQTYVQSLVAIAVRFIQEPAPGGSDLVDNSRRAYTLS 398


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
           predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  138 bits (348), Expect = 3e-30
 Identities = 65/100 (65%), Positives = 77/100 (77%)
 Frame = -1

Query: 301 EEPSLHFKWWYVV*IIKWHHAEGLFLPSLTIDWVMNXXXXXXXXXXXXXXLPIIYGVIET 122
           EEPSLH K WYV  ++ WHHAEGL LPS+ IDWV++              LPI+YGV+ET
Sbjct: 253 EEPSLHLKLWYVARLLHWHHAEGLLLPSVIIDWVLSQLQEKDLLEILQLLLPILYGVLET 312

Query: 121 IVLSQNYVRTLVGIAVRFIQEPSPGGSDLVDNSRRAYTIS 2
           ++LSQ++VRTLVG+AVRFI EPSPGGSDLVDNSRRAYT S
Sbjct: 313 VILSQSFVRTLVGVAVRFIHEPSPGGSDLVDNSRRAYTTS 352


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